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Conserved brain myelination networks are altered in Alzheimer's and other neurodegenerative diseases.
Published in:
Alzheimer's & Dementia: The Journal of the Alzheimer's Association, 2018, v. 14, n. 3, p. 352, doi. 10.1016/j.jalz.2017.09.012
By:
- Allen, Mariet;
- Wang, Xue;
- Burgess, Jeremy D.;
- Watzlawik, Jens;
- Serie, Daniel J.;
- Younkin, Curtis S.;
- Nguyen, Thuy;
- Malphrus, Kimberly G.;
- Lincoln, Sarah;
- Carrasquillo, Minerva M.;
- Ho, Charlotte;
- Chakrabarty, Paramita;
- Strickland, Samantha;
- Murray, Melissa E.;
- Swarup, Vivek;
- Geschwind, Daniel H.;
- Seyfried, Nicholas T.;
- Dammer, Eric B.;
- Lah, James J.;
- Levey, Allan I.
Publication type:
Article
Systems biology approach to late-onset Alzheimer's disease genome-wide association study identifies novel candidate genes validated using brain expression data and Caenorhabditis elegans experiments.
Published in:
Alzheimer's & Dementia: The Journal of the Alzheimer's Association, 2017, v. 13, n. 10, p. 1133, doi. 10.1016/j.jalz.2017.01.016
By:
- Mukherjee, Shubhabrata;
- Russell, Joshua C.;
- Carr, Daniel T.;
- Burgess, Jeremy D.;
- Allen, Mariet;
- Serie, Daniel J.;
- Boehme, Kevin L.;
- Kauwe, John S.K.;
- Naj, Adam C.;
- Fardo, David W.;
- Dickson, Dennis W.;
- Montine, Thomas J.;
- Ertekin-Taner, Nilufer;
- Kaeberlein, Matt R.;
- Crane, Paul K.
Publication type:
Article
Chromoanasynthesis is a common mechanism that leads to ERBB2 amplifications in a cohort of early stage HER2<sup>+</sup> breast cancer samples.
Published in:
2018
By:
- Vasmatzis, George;
- Wang, Xue;
- Smadbeck, James B;
- Murphy, Stephen J;
- Geiersbach, Katherine B;
- Johnson, Sarah H;
- Gaitatzes, Athanasios G;
- Asmann, Yan W;
- Kosari, Farhad;
- Borad, Mitesh J;
- Serie, Daniel J;
- McLaughlin, Sarah A;
- Kachergus, Jennifer M;
- Necela, Brian M;
- Aubrey Thompson, E;
- Thompson, E Aubrey
Publication type:
journal article
The antineoplastic drug, trastuzumab, dysregulates metabolism in iPSC‐derived cardiomyocytes.
Published in:
Clinical & Translational Medicine, 2017, v. 6, n. 1, p. 1, doi. 10.1186/s40169-016-0133-2
By:
- Necela, Brian M.;
- Axenfeld, Bianca C.;
- Serie, Daniel J.;
- Kachergus, Jennifer M.;
- Perez, Edith A.;
- Thompson, E. Aubrey;
- Norton, Nadine
Publication type:
Article
Transcriptomic analysis to identify genes associated with selective hippocampal vulnerability in Alzheimer's disease.
Published in:
Nature Communications, 2021, v. 12, n. 1, p. 1, doi. 10.1038/s41467-021-22399-3
By:
- Crist, Angela M.;
- Hinkle, Kelly M.;
- Wang, Xue;
- Moloney, Christina M.;
- Matchett, Billie J.;
- Labuzan, Sydney A.;
- Frankenhauser, Isabelle;
- Azu, Nkem O.;
- Liesinger, Amanda M.;
- Lesser, Elizabeth R.;
- Serie, Daniel J.;
- Quicksall, Zachary S.;
- Patel, Tulsi A.;
- Carnwath, Troy P.;
- DeTure, Michael;
- Tang, Xiaojia;
- Petersen, Ronald C.;
- Duara, Ranjan;
- Graff-Radford, Neill R.;
- Allen, Mariet
Publication type:
Article
RNA sequencing identifies multiple fusion transcripts, differentially expressed genes, and reduced expression of immune function genes in BRAF (V600E) mutant vs BRAF wild-type papillary thyroid carcinoma.
Published in:
2014
By:
- Smallridge, Robert C;
- Chindris, Ana-Maria;
- Asmann, Yan W;
- Casler, John D;
- Serie, Daniel J;
- Reddi, Honey V;
- Cradic, Kendall W;
- Rivera, Michael;
- Grebe, Stefan K;
- Necela, Brian M;
- Eberhardt, Norman L;
- Carr, Jennifer M;
- McIver, Bryan;
- Copland, John A;
- Aubrey Thompson, E;
- Thompson, E Aubrey
Publication type:
journal article
Correction: Folate Receptor-α (FOLR1) Expression and Function in Triple Negative Tumors.
Published in:
PLoS ONE, 2015, v. 10, n. 4, p. 1, doi. 10.1371/journal.pone.0127133
By:
- Necela, Brian M.;
- Crozier, Jennifer A.;
- Andorfer, Cathy A.;
- Lewis-Tuffin, Laura;
- Kachergus, Jennifer M.;
- Geiger, Xochiquetzal J.;
- Kalari, Krishna R.;
- Serie, Daniel J.;
- Sun, Zhifu;
- Moreno-Aspitia, Alvaro;
- O’Shannessy, Daniel J.;
- Maltzman, Julia D.;
- McCullough, Ann E.;
- Pockaj, Barbara A.;
- Cunliffe, Heather E.;
- Ballman, Karla V.;
- Thompson, E. Aubrey;
- Perez, Edith A.
Publication type:
Article
Folate Receptor-α (FOLR1) Expression and Function in Triple Negative Tumors.
Published in:
PLoS ONE, 2015, v. 10, n. 3, p. 1, doi. 10.1371/journal.pone.0122209
By:
- Necela, Brian M.;
- Crozier, Jennifer A.;
- Andorfer, Cathy A.;
- Lewis-Tuffin, Laura;
- Kachergus, Jennifer M.;
- Geiger, Xochiquetzal J.;
- Kalari, Krishna R.;
- Serie, Daniel J.;
- Sun, Zhifu;
- Aspita, Alvaro Moreno;
- O’Shannessy, Daniel J.;
- Maltzman, Julia D.;
- McCullough, Ann E.;
- Pockaj, Barbara A.;
- Cunliffe, Heather E.;
- Ballman, Karla V.;
- Thompson, E. Aubrey;
- Perez, Edith A.
Publication type:
Article
Gene Expression, Single Nucleotide Variant and Fusion Transcript Discovery in Archival Material from Breast Tumors.
Published in:
PLoS ONE, 2013, v. 8, n. 11, p. 1, doi. 10.1371/journal.pone.0081925
By:
- Norton, Nadine;
- Sun, Zhifu;
- Asmann, Yan W.;
- Serie, Daniel J.;
- Necela, Brian M.;
- Bhagwate, Aditya;
- Jen, Jin;
- Eckloff, Bruce W.;
- Kalari, Krishna R.;
- Thompson, Kevin J.;
- Carr, Jennifer M.;
- Kachergus, Jennifer M.;
- Geiger, Xochiquetzal J.;
- Perez, Edith A.;
- Thompson, E. Aubrey
Publication type:
Article
<i>NOTCH3</i> Variants and Risk of Ischemic Stroke.
Published in:
PLoS ONE, 2013, v. 8, n. 9, p. 1, doi. 10.1371/journal.pone.0075035
By:
- Ross, Owen A.;
- Soto-Ortolaza, Alexandra I.;
- Heckman, Michael G.;
- Verbeeck, Christophe;
- Serie, Daniel J.;
- Rayaprolu, Sruti;
- Rich, Stephen S.;
- Nalls, Michael A.;
- Singleton, Andrew;
- Guerreiro, Rita;
- Kinsella, Emma;
- Wszolek, Zbigniew K.;
- Brott, Thomas G.;
- Brown Jr., Robert D.;
- Worrall, Bradford B.;
- Meschia, James F.
Publication type:
Article
Inherited Variants in Regulatory T Cell Genes and Outcome of Ovarian Cancer.
Published in:
PLoS ONE, 2013, v. 8, n. 1, p. 1, doi. 10.1371/journal.pone.0053903
By:
- Goode, Ellen L.;
- DeRycke, Melissa;
- Kalli, Kimberly R.;
- Oberg, Ann L.;
- Cunningham, Julie M.;
- Maurer, Matthew J.;
- Fridley, Brooke L.;
- Armasu, Sebastian M.;
- Serie, Daniel J.;
- Ramar, Priya;
- Goergen, Krista;
- Vierkant, Robert A.;
- Rider, David N.;
- Sicotte, Hugues;
- Chen Wang;
- Winterhoff, Boris;
- Phelan, Catherine M.;
- Schildkraut, Joellen M.;
- Weber, Rachel P.;
- Iversen, Ed
Publication type:
Article
Colorectal Cancer Linkage on Chromosomes 4q21, 8q13, 12q24, and 15q22.
Published in:
PLoS ONE, 2012, v. 7, n. 5, p. 1, doi. 10.1371/journal.pone.0038175
By:
- Cicek, Mine S.;
- Cunningham, Julie M.;
- Fridley, Brooke L.;
- Serie, Daniel J.;
- Bamlet, William R.;
- Diergaarde, Brenda;
- Haile, Robert W.;
- Marchand, Loic Le;
- Krontiris, Theodore G.;
- Banfield Younghusband, H.;
- Gallinger, Steven;
- Newcomb, Polly A.;
- Hopper, John L.;
- Jenkins, Mark A.;
- Casey, Graham;
- Schumacher, Fredrick;
- Zhu Chen;
- DeRycke, Melissa S.;
- Templeton, Allyson S.;
- Winship, Ingrid
Publication type:
Article
BAP1 and PBRM1 in metastatic clear cell renal cell carcinoma: tumor heterogeneity and concordance with paired primary tumor.
Published in:
2017
By:
- Eckel-Passow, Jeanette E.;
- Serie, Daniel J.;
- Cheville, John C.;
- Ho, Thai H.;
- Kapur, Payal;
- Brugarolas, James;
- Houston Thompson, R.;
- Leibovich, Bradley C.;
- Kwon, Eugene D.;
- Joseph, Richard W.;
- Parker, Alexander S.;
- Thompson, R Houston
Publication type:
journal article
ANKS1B is a smoking-related molecular alteration in clear cell renal cell carcinoma.
Published in:
BMC Urology, 2014, v. 14, n. 1, p. 1, doi. 10.1186/1471-2490-14-14
By:
- Eckel-Passow, Jeanette E.;
- Serie, Daniel J.;
- Bot, Brian M.;
- Joseph, Richard W.;
- Cheville, John C.;
- Parker, Alexander S.
Publication type:
Article
ANKS1B is a smoking-related molecular alteration in clear cell renal cell carcinoma.
Published in:
2014
By:
- Eckel-Passow, Jeanette E;
- Serie, Daniel J;
- Bot, Brian M;
- Joseph, Richard W;
- Cheville, John C;
- Parker, Alexander S
Publication type:
journal article
Coffee consumption and risk of renal cell carcinoma.
Published in:
2017
By:
- Antwi, Samuel;
- Eckel-Passow, Jeanette;
- Diehl, Nancy;
- Serie, Daniel;
- Custer, Kaitlynn;
- Arnold, Michelle;
- Wu, Kevin;
- Cheville, John;
- Thiel, David;
- Leibovich, Bradley;
- Parker, Alexander;
- Antwi, Samuel O;
- Eckel-Passow, Jeanette E;
- Diehl, Nancy D;
- Serie, Daniel J;
- Custer, Kaitlynn M;
- Arnold, Michelle L;
- Wu, Kevin J;
- Cheville, John C;
- Thiel, David D
Publication type:
journal article
Validation of the NSABP/NRG Oncology 8-Gene Trastuzumab-benefit Signature in Alliance/NCCTG N9831.
Published in:
JNCI Cancer Spectrum, 2020, v. 4, n. 5, p. 1, doi. 10.1093/jncics/pkaa058
By:
- Pogue-Geile, Katherine L;
- Song, Nan;
- Serie, Daniel J;
- Wang, Ying;
- Gavin, Patrick G;
- Kim, Rim S;
- Tanaka, Noriko;
- Fumagalli, Debora;
- Taniyama, Yusuke;
- Li, Zhuo;
- Rastogi, Priya;
- Swain, Sandra M;
- Mamounas, Eleftherios P;
- Geyer, Charles E;
- Wolmark, Norman;
- Lucas, Peter C;
- Paik, Soonmyung;
- Thompson, E Aubrey
Publication type:
Article
Adaptive immune signature in HER2-positive breast cancer in NCCTG (Alliance) N9831 and NeoALTTO trials.
Published in:
NPJ Breast Cancer, 2022, v. 8, n. 1, p. 1, doi. 10.1038/s41523-022-00430-0
By:
- Chumsri, Saranya;
- Li, Zhuo;
- Serie, Daniel J.;
- Norton, Nadine;
- Mashadi-Hossein, Afshin;
- Tenner, Kathleen;
- Brauer, Heather Ann;
- Warren, Sarah;
- Danaher, Patrick;
- Colon-Otero, Gerardo;
- Partridge, Ann H.;
- Carey, Lisa A.;
- Hilbers, Florentine;
- Van Dooren, Veerle;
- Holmes, Eileen;
- Di Cosimo, Serena;
- Werner, Olena;
- Huober, Jens Bodo;
- Dueck, Amylou C.;
- Sotiriou, Christos
Publication type:
Article
Concordance of PD‐1 and PD‐L1 (B7‐H1) in paired primary and metastatic clear cell renal cell carcinoma.
Published in:
Cancer Medicine, 2020, v. 9, n. 3, p. 1152, doi. 10.1002/cam4.2769
By:
- Eckel‐Passow, Jeanette E.;
- Ho, Thai H.;
- Serie, Daniel J.;
- Cheville, John C.;
- Houston Thompson, R.;
- Costello, Brian A.;
- Dong, Haidong;
- Kwon, Eugene D.;
- Leibovich, Bradley C.;
- Parker, Alexander S.
Publication type:
Article
The influence of mammogram acquisition on the mammographic density and breast cancer association in the mayo mammography health study cohort.
Published in:
Breast Cancer Research, 2012, v. 14, n. 6, p. R147, doi. 10.1186/bcr3357
By:
- Olson, Janet E.;
- Sellers, Thomas A.;
- Scott, Christopher G.;
- Schueler, Beth A.;
- Brandt, Kathleen R.;
- Serie, Daniel J.;
- Jensen, Matthew R.;
- Fang-Fang Wu;
- Morton, Marilyn J.;
- Heine, John J.;
- Couch, Fergus J.;
- Pankratz, V. Shane;
- Vachon, Celine M.
Publication type:
Article
Somatic expression of ENRAGE is associated with obesity status among patients with clear cell renal cell carcinoma.
Published in:
Carcinogenesis, 2014, v. 35, n. 4, p. 822, doi. 10.1093/carcin/bgt485
By:
- Eckel-Passow, Jeanette E.;
- Serie, Daniel J.;
- Bot, Brian M.;
- Joseph, Richard W.;
- Hart, Steven N.;
- Cheville, John C.;
- Parker, Alexander S.
Publication type:
Article
Genome-wide association study of corticobasal degeneration identifies risk variants shared with progressive supranuclear palsy.
Published in:
Nature Communications, 2015, v. 6, n. 6, p. 7247, doi. 10.1038/ncomms8247
By:
- Kouri, Naomi;
- Ross, Owen A.;
- Dombroski, Beth;
- Younkin, Curtis S.;
- Serie, Daniel J.;
- Soto-Ortolaza, Alexandra;
- Baker, Matthew;
- Finch, Ni Cole A.;
- Yoon, Hyejin;
- Kim, Jungsu;
- Fujioka, Shinsuke;
- McLean, Catriona A.;
- Ghetti, Bernardino;
- Spina, Salvatore;
- Cantwell, Laura B.;
- Farlow, Martin R.;
- Grafman, Jordan;
- Huey, Edward D.;
- Ryung Han, Mi;
- Beecher, Sherry
Publication type:
Article
Alcohol consumption, variability in alcohol dehydrogenase genes and risk of renal cell carcinoma.
Published in:
International Journal of Cancer, 2018, v. 142, n. 4, p. 747, doi. 10.1002/ijc.31103
By:
- Antwi, Samuel O.;
- Eckel-Passow, Jeanette E.;
- Diehl, Nancy D.;
- Serie, Daniel J.;
- Custer, Kaitlynn M.;
- Wu, Kevin J.;
- Cheville, John C.;
- Thiel, David D.;
- Leibovich, Bradley C.;
- Parker, Alexander S.
Publication type:
Article
Assessment of Tumor Heterogeneity, as Evidenced by Gene Expression Profiles, Pathway Activation, and Gene Copy Number, in Patients with Multifocal Invasive Lobular Breast Tumors.
Published in:
PLoS ONE, 2016, v. 11, n. 4, p. 1, doi. 10.1371/journal.pone.0153411
By:
- Norton, Nadine;
- Advani, Pooja P.;
- Serie, Daniel J.;
- Geiger, Xochiquetzal J.;
- Necela, Brian M.;
- Axenfeld, Bianca C.;
- Kachergus, Jennifer M.;
- Feathers, Ryan W.;
- Carr, Jennifer M.;
- Crook, Julia E.;
- Moreno-Aspitia, Alvaro;
- Anastasiadis, Panos Z.;
- Perez, Edith A.;
- Thompson, E. Aubrey
Publication type:
Article
Latent trait modeling of tau neuropathology in progressive supranuclear palsy.
Published in:
Acta Neuropathologica, 2021, v. 141, n. 5, p. 667, doi. 10.1007/s00401-021-02289-0
By:
- Kouri, Naomi;
- Murray, Melissa E.;
- Reddy, Joseph S.;
- Serie, Daniel J.;
- Soto-Beasley, Alexandra;
- Allen, Mariet;
- Carrasquillo, Minerva M.;
- Wang, Xue;
- Castanedes, Monica Casey;
- Baker, Matthew C.;
- Rademakers, Rosa;
- Uitti, Ryan J.;
- Graff-Radford, Neill R.;
- Wszolek, Zbigniew K.;
- Schellenberg, Gerard D.;
- Crook, Julia E.;
- Ertekin-Taner, Nilüfer;
- Ross, Owen A.;
- Dickson, Dennis W.
Publication type:
Article
Divergent brain gene expression patterns associate with distinct cell-specific tau neuropathology traits in progressive supranuclear palsy.
Published in:
Acta Neuropathologica, 2018, v. 136, n. 5, p. 709, doi. 10.1007/s00401-018-1900-5
By:
- Allen, Mariet;
- Wang, Xue;
- Serie, Daniel J.;
- Strickland, Samantha L.;
- Burgess, Jeremy D.;
- Koga, Shunsuke;
- Younkin, Curtis S.;
- Nguyen, Thuy T.;
- Malphrus, Kimberly G.;
- Lincoln, Sarah J.;
- Alamprese, Melissa;
- Zhu, Kuixi;
- Chang, Rui;
- Carrasquillo, Minerva M.;
- Kouri, Naomi;
- Murray, Melissa E.;
- Reddy, Joseph S.;
- Funk, Cory;
- Price, Nathan D.;
- Golde, Todd E.
Publication type:
Article
Loss of BAP1 protein expression is an independent marker of poor prognosis in patients with low-risk clear cell renal cell carcinoma.
Published in:
Cancer (0008543X), 2014, v. 120, n. 7, p. 1059, doi. 10.1002/cncr.28521
By:
- Joseph, Richard W.;
- Kapur, Payal;
- Serie, Daniel J.;
- Eckel‐Passow, Jeanette E.;
- Parasramka, Mansi;
- Ho, Thai;
- Cheville, John C.;
- Frenkel, Eugene;
- Rakheja, Dinesh;
- Brugarolas, James;
- Parker, Alexander
Publication type:
Article
Common variants within 6p21.31 locus are associated with chronic lymphocytic leukaemia and, potentially, other non- Hodgkin lymphoma subtypes.
Published in:
British Journal of Haematology, 2012, v. 159, n. 5, p. 572, doi. 10.1111/bjh.12070
By:
- Slager, Susan L.;
- Camp, Nicola J.;
- Conde, Lucia;
- Shanafelt, Tait D.;
- Achenbach, Sara J.;
- Rabe, Kari G.;
- Kay, Neil E.;
- Novak, Anne J.;
- Call, Timothy G.;
- Bracci, Paige M.;
- Sille, Fenna M. C.;
- Sanchez, Sylvia;
- Akers, Nicholas K.;
- Cunningham, Julie M.;
- Serie, Daniel J.;
- McDonnell, Shannon K.;
- Leis, Jose F.;
- Wang, Alice H.;
- Weinberg, J. Brice;
- Glenn, Martha
Publication type:
Article
A novel automated mammographic density measure and breast cancer risk.
Published in:
2012
By:
- Heine JJ;
- Scott CG;
- Sellers TA;
- Brandt KR;
- Serie DJ;
- Wu FF;
- Morton MJ;
- Schueler BA;
- Couch FJ;
- Olson JE;
- Pankratz VS;
- Vachon CM;
- Heine, John J;
- Scott, Christopher G;
- Sellers, Thomas A;
- Brandt, Kathleen R;
- Serie, Daniel J;
- Wu, Fang-Fang;
- Morton, Marilyn J;
- Schueler, Beth A
Publication type:
journal article
A Novel Automated Mammographic Density Measure and Breast Cancer Risk.
Published in:
JNCI: Journal of the National Cancer Institute, 2012, v. 104, n. 13, p. 1028, doi. 10.1093/jnci/djs254
By:
- Heine, John J.;
- Scott, Christopher G.;
- Sellers, Thomas A.;
- Brandt, Kathleen R.;
- Serie, Daniel J.;
- Wu, Fang-Fang;
- Morton, Marilyn J.;
- Schueler, Beth A.;
- Couch, Fergus J.;
- Olson, Janet E.;
- Pankratz, V. Shane;
- Vachon, Celine M.
Publication type:
Article
Replication of progressive supranuclear palsy genome-wide association study identifies <italic>SLCO1A2</italic> and <italic>DUSP10</italic> as new susceptibility loci.
Published in:
Molecular Neurodegeneration, 2018, v. 13, n. 1, p. N.PAG, doi. 10.1186/s13024-018-0267-3
By:
- Sanchez-Contreras, Monica Y.;
- Kouri, Naomi;
- Cook, Casey N.;
- Serie, Daniel J.;
- Heckman, Michael G.;
- Finch, NiCole A.;
- Caselli, Richard J.;
- Uitti, Ryan J.;
- Wszolek, Zbigniew K.;
- Graff-Radford, Neill;
- Petrucelli, Leonard;
- Wang, Li-San;
- Schellenberg, Gerard D.;
- Dickson, Dennis W.;
- Rademakers, Rosa;
- Ross, Owen A.
Publication type:
Article

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