Works by Shevchenko, Andrej

Results: 98

A Genome-Scale DNA Repair RNAi Screen Identifies SPG48 as a Novel Gene Associated with Hereditary Spastic Paraplegia.

Published in:

PLoS Biology, 2010, v. 8, n. 6, p. 1, doi. 10.1371/journal.pbio.1000408

By:

Slabicki, Mikolaj;
Theis, Mirko;
Krastev, Dragomir B.;
Samsonov, Sergey;
Mundwiller, Emeline;
Junqueira, Magno;
Paszkowski-Rogacz, Maciej;
Teyra, Joan;
Heninger, Anne-Kristin;
Poser, Ina;
Prieur, Fabienne;
Truchetto, Jérémy;
Confavreux, Christian;
Marelli, Cécilia;
Durr, Alexandra;
Camdessanche, Jean Philippe;
Brice, Alexis;
Shevchenko, Andrej;
Pisabarro, M. Teresa;
Stevanin, Giovanni

Publication type:

Article

Maradolipids: Diacyltrehalose Glycolipids Specific to Dauer Larva in Caenorhabditis elegans.

Published in:

Angewandte Chemie, 2010, v. 122, n. 49, p. 9620, doi. 10.1002/ange.201004466

By:

Penkov, Sider;
Mende, Fanny;
Zagoriy, Vyacheslav;
Erkut, Cihan;
Martin, René;
Pässler, Ulrike;
Schuhmann, Kai;
Schwudke, Dominik;
Gruner, Margit;
Mäntler, Jana;
Reichert-Müller, Thomas;
Shevchenko, Andrej;
Knölker, Hans-Joachim;
Kurzchalia, Teymuras V.

Publication type:

Article

Shedding light on silica biomineralization by comparative analysis of the silica‐associated proteomes from three diatom species.

Published in:

Plant Journal, 2022, v. 110, n. 6, p. 1700, doi. 10.1111/tpj.15765

By:

Skeffington, Alastair W.;
Gentzel, Marc;
Ohara, Andre;
Milentyev, Alexander;
Heintze, Christoph;
Böttcher, Lorenz;
Görlich, Stefan;
Shevchenko, Andrej;
Poulsen, Nicole;
Kröger, Nils

Publication type:

Article

Disrupted Blood-Retina Lysophosphatidylcholine Transport Impairs Photoreceptor Health But Not Visual Signal Transduction.

Published in:

Journal of Neuroscience, 2019, v. 39, n. 49, p. 9689, doi. 10.1523/jneurosci.1142-19.2019

By:

Lobanova, Ekaterina S.;
Schuhmann, Kai;
Finkelstein, Stella;
Lewis, Tylor R.;
Cady, Martha A.;
Ying Hao;
Keuthan, Casey;
Ash, John D.;
Burns, Marie E.;
Shevchenko, Andrej;
Arshavsky, Vadim Y.

Publication type:

Article

The budding yeast proteins Spc24p and Spc25p interact with Ndc80p and Nuf2p at the kinetochore and are important for kinetochore clustering and checkpoint control.

Published in:

EMBO Journal, 2001, v. 20, n. 4, p. 777, doi. 10.1093/emboj/20.4.777

By:

Janke, Carsten;
Ortiz, Jennifer;
Lechner, Johannes;
Shevchenko, Anna;
Shevchenko, Andrej;
M.Magiera, Maria;
Schramm, Carolin;
Schiebel, Elmar

Publication type:

Article

Euplotes telomerase contains an La motif protein produced by apparent translational frameshifting.

Published in:

EMBO Journal, 2000, v. 19, n. 22, p. 6230, doi. 10.1093/emboj/19.22.6230

By:

Aigner, Stefan;
Lingner, Joachinm;
Goodrich, Karen J.;
Grosshans, Cheryl A.;
Shevchenko, Andrej;
Mann, Matthias;
Cech, Thomas R.

Publication type:

Article

The Bbp1p-Mps2p complex connects the SPB to the nuclear envelope and is essential for SPB duplication.

Published in:

EMBO Journal, 2000, v. 19, n. 3, p. 421, doi. 10.1093/emboj/19.3.421

By:

Schramm, Carolin;
Elliott, Sarah;
Shevhenko, Anna;
Shevchenko, Andrej;
Schiebel, Elmar

Publication type:

Article

Compartmentation of protein folding in vivo: sequestration of non-native polypeptide by the chaperonin-GimC system.

Published in:

EMBO Journal, 1999, v. 18, n. 1, p. 75, doi. 10.1093/emboj/18.1.75

By:

Siegers, Katja;
Waldmann, Thomas;
Leroux, Michel R.;
Grein, Katrin;
Shevchenko, Andrej;
Schiebel, Elmar;
Hartl, F. Ulrich

Publication type:

Article

FLICE is activated by association with the CD95 death-inducing signaling complex (DISC).

Published in:

EMBO Journal, 1997, v. 16, n. 10, p. 2794, doi. 10.1093/emboj/16.10.2794

By:

Medema, Jan Paul;
Scaffidi, Carsten;
Kischkel, Frank C.;
Shevchenko, Andrej;
Mann, Matthias;
Krammer, Peter H.;
Peter, Marcus E.

Publication type:

Article

Simplified validation of borderline hits of database searches.

Published in:

Proteomics, 2008, v. 8, n. 20, p. 4173, doi. 10.1002/pmic.200800250

By:

Thomas, Henrik;
Shevchenko, Andrej

Publication type:

Article

Sequence similarity-driven proteomics in organisms with unknown genomes by LC-MS/MS and automated de novo sequencing.

Published in:

Proteomics, 2007, v. 7, n. 14, p. 2318, doi. 10.1002/pmic.200700003

By:

Waridel, Patrice;
Frank, Ari;
Thomas, Henrik;
Surendranath, Vineeth;
Sunyaev, Shamil;
Pevzner, Pavel;
Shevchenko, Andrej

Publication type:

Article

Thermostable trypsin conjugates for high-throughput proteomics: synthesis and performance evaluation.

Published in:

Proteomics, 2006, v. 6, n. 10, p. 2959, doi. 10.1002/pmic.200500576

By:

Marek Šebela;
Tat'ána Štosová;
Jan Havliš;
Natalie Wielsch;
Henrik Thomas;
Zbyněk Zdráhal;
Andrej Shevchenko

Publication type:

Article

Error-tolerant EST database searches by tandem mass spectrometry and multiTag software.

Published in:

Proteomics, 2005, v. 5, n. 16, p. 4118, doi. 10.1002/pmic.200401262

By:

Adam 4;J. Liska;
Shamil Sunyaev;
Ignat 4;N. Shilov;
Dan 4;A. Schaeffer;
Andrej Shevchenko

Publication type:

Article

Homology-based functional proteomics by mass spectrometry: Application to the Xenopus microtubule-associated proteome.

Published in:

Proteomics, 2004, v. 4, n. 9, p. 2707, doi. 10.1002/pmic.200300813

By:

Adam J. Liska;
Andrei V. Popov;
Shamil Sunyaev;
Peg Coughlin;
Bianca Habermann;
Anna Shevchenko;
Peer Bork;
Eric Karsenti;
Andrej Shevchenko

Publication type:

Article

Expanding the organismal scope of proteomics: Cross-species protein identification by mass spectrometry and its implications.

Published in:

Proteomics, 2003, v. 3, n. 1, p. 19, doi. 10.1002/pmic.200390004

By:

Liska, Adam J.;
Shevchenko, Andrej

Publication type:

Article

Hepatic Hedgehog Signaling Participates in the Crosstalk between Liver and Adipose Tissue in Mice by Regulating FGF21.

Published in:

Cells (2073-4409), 2022, v. 11, n. 10, p. 1680, doi. 10.3390/cells11101680

By:

Ott, Fritzi;
Körner, Christiane;
Werner, Kim;
Gericke, Martin;
Liebscher, Ines;
Lobsien, Donald;
Radrezza, Silvia;
Shevchenko, Andrej;
Hofmann, Ute;
Kratzsch, Jürgen;
Gebhardt, Rolf;
Berg, Thomas;
Matz-Soja, Madlen

Publication type:

Article

Phosphoinositide Profile of the Mouse Retina.

Published in:

Cells (2073-4409), 2020, v. 9, n. 6, p. 1417, doi. 10.3390/cells9061417

By:

Finkelstein, Stella;
Gospe III, Sidney M.;
Schuhmann, Kai;
Shevchenko, Andrej;
Arshavsky, Vadim Y.;
Lobanova, Ekaterina S.

Publication type:

Article

The histone 3 lysine 36 methyltransferase, SET2, is involved in transcriptional elongation.

Published in:

Nucleic Acids Research, 2003, v. 31, n. 10, p. 2475, doi. 10.1093/nar/gkg372

By:

Schaft, Daniel;
Roguev, Assen;
Kotovic, Kimberly M.;
Shevchenko, Anna;
Sarov, Mihail;
Shevchenko, Andrej;
Neugebauer, Karla M.;
Stewart, A. Francis

Publication type:

Article

Quality control requirements for the correct annotation of lipidomics data.

Published in:

2021

By:

Köfeler, Harald C.;
Eichmann, Thomas O.;
Ahrends, Robert;
Bowden, John A.;
Danne-Rasche, Niklas;
Dennis, Edward A.;
Fedorova, Maria;
Griffiths, William J.;
Han, Xianlin;
Hartler, Jürgen;
Holčapek, Michal;
Jirásko, Robert;
Koelmel, Jeremy P.;
Ejsing, Christer S.;
Liebisch, Gerhard;
Ni, Zhixu;
O'Donnell, Valerie B.;
Quehenberger, Oswald;
Schwudke, Dominik;
Shevchenko, Andrej

Publication type:

Letter

PSI1 is responsible for the stearic acid enrichment that is characteristic of phosphatidylinositol in yeast.

Published in:

FEBS Journal, 2009, v. 276, n. 21, p. 6412, doi. 10.1111/j.1742-4658.2009.07355.x

By:

Le Guédard, Marina;
Bessoule, Jean-Jacques;
Boyer, Valérie;
Ayciriex, Sophie;
Velours, Gisèle;
Kulik, Willem;
Ejsing, Christer S.;
Shevchenko, Andrej;
Coulon, Denis;
Lessire, Ren;
Testet, Eric

Publication type:

Article

A Global <i>In Vivo Drosophila</i> RNAi Screen Identifies a Key Role of Ceramide Phosphoethanolamine for Glial Ensheathment of Axons.

Published in:

PLoS Genetics, 2013, v. 9, n. 12, p. 1, doi. 10.1371/journal.pgen.1003980

By:

Ghosh, Aniket;
Kling, Tina;
Snaidero, Nicolas;
Sampaio, Julio L.;
Shevchenko, Andrej;
Gras, Heribert;
Geurten, Bart;
Göpfert, Martin C.;
Schulz, Jörg B.;
Voigt, Aaron;
Simons, Mikael

Publication type:

Article

Lipoproteins in Drosophila melanogaster--Assembly, Function, and Influence on Tissue Lipid Composition.

Published in:

PLoS Genetics, 2012, v. 8, n. 7, p. 1, doi. 10.1371/journal.pgen.1002828

By:

Palm, Wilhelm;
Sampaio, Julio L.;
Brankatschk, Marko;
Carvalho, Maria;
Mahmoud, Ali;
Shevchenko, Andrej;
Eaton, Suzanne

Publication type:

Article

The Schizosaccharomyces pombe JmjC-Protein, Msc1, Prevents H2A.Z Localization in Centromeric and Subtelomeric Chromatin Domains.

Published in:

PLoS Genetics, 2009, v. 5, n. 11, p. 1, doi. 10.1371/journal.pgen.1000726

By:

Buchanan, Luke;
Durand-Dubief, Mickaël;
Roguev, Assen;
Sakalar, Cagri;
Wilhelm, Brian;
Strålfors, Annelie;
Shevchenko, Anna;
Aasland, Rein;
Shevchenko, Andrej;
Ekwall, Karl;
Stewart, A. Francis

Publication type:

Article

“De novo” sequencing of peptides recovered from in-gel digested proteins by nanoelectrospray tandem mass spectrometry.

Published in:

Molecular Biotechnology, 2002, v. 20, n. 1, p. 107, doi. 10.1385/MB:20:1:107

By:

Shevchenko, Andrej;
Chernushevich, Igor;
Shevchenko, Anna;
Wilm, Matthias;
Mann, Matthias

Publication type:

Article

Open sesame: Identification of sesame oil and oil soot ink in organic deposits of Tang Dynasty lamps from Astana necropolis in China.

Published in:

PLoS ONE, 2017, v. 12, n. 2, p. 1, doi. 10.1371/journal.pone.0158636

By:

Shevchenko, Anna;
Yang, Yimin;
Knaust, Andrea;
Verbavatz, Jean-Marc;
Mai, Huijuan;
Wang, Bo;
Wang, Changsui;
Shevchenko, Andrej

Publication type:

Article

Detection of Independent Associations of Plasma Lipidomic Parameters with Insulin Sensitivity Indices Using Data Mining Methodology.

Published in:

PLoS ONE, 2016, v. 11, n. 10, p. 1, doi. 10.1371/journal.pone.0164173

By:

Kopprasch, Steffi;
Dheban, Srirangan;
Schuhmann, Kai;
Xu, Aimin;
Schulte, Klaus-Martin;
Simeonovic, Charmaine J.;
Schwarz, Peter E. H.;
Bornstein, Stefan R.;
Shevchenko, Andrej;
Graessler, Juergen

Publication type:

Article

Maradolipids: Diacyltrehalose Glycolipids Specific to Dauer Larva in Caenorhabditis elegans.

Published in:

Angewandte Chemie International Edition, 2010, v. 49, n. 49, p. 9430, doi. 10.1002/anie.201004466

By:

Penkov, Sider;
Mende, Fanny;
Zagoriy, Vyacheslav;
Erkut, Cihan;
Martin, René;
Pässler, Ulrike;
Schuhmann, Kai;
Schwudke, Dominik;
Gruner, Margit;
Mäntler, Jana;
Reichert-Müller, Thomas;
Shevchenko, Andrej;
Knölker, Hans-Joachim;
Kurzchalia, Teymuras V.

Publication type:

Article

Eye proteome of Drosophila melanogaster.

Published in:

Proteomics, 2024, v. 24, n. 10, p. 1, doi. 10.1002/pmic.202300330

By:

Kumar, Mukesh;
Has, Canan;
Lam‐Kamath, Khanh;
Ayciriex, Sophie;
Dewett, Deepshe;
Bashir, Mhamed;
Poupault, Clara;
Schuhmann, Kai;
Thomas, Henrik;
Knittelfelder, Oskar;
Raghuraman, Bharath Kumar;
Ahrends, Robert;
Rister, Jens;
Shevchenko, Andrej

Publication type:

Article

Absolute Quantification of Proteins in the Eye of Drosophila melanogaster.

Published in:

Proteomics, 2020, v. 20, n. 23, p. 1, doi. 10.1002/pmic.201900049

By:

Raghuraman, Bharath Kumar;
Hebbar, Sarita;
Kumar, Mukesh;
Moon, HongKee;
Henry, Ian;
Knust, Elisabeth;
Shevchenko, Andrej

Publication type:

Article

Proteome and phosphoproteome of Africanized and European honeybee venoms.

Published in:

Proteomics, 2013, v. 13, n. 17, p. 2638, doi. 10.1002/pmic.201300038

By:

Resende, Virgínia Maria Ferreira;
Vasilj, Andrej;
Santos, Keity Souza;
Palma, Mario Sergio;
Shevchenko, Andrej

Publication type:

Article

Segregation of sphingolipids and sterols during formation of secretory vesicles at the trans-Golgi network.

Published in:

Journal of Cell Biology, 2009, v. 185, n. 4, p. 601, doi. 10.1083/jcb.200901145

By:

Klemm, Robin W.;
Ejsing, Christer S.;
Surma, Michal A.;
Kaiser, Hermann-Josef;
Gerl, Mathias J.;
Sampaio, Julio L.;
de Robillard, Quentin;
Ferguson, Charles;
Proszynski, Tomasz J.;
Shevchenko, Andrej;
Simons, Kai

Publication type:

Article

Hormone-sensitive lipase couples intergenerational sterol metabolism to reproductive success.

Published in:

eLife, 2021, p. 1, doi. 10.7554/eLife.63252

By:

Heier, Christoph;
Knittelfelder, Oskar;
Hofbauer, Harald F.;
Mende, Wolfgang;
Pörnbacher, Ingrid;
Schiller, Laura;
Schoiswohl, Gabriele;
Hao Xie;
Grönke, Sebastian;
Shevchenko, Andrej;
Kühnlein, Ronald P.

Publication type:

Article

Glycosphingolipid Requirements for Endosome-to-Golgi Transport of Shiga Toxin.

Published in:

Traffic, 2009, v. 10, n. 7, p. 868, doi. 10.1111/j.1600-0854.2009.00919.x

By:

Raa, Hilde;
Grimmer, Stine;
Schwudke, Dominik;
Bergan, Jonas;
Wälchli, Sébastien;
Skotland, Tore;
Shevchenko, Andrej;
Sandvig, Kirsten

Publication type:

Article

Dried-droplet probe preparation on AnchorChip™ targets for navigating the acquisition of matrix-assisted laser desorption/ionization time-of-flight spectra by fluorescence of matrix/analyte crystals.

Published in:

Rapid Communications in Mass Spectrometry: RCM, 2004, v. 18, n. 9, p. 923, doi. 10.1002/rcm.1427

By:

Thomas, Henrik;
Havliš, Jan;
Peychl, Jan;
Shevchenko, Andrej

Publication type:

Article

Simple two-point calibration of hybrid quadrupole time-of-flight instruments using a synthetic lipid standard.

Published in:

Rapid Communications in Mass Spectrometry: RCM, 2002, v. 16, n. 12, p. 1254, doi. 10.1002/rcm.705

By:

Ekroos, Kim;
Shevchenko, Andrej

Publication type:

Article

Rapid ' de novo' peptide sequencing by a combination of nanoelectrospray, isotopic labeling and a quadrupole/time-of-flight mass spectrometer.

Published in:

Rapid Communications in Mass Spectrometry: RCM, 1997, v. 11, n. 9, p. 1015, doi. 10.1002/(SICI)1097-0231(19970615)11:9<1015::AID-RCM958>3.0.CO;2-H

By:

Shevchenko, Andrej;
Chernushevich, Igor;
Ens, Werner;
Standing, Kenneth G.;
Thomson, Bruce;
Wilm, Matthias;
Mann, Matthias

Publication type:

Article

Steroid Hormone Signaling Is Essential for Pheromone Production and Oenocyte Survival.

Published in:

PLoS Genetics, 2016, v. 12, n. 6, p. 1, doi. 10.1371/journal.pgen.1006126

By:

Chiang, Yin Ning;
Tan, Kah Junn;
Chung, Henry;
Lavrynenko, Oksana;
Shevchenko, Andrej;
Yew, Joanne Y.

Publication type:

Article

Assigning spectrum-specific P-values to protein identifications by mass spectrometry.

Published in:

Bioinformatics, 2011, v. 27, n. 8, p. 1128, doi. 10.1093/bioinformatics/btr089

By:

Spirin, Victor;
Shpunt, Alexander;
Seebacher, Jan;
Gentzel, Marc;
Shevchenko, Andrej;
Gygi, Steven;
Sunyaev, Shamil

Publication type:

Article

Role for Rif1 in the checkpoint response to damaged DNA in Xenopus egg extracts.

Published in:

Cell Cycle, 2012, v. 11, n. 6, p. 1183, doi. 10.4161/cc.11.6.19636

By:

Kumar, Sanjay;
Hae Yong Yoo;
Kumagai, Akiko;
Shevchenko, Anna;
Shevchenko, Andrej;
Dunphy, William G.

Publication type:

Article

Ontogenetic variations in the venom proteome of the Amazonian snake Bothrops atrox.

Published in:

Proteome Science, 2006, v. 4, p. 1, doi. 10.1186/1477-5956-4-11

By:

Guércio, Rafael A. P.;
Shevchenko, Anna;
Shevchenko, Andrej;
López-Lozano, Jorge L.;
Paba, Jaime;
Sousa, Marcelo V.;
Ricart, Carlos A. O.

Publication type:

Article

Proteomics of early zebrafish embryos.

Published in:

BMC Developmental Biology, 2006, v. 6, p. 1, doi. 10.1186/1471-213X-6-1

By:

Link, Vinzenz;
Shevchenko, Andrej;
Heisenberg, Carl-Philipp

Publication type:

Article

A metabolic switch regulates the transition between growth and diapause in C. elegans.

Published in:

BMC Biology, 2020, v. 18, n. 1, p. 1, doi. 10.1186/s12915-020-0760-3

By:

Penkov, Sider;
Raghuraman, Bharath Kumar;
Erkut, Cihan;
Oertel, Jana;
Galli, Roberta;
Ackerman, Eduardo Jacobo Miranda;
Vorkel, Daniela;
Verbavatz, Jean-Marc;
Koch, Edmund;
Fahmy, Karim;
Shevchenko, Andrej;
Kurzchalia, Teymuras V.

Publication type:

Article

RNAi in murine hepatocytes: the agony of choice-a study of the influence of lipid-based transfection reagents on hepatocyte metabolism.

Published in:

Archives of Toxicology, 2015, v. 89, n. 9, p. 1579, doi. 10.1007/s00204-015-1571-0

By:

Böttger, Jan;
Arnold, Katrin;
Thiel, Carlo;
Rennert, Christiane;
Aleithe, Susanne;
Hofmann, Ute;
Vlaic, Sebastian;
Sales, Susanne;
Shevchenko, Andrej;
Matz-Soja, Madlen

Publication type:

Article

Femtomole sequencing of proteins from polyacrylamide gels by nano-electrospray mass spectrometry.

Published in:

Nature, 1996, v. 379, n. 6564, p. 466, doi. 10.1038/379466a0

By:

Wilm, Matthias;
Shevchenko, Andrej

Publication type:

Article

Endocrinology. Purification of a candidate gonadotrophin surge attenuating factor from human follicular fluid.

Published in:

Human Reproduction, 1999, v. 14, n. 6, p. 1449, doi. 10.1093/humrep/14.6.1449

By:

Pappa, Aglaia;
Seferiadis, Konstantin;
Fotsis, Theodore;
Shevchenko, Andrej;
Marselos, Marios;
Tsolas, Orestes;
E.Messinis, Ioannis

Publication type:

Article

Exogenous ethanol induces a metabolic switch that prolongs the survival of Caenorhabditis elegans dauer larva and enhances its resistance to desiccation.

Published in:

Aging Cell, 2020, v. 19, n. 10, p. 1, doi. 10.1111/acel.13214

By:

Kaptan, Damla;
Penkov, Sider;
Zhang, Xingyu;
Gade, Vamshidhar R.;
Raghuraman, Bharath Kumar;
Galli, Roberta;
Sampaio, Júlio L.;
Haase, Robert;
Koch, Edmund;
Shevchenko, Andrej;
Zaburdaev, Vasily;
Kurzchalia, Teymuras V.

Publication type:

Article

Hydroxylated sphingolipid biosynthesis regulates photoreceptor apical domain morphogenesis.

Published in:

Journal of Cell Biology, 2020, v. 219, n. 12, p. 1, doi. 10.1083/jcb.201911100

By:

Hebbar, Sarita;
Schuhmann, Kai;
Shevchenko, Andrej;
Knust, Elisabeth

Publication type:

Article

Cycling of the signaling protein phospholipase D through cilia requires the BBSome only for the export phase.

Published in:

Journal of Cell Biology, 2013, v. 201, n. 2, p. 249, doi. 10.1083/jcb.201207139

By:

Lechtreck, Karl F.;
Brown, Jason M.;
Sampaio, Julio L.;
Craft, Julie M.;
Shevchenko, Andrej;
Evans, James E.;
Witman, George B.

Publication type:

Article

Quantitative analysis of the lipidomes of the influenza virus envelope and MDCK cell apical membrane.

Published in:

Journal of Cell Biology, 2012, v. 196, n. 2, p. 213, doi. 10.1083/jcb.201108175

By:

Gerl, Mathias J.;
Sampaio, Julio L.;
Urban, Severino;
Kalvodova, Lucie;
Verbavatz, Jean-Marc;
Binnington, Beth;
Lindemann, Dirk;
Lingwood, Clifford A.;
Shevchenko, Andrej;
Schroeder, Cornelia;
Simons, Kai

Publication type:

Article

Direct regulation of Treslin by cyclin-dependent kinase is essential for the onset of DNA replication.

Published in:

Journal of Cell Biology, 2011, v. 193, n. 6, p. 995, doi. 10.1083/jcb.201102003

By:

Kumagai, Akiko;
Shevchenko, Anna;
Shevchenko, Andrej;
Dunphy, William G.

Publication type:

Article