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Comparative analysis and classification of highly divergent mouse rDNA units based on their intergenic spacer (IGS) variability.
- Published in:
- NAR Genomics & Bioinformatics, 2024, v. 6, n. 2, p. 1, doi. 10.1093/nargab/lqae070
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- Publication type:
- Article
Association of Polymorphisms in Odorant-Binding Protein Genes With Variation in Olfactory Response to Benzaldehyde in Drosophila.
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- Genetics, 2007, v. 177, n. 3, p. 1655, doi. 10.1534/genetics.107.079731
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- Publication type:
- Article
Persistence Time of Loss-of-Function Mutations at Nonessential Lock Affecting Eye Color in Drosophila melanogaster.
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- Genetics, 2005, v. 171, n. 4, p. 2133, doi. 10.1534/genetics.105.046094
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- Publication type:
- Article
Diverse functions of homologous actin isoforms are defined by their nucleotide, rather than their amino acid sequence.
- Published in:
- eLife, 2017, p. 1, doi. 10.7554/eLife.31661
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- Publication type:
- Article
Role of mRNA structure in the control of protein folding.
- Published in:
- Nucleic Acids Research, 2016, v. 44, n. 22, p. 10898, doi. 10.1093/nar/gkw671
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- Publication type:
- Article
Evolution at protein ends: major contribution of alternative transcription initiation and termination to the transcriptome and proteome diversity in mammals.
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- Nucleic Acids Research, 2014, v. 42, n. 11, p. 7132, doi. 10.1093/nar/gku342
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- Publication type:
- Article
Sounds of silence: synonymous nucleotides as a key to biological regulation and complexity.
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- Nucleic Acids Research, 2013, v. 41, n. 4, p. 2073, doi. 10.1093/nar/gks1205
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- Publication type:
- Article
Disruptive mRNA folding increases translational efficiency of catechol-O-methyltransferase variant.
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- Nucleic Acids Research, 2011, v. 39, n. 14, p. 6201, doi. 10.1093/nar/gkr165
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- Publication type:
- Article
Abundance of type I toxin–antitoxin systems in bacteria: searches for new candidates and discovery of novel families.
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- Nucleic Acids Research, 2010, v. 38, n. 11, p. 3743, doi. 10.1093/nar/gkq054
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- Publication type:
- Article
Comparison of approaches for rational siRNA design leading to a new efficient and transparent method.
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- Nucleic Acids Research, 2007, v. 35, n. 8, p. e63, doi. 10.1093/nar/gkm088
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- Publication type:
- Article
Optimization of Duplex Stability and Terminal Asymmetry for shRNA Design
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- PLoS ONE, 2010, v. 5, n. 4, p. 1, doi. 10.1371/journal.pone.0010180
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- Publication type:
- Article
Low Enzymatic Activity Haplotypes of the Human Catechol-O-Methyltransferase Gene: Enrichment for Marker SNPs.
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- PLoS ONE, 2009, v. 4, n. 4, p. 1, doi. 10.1371/journal.pone.0005237
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- Publication type:
- Article
Expression Patterns of Protein Kinases Correlate with Gene Architecture and Evolutionary Rates.
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- PLoS ONE, 2008, v. 3, n. 10, p. 1, doi. 10.1371/journal.pone.0003599
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- Publication type:
- Article
The small protein MgtS and small RNA MgrR modulate the PitA phosphate symporter to boost intracellular magnesium levels.
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- Molecular Microbiology, 2019, v. 111, n. 1, p. 131, doi. 10.1111/mmi.14143
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- Publication type:
- Article
Prospects for Using Expression Patterns of Paramyxovirus Receptors as Biomarkers for Oncolytic Virotherapy.
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- Cancers, 2020, v. 12, n. 12, p. 3659, doi. 10.3390/cancers12123659
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- Publication type:
- Article
Evolution of alternative and constitutive regions of mammalian 5′UTRs.
- Published in:
- BMC Genomics, 2009, v. 10, p. 1, doi. 10.1186/1471-2164-10-162
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- Publication type:
- Article
Identification of regions in multiple sequence alignments thermodynamically suitable for targeting by consensus oligonucleotides: application to HIV genome.
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- BMC Bioinformatics, 2004, v. 5, p. 44, doi. 10.1186/1471-2105-5-44
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- Publication type:
- Article
Comparison of vaccination and booster rates and their impact on excess mortality during the COVID-19 pandemic in European countries.
- Published in:
- Frontiers in Immunology, 2023, p. 1, doi. 10.3389/fimmu.2023.1151311
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- Publication type:
- Article
Growth differentiation factor-15 encodes a novel microRNA 3189 that functions as a potent regulator of cell death.
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- Cell Death & Differentiation, 2015, v. 22, n. 10, p. 1641, doi. 10.1038/cdd.2015.9
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- Publication type:
- Article
A periodic pattern of mRNA secondary structure created by the genetic code.
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- Nucleic Acids Research, 2006, v. 34, n. 8, p. 2428, doi. 10.1093/nar/gkl287
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- Publication type:
- Article
Identification and functional analysis of ‘hypothetical’ genes expressed in Haemophilus influenzae.
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- Nucleic Acids Research, 2004, v. 32, n. 8, p. 2353, doi. 10.1093/nar/gkh555
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- Publication type:
- Article
Comparative analysis of orthologous eukaryotic mRNAs: potential hidden functional signals.
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- Nucleic Acids Research, 2004, v. 32, n. 5, p. 1774, doi. 10.1093/nar/gkh313
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- Publication type:
- Article
Patterns in interspecies similarity correlate with nucleotide composition in mammalian 3′UTRs.
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- Nucleic Acids Research, 2003, v. 31, n. 18, p. 5433, doi. 10.1093/nar/gkg751
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- Publication type:
- Article
Analysis of similarity within 142 pairs of orthologous intergenic regions of Caenorhabditis elegans and Caenorhabditis briggsae.
- Published in:
- Nucleic Acids Research, 2002, v. 30, n. 5, p. 1233, doi. 10.1093/nar/30.5.1233
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- Publication type:
- Article
Actively transcribed rDNA and distal junction (DJ) sequence are involved in association of NORs with nucleoli.
- Published in:
- Cellular & Molecular Life Sciences, 2023, v. 80, n. 5, p. 1, doi. 10.1007/s00018-023-04770-3
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- Publication type:
- Article
The Vast, Conserved Mammalian lincRNome.
- Published in:
- PLoS Computational Biology, 2013, v. 9, n. 2, p. 1, doi. 10.1371/journal.pcbi.1002917
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- Publication type:
- Article
Arginylation regulates purine nucleotide biosynthesis by enhancing the activity of phosphoribosyl pyrophosphate synthase.
- Published in:
- Nature Communications, 2015, v. 6, n. 7, p. 7517, doi. 10.1038/ncomms8517
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- Publication type:
- Article
Gene Family Level Comparative Analysis of Gene Expression in Mammals Validates the Ortholog Conjecture.
- Published in:
- Genome Biology & Evolution, 2014, v. 6, n. 4, p. 754, doi. 10.1093/gbe/evu051
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- Publication type:
- Article
Related Giant Viruses in Distant Locations and Different Habitats: Acanthamoeba polyphaga moumouvirus Represents a Third Lineage of the Mimiviridae That Is Close to the Megavirus Lineage.
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- Genome Biology & Evolution, 2012, v. 4, n. 12, p. 1324, doi. 10.1093/gbe/evs109
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- Publication type:
- Article
Related Giant Viruses in Distant Locations and Different Habitats: Acanthamoeba polyphaga moumouvirus Represents a Third Lineage of the Mimiviridae That Is Close to the Megavirus Lineage.
- Published in:
- Genome Biology & Evolution, 2012, v. 4, n. 9, p. 1324, doi. 10.1093/gbe/evs109
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- Publication type:
- Article
Negative Correlation between Expression Level and Evolutionary Rate of Long Intergenic Noncoding RNAs.
- Published in:
- Genome Biology & Evolution, 2011, v. 3, p. 1390, doi. 10.1093/gbe/evr116
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- Publication type:
- Article
Viruses with More Than 1,000 Genes: Mamavirus, a New Acanthamoeba polyphaga mimivirus Strain, and Reannotation of Mimivirus Genes.
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- Genome Biology & Evolution, 2011, v. 3, p. 737, doi. 10.1093/gbe/evr048
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- Publication type:
- Article
Distinct Patterns of Expression and Evolution of Intronless and Intron-Containing Mammalian Genes.
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- Molecular Biology & Evolution, 2010, v. 27, n. 8, p. 1745, doi. 10.1093/molbev/msq086
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- Publication type:
- Article
Widespread Positive Selection in Synonymous Sites of Mammalian Genes.
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- Molecular Biology & Evolution, 2007, v. 24, n. 8, p. 1821, doi. 10.1093/molbev/msm100
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- Publication type:
- Article
Understanding off-target effects through hybridization kinetics and thermodynamics.
- Published in:
- 2020
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- Publication type:
- Editorial
The genomic structure of a human chromosome 22 nucleolar organizer region determined by TAR cloning.
- Published in:
- Scientific Reports, 2021, v. 11, n. 1, p. 1, doi. 10.1038/s41598-021-82565-x
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- Publication type:
- Article
Correction to: Alternative Splicing of Opioid Receptor Genes Shows a Conserved Pattern for 6TM Receptor Variants.
- Published in:
- 2021
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- Publication type:
- Correction Notice
Alternative Splicing of Opioid Receptor Genes Shows a Conserved Pattern for 6TM Receptor Variants.
- Published in:
- Cellular & Molecular Neurobiology, 2021, v. 41, n. 5, p. 1039, doi. 10.1007/s10571-020-00971-7
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- Publication type:
- Article
Analysis of internal loops within the RNA secondary structure in almost quadratic time.
- Published in:
- Bioinformatics, 2006, v. 22, n. 11, p. 1317, doi. 10.1093/bioinformatics/btl083
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- Publication type:
- Article
OWEN: aligning long collinear regions of genomes.
- Published in:
- Bioinformatics, 2002, v. 18, n. 12, p. 1703, doi. 10.1093/bioinformatics/18.12.1703
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- Publication type:
- Article
A hierarchical approach to aligning collinear regions of genomes.
- Published in:
- Bioinformatics, 2002, v. 18, n. 12, p. 1673, doi. 10.1093/bioinformatics/18.12.1673
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- Publication type:
- Article
3′ UTR-derived small RNA connecting nitrogen and carbon metabolism in enteric bacteria.
- Published in:
- Nucleic Acids Research, 2022, v. 50, n. 17, p. 10093, doi. 10.1093/nar/gkac748
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- Publication type:
- Article
Uncertainty-aware and interpretable evaluation of Cas9–gRNA and Cas12a–gRNA specificity for fully matched and partially mismatched targets with Deep Kernel Learning.
- Published in:
- Nucleic Acids Research, 2022, v. 50, n. 2, p. e11, doi. 10.1093/nar/gkab1065
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- Publication type:
- Article
vast pool of lineage-specific microproteins encoded by long non-coding RNAs in plants.
- Published in:
- Nucleic Acids Research, 2021, v. 49, n. 18, p. 10328, doi. 10.1093/nar/gkab816
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- Publication type:
- Article
Expansion of the human μ-opioid receptor gene architecture: novel functional variants.
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- Human Molecular Genetics, 2009, v. 18, n. 6, p. 1037, doi. 10.1093/hmg/ddn439
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- Publication type:
- Article
Genetic basis for individual variations in pain perception and the development of a chronic pain condition.
- Published in:
- Human Molecular Genetics, 2005, v. 14, n. 1, p. 135, doi. 10.1093/hmg/ddi013
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- Publication type:
- Article
Classification of common conserved sequences in mammalian intergenic regions.
- Published in:
- Human Molecular Genetics, 2002, v. 11, n. 6, p. 669, doi. 10.1093/hmg/11.6.669
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- Publication type:
- Article
Sequence characteristics define trade-offs between on-target and genome-wide off-target hybridization of oligoprobes.
- Published in:
- PLoS ONE, 2018, v. 13, n. 6, p. 1, doi. 10.1371/journal.pone.0199162
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- Publication type:
- Article
Alternative Splicing of the Delta-Opioid Receptor Gene Suggests Existence of New Functional Isoforms.
- Published in:
- Molecular Neurobiology, 2019, v. 56, n. 4, p. 2855, doi. 10.1007/s12035-018-1253-z
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- Publication type:
- Article
Optimization of signal-to-noise ratio for efficient microarray probe design.
- Published in:
- Bioinformatics, 2016, v. 32, n. 17, p. i552, doi. 10.1093/bioinformatics/btw451
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- Publication type:
- Article