Found: 15
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Accurate assembly of multiple RNA-seq samples with Aletsch.
- Published in:
- Bioinformatics, 2024, v. 40, p. i307, doi. 10.1093/bioinformatics/btae215
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- Article
Learning locality-sensitive bucketing functions.
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- Bioinformatics, 2024, v. 40, p. i318, doi. 10.1093/bioinformatics/btae228
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- Article
Transcript assembly and annotations: Bias and adjustment.
- Published in:
- PLoS Computational Biology, 2023, v. 19, n. 12, p. 1, doi. 10.1371/journal.pcbi.1011734
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- Article
Locality-sensitive bucketing functions for the edit distance.
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- Algorithms for Molecular Biology, 2023, v. 18, n. 1, p. 1, doi. 10.1186/s13015-023-00234-2
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- Article
Seeding with minimized subsequence.
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- Bioinformatics, 2023, v. 39, p. i232, doi. 10.1093/bioinformatics/btad218
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- Article
Context-aware seeds for read mapping.
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- Algorithms for Molecular Biology, 2020, v. 15, n. 1, p. 1, doi. 10.1186/s13015-020-00172-3
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- Article
Quantifying the benefit offered by transcript assembly with Scallop-LR on single-molecule long reads.
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- Genome Biology, 2019, v. 20, n. 1, p. 1, doi. 10.1186/s13059-019-1883-0
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- Article
SQUID: transcriptomic structural variation detection from RNA-seq.
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- Genome Biology, 2018, v. 19, n. 1, p. N.PAG, doi. 10.1186/s13059-018-1421-5
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- Article
Accurate assembly of transcripts through phase-preserving graph decomposition.
- Published in:
- Nature Biotechnology, 2017, v. 35, n. 12, p. 1167, doi. 10.1038/nbt.4020
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- Article
DeepBound: accurate identification of transcript boundaries via deep convolutional neural fields.
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- Bioinformatics, 2017, v. 33, n. 14, p. i267, doi. 10.1093/bioinformatics/btx267
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- Article
A maximum-likelihood approach for building cell-type trees by lifting.
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- BMC Genomics, 2016, v. 17, p. 33, doi. 10.1186/s12864-015-2297-3
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- Article
Comparing genomes with rearrangements and segmental duplications.
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- Bioinformatics, 2015, v. 31, n. 12, p. i329, doi. 10.1093/bioinformatics/btv229
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- Article
Sorting genomes with rearrangements and segmental duplications through trajectory graphs.
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- BMC Bioinformatics, 2013, v. 14, n. Suppl 15, p. 1, doi. 10.1186/1471-2105-14-S15-S9
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- Article
Approximating the edit distance for genomes with duplicate genes under DCJ, insertion and deletion.
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- BMC Bioinformatics, 2012, v. 13, n. Suppl 19, p. 1, doi. 10.1186/1471-2105-13-S19-S13
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- Article
Incorporating Ab Initio energy into threading approaches for protein structure prediction.
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- BMC Bioinformatics, 2011, v. 12, n. Suppl 1, p. 1, doi. 10.1186/1471-2105-12-S1-S54
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- Article