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Predicting implicit associated cancer genes from OMIM and MEDLINE by a new probabilistic model.
- Published in:
- 2007
- By:
- Publication type:
- Abstract
ARG-SHINE: improve antibiotic resistance class prediction by integrating sequence homology, functional information and deep convolutional neural network.
- Published in:
- NAR Genomics & Bioinformatics, 2021, v. 3, n. 3, p. 1, doi. 10.1093/nargab/lqab066
- By:
- Publication type:
- Article
MetaMHC: a meta approach to predict peptides binding to MHC molecules.
- Published in:
- Nucleic Acids Research, 2010, v. 38, n. suppl_2, p. W474, doi. 10.1093/nar/gkq407
- By:
- Publication type:
- Article
ICH-LR2S2: a new risk score for predicting stroke-associated pneumonia from spontaneous intracerebral hemorrhage.
- Published in:
- 2022
- By:
- Publication type:
- journal article
Deep sequencing of HBV pre-S region reveals high heterogeneity of HBV genotypes and associations of word pattern frequencies with HCC.
- Published in:
- PLoS Genetics, 2018, v. 14, n. 2, p. 1, doi. 10.1371/journal.pgen.1007206
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- Publication type:
- Article
GORetriever: reranking protein-description-based GO candidates by literature-driven deep information retrieval for protein function annotation.
- Published in:
- Bioinformatics, 2024, v. 40, p. ii53, doi. 10.1093/bioinformatics/btae401
- By:
- Publication type:
- Article
DeepMHCI: an anchor position-aware deep interaction model for accurate MHC-I peptide binding affinity prediction.
- Published in:
- Bioinformatics, 2023, v. 39, n. 9, p. 1, doi. 10.1093/bioinformatics/btad551
- By:
- Publication type:
- Article
DeepMHCII: a novel binding core-aware deep interaction model for accurate MHC-II peptide binding affinity prediction.
- Published in:
- Bioinformatics, 2022, v. 38, p. i220, doi. 10.1093/bioinformatics/btac225
- By:
- Publication type:
- Article
HPODNets: deep graph convolutional networks for predicting human protein–phenotype associations.
- Published in:
- Bioinformatics, 2022, v. 38, n. 3, p. 799, doi. 10.1093/bioinformatics/btab729
- By:
- Publication type:
- Article
HPOFiller: identifying missing protein–phenotype associations by graph convolutional network.
- Published in:
- Bioinformatics, 2021, v. 37, n. 19, p. 3328, doi. 10.1093/bioinformatics/btab224
- By:
- Publication type:
- Article
DeepGraphGO: graph neural network for large-scale, multispecies protein function prediction.
- Published in:
- Bioinformatics, 2021, v. 37, p. i262, doi. 10.1093/bioinformatics/btab270
- By:
- Publication type:
- Article
BERTMeSH: deep contextual representation learning for large-scale high-performance MeSH indexing with full text.
- Published in:
- Bioinformatics, 2021, v. 37, n. 5, p. 684, doi. 10.1093/bioinformatics/btaa837
- By:
- Publication type:
- Article
Toward more accurate pan-specific MHC-peptide binding prediction: a review of current methods and tools.
- Published in:
- Briefings in Bioinformatics, 2012, v. 13, n. 3, p. 350, doi. 10.1093/bib/bbr060
- By:
- Publication type:
- Article
Towards accurate human promoter recognition: a review of currently used sequence features and classification methods.
- Published in:
- Briefings in Bioinformatics, 2009, v. 10, n. 5, p. 498, doi. 10.1093/bib/bbp027
- By:
- Publication type:
- Article
Effective binning of metagenomic contigs using contrastive multi-view representation learning.
- Published in:
- Nature Communications, 2024, v. 15, n. 1, p. 1, doi. 10.1038/s41467-023-44290-z
- By:
- Publication type:
- Article
TEPITOPEpan: Extending TEPITOPE for Peptide Binding Prediction Covering over 700 HLA-DR Molecules.
- Published in:
- PLoS ONE, 2012, v. 7, n. 2, p. 1, doi. 10.1371/journal.pone.0030483
- By:
- Publication type:
- Article
Sparse logistic regression revealed the associations between HBV PreS quasispecies and hepatocellular carcinoma.
- Published in:
- Virology Journal, 2022, v. 19, n. 1, p. 1, doi. 10.1186/s12985-022-01836-9
- By:
- Publication type:
- Article
Humidity‐Driven Dynamic Based on Polystyrene‐Contained Gelatin (Gel‐PS) and PDMS Bilayer Wrinkling System.
- Published in:
- Advanced Functional Materials, 2023, v. 33, n. 37, p. 1, doi. 10.1002/adfm.202301850
- By:
- Publication type:
- Article
Multiconstrained gene clustering based ongeneralized projections.
- Published in:
- BMC Bioinformatics, 2010, v. 11, p. 164, doi. 10.1186/1471-2105-11-164
- By:
- Publication type:
- Article
Phen2Disease: a phenotype-driven model for disease and gene prioritization by bidirectional maximum matching semantic similarities.
- Published in:
- Briefings in Bioinformatics, 2023, v. 24, n. 4, p. 1, doi. 10.1093/bib/bbad172
- By:
- Publication type:
- Article
META-DDIE: predicting drug–drug interaction events with few-shot learning.
- Published in:
- Briefings in Bioinformatics, 2022, v. 23, n. 1, p. 1, doi. 10.1093/bib/bbab514
- By:
- Publication type:
- Article
Corrigendum to: Assessment of metagenomic assemblers based on hybrid reads of real and simulated metagenomic sequences.
- Published in:
- Briefings in Bioinformatics, 2021, v. 22, n. 1, p. 611, doi. 10.1093/bib/bbaa085
- By:
- Publication type:
- Article
Assessment of metagenomic assemblers based on hybrid reads of real and simulated metagenomic sequences.
- Published in:
- Briefings in Bioinformatics, 2020, v. 21, n. 3, p. 777, doi. 10.1093/bib/bbz025
- By:
- Publication type:
- Article
Similarity-based machine learning methods for predicting drug–target interactions: a brief review.
- Published in:
- Briefings in Bioinformatics, 2014, v. 15, n. 5, p. 734, doi. 10.1093/bib/bbt056
- By:
- Publication type:
- Article
MetaBinner: a high-performance and stand-alone ensemble binning method to recover individual genomes from complex microbial communities.
- Published in:
- Genome Biology, 2023, v. 24, n. 1, p. 1, doi. 10.1186/s13059-022-02832-6
- By:
- Publication type:
- Article
SOCIAL CHOICE FOR DATA FUSION.
- Published in:
- International Journal of Information Technology & Decision Making, 2004, v. 3, n. 4, p. 619, doi. 10.1142/S0219622004001288
- By:
- Publication type:
- Article
HPOAnnotator: improving large-scale prediction of HPO annotations by low-rank approximation with HPO semantic similarities and multiple PPI networks.
- Published in:
- BMC Medical Genomics, 2019, v. 12, p. 1, doi. 10.1186/s12920-019-0625-1
- By:
- Publication type:
- Article
Improving MHC binding peptide prediction by incorporating binding data of auxiliary MHC molecules.
- Published in:
- Bioinformatics, 2006, v. 22, n. 13, p. 1648, doi. 10.1093/bioinformatics/btl141
- By:
- Publication type:
- Article
A probabilistic model for mining implicit 'chemical compound–gene' relations from literature.
- Published in:
- Bioinformatics, 2005, v. 21, p. ii245, doi. 10.1093/bioinformatics/bti1141
- By:
- Publication type:
- Article
NetGO 2.0: improving large-scale protein function prediction with massive sequence, text, domain, family and network information.
- Published in:
- Nucleic Acids Research, 2021, v. 49, n. W1, p. W469, doi. 10.1093/nar/gkab398
- By:
- Publication type:
- Article
NetGO: improving large-scale protein function prediction with massive network information.
- Published in:
- Nucleic Acids Research, 2019, v. 47, n. W1, p. W379, doi. 10.1093/nar/gkz388
- By:
- Publication type:
- Article
On computational complexity of membership test in flow games and linear production games.
- Published in:
- International Journal of Game Theory, 2002, v. 31, n. 1, p. 39, doi. 10.1007/s001820200106
- By:
- Publication type:
- Article
GoSum: extractive summarization of long documents by reinforcement learning and graph-organized discourse state.
- Published in:
- Knowledge & Information Systems, 2024, v. 66, n. 12, p. 7557, doi. 10.1007/s10115-024-02195-3
- By:
- Publication type:
- Article
Using Quasispecies Patterns of Hepatitis B Virus to Predict Hepatocellular Carcinoma With Deep Sequencing and Machine Learning.
- Published in:
- 2021
- By:
- Publication type:
- journal article
MHC2MIL: a novel multiple instance learning based method for MHC-II peptide binding prediction by considering peptide flanking region and residue positions.
- Published in:
- BMC Genomics, 2014, v. 15, p. 1, doi. 10.1186/1471-2164-15-S9-S9
- By:
- Publication type:
- Article
MHC2SKpan: a novel kernel based approach for pan-specific MHC class II peptide binding prediction.
- Published in:
- BMC Genomics, 2013, v. 14, p. 1, doi. 10.1186/1471-2164-14-S5-S11
- By:
- Publication type:
- Article
MeSHSim: An R/Bioconductor package for measuring semantic similarity over MeSH headings and MEDLINE documents.
- Published in:
- Journal of Bioinformatics & Computational Biology, 2015, v. 13, n. 6, p. 1, doi. 10.1142/S0219720015420020
- By:
- Publication type:
- Article
HPOLabeler: improving prediction of human protein–phenotype associations by learning to rank.
- Published in:
- Bioinformatics, 2020, v. 36, n. 14, p. 4180, doi. 10.1093/bioinformatics/btaa284
- By:
- Publication type:
- Article
FullMeSH: improving large-scale MeSH indexing with full text.
- Published in:
- Bioinformatics, 2020, v. 36, n. 5, p. 1533, doi. 10.1093/bioinformatics/btz756
- By:
- Publication type:
- Article
SolidBin: improving metagenome binning with semi-supervised normalized cut.
- Published in:
- Bioinformatics, 2019, v. 35, n. 21, p. 4229, doi. 10.1093/bioinformatics/btz253
- By:
- Publication type:
- Article
GOLabeler: improving sequence-based large-scale protein function prediction by learning to rank.
- Published in:
- Bioinformatics, 2018, v. 34, n. 14, p. 2465, doi. 10.1093/bioinformatics/bty130
- By:
- Publication type:
- Article
DrugE-Rank: improving drug-target interaction prediction of new candidate drugs or targets by ensemble learning to rank.
- Published in:
- Bioinformatics, 2016, v. 32, n. 12, p. i18, doi. 10.1093/bioinformatics/btw244
- By:
- Publication type:
- Article
DeepMeSH: deep semantic representation for improving large-scale MeSH indexing.
- Published in:
- Bioinformatics, 2016, v. 32, n. 12, p. i70, doi. 10.1093/bioinformatics/btw294
- By:
- Publication type:
- Article
MeSHLabeler: improving the accuracy of large-scale MeSH indexing by integrating diverse evidence.
- Published in:
- Bioinformatics, 2015, v. 31, n. 12, p. i339, doi. 10.1093/bioinformatics/btv237
- By:
- Publication type:
- Article
Enhancing MEDLINE document clustering by incorporating MeSH semantic similarity.
- Published in:
- Bioinformatics, 2009, v. 25, n. 15, p. 1944, doi. 10.1093/bioinformatics/btp338
- By:
- Publication type:
- Article
Linear and Integer Programming Techniques for Cooperative Games.
- Published in:
- International Journal of Foundations of Computer Science, 2002, v. 13, n. 5, p. 653, doi. 10.1142/S0129054102001357
- By:
- Publication type:
- Article