Works by Seo, Ji-Heui

Results: 17

Epigenomic profiling nominates master transcription factors (TFs) driving sarcomatoid differentiation (SD) of renal cell carcinoma (RCC).

Published in:

Oncologist, 2023, v. 28, p. S8, doi. 10.1093/oncolo/oyad216.012

By:

Zarif, Talal El;
Semaan, Karl;
Eid, Marc;
Fortunato, Brad;
Nassar, Amin H;
Alaiwi, Sarah Abou;
Bakouny, Ziad;
Shah, Valisha;
Saliby, Renee Maria;
Seo, Ji-Heui;
Labaki, Chris;
Saad, Eddy;
Garinet, Simon;
Matar, Sayed;
Ahmar, Nourhan;
Laimon, Yasmin Nabil;
Lee, Gwo-Shu Mary;
Pomerantz, Mark;
Berchuck, Jacob E;
Viswanathan, Srinivas R

Publication type:

Article

A compendium of Amplification-Related Gain Of Sensitivity genes in human cancer.

Published in:

Nature Communications, 2025, v. 16, n. 1, p. 1, doi. 10.1038/s41467-025-56301-2

By:

Rendo, Veronica;
Schubert, Michael;
Khuu, Nicholas;
Suarez Peredo Rodriguez, Maria F.;
Whyte, Declan;
Ling, Xiao;
van den Brink, Anouk;
Huang, Kaimeng;
Swift, Michelle;
He, Yizhou;
Zerbib, Johanna;
Smith, Ross;
Raaijmakers, Jonne;
Bandopadhayay, Pratiti;
Guenther, Lillian M.;
Hwang, Justin H.;
Iniguez, Amanda;
Moody, Susan;
Seo, Ji-Heui;
Stover, Elizabeth H.

Publication type:

Article

Decoding the epigenetics and chromatin loop dynamics of androgen receptor-mediated transcription.

Published in:

Nature Communications, 2024, v. 15, n. 1, p. 1, doi. 10.1038/s41467-024-53758-5

By:

Altıntaş, Umut Berkay;
Seo, Ji-Heui;
Giambartolomei, Claudia;
Ozturan, Dogancan;
Fortunato, Brad J.;
Nelson, Geoffrey M.;
Goldman, Seth R.;
Adelman, Karen;
Hach, Faraz;
Freedman, Matthew L.;
Lack, Nathan A.

Publication type:

Article

MYC drives aggressive prostate cancer by disrupting transcriptional pause release at androgen receptor targets.

Published in:

Nature Communications, 2022, v. 13, n. 1, p. 1, doi. 10.1038/s41467-022-30257-z

By:

Qiu, Xintao;
Boufaied, Nadia;
Hallal, Tarek;
Feit, Avery;
de Polo, Anna;
Luoma, Adrienne M.;
Alahmadi, Walaa;
Larocque, Janie;
Zadra, Giorgia;
Xie, Yingtian;
Gu, Shengqing;
Tang, Qin;
Zhang, Yi;
Syamala, Sudeepa;
Seo, Ji-Heui;
Bell, Connor;
O'Connor, Edward;
Liu, Yang;
Schaeffer, Edward M.;
Jeffrey Karnes, R.

Publication type:

Article

Androgen receptor and MYC equilibration centralizes on developmental super-enhancer.

Published in:

Nature Communications, 2021, v. 12, n. 1, p. 1, doi. 10.1038/s41467-021-27077-y

By:

Guo, Haiyang;
Wu, Yiming;
Nouri, Mannan;
Spisak, Sandor;
Russo, Joshua W.;
Sowalsky, Adam G.;
Pomerantz, Mark M.;
Wei, Zhao;
Korthauer, Keegan;
Seo, Ji-Heui;
Wang, Liyang;
Arai, Seiji;
Freedman, Matthew L.;
He, Housheng Hansen;
Chen, Shaoyong;
Balk, Steven P.

Publication type:

Article

Subtype heterogeneity and epigenetic convergence in neuroendocrine prostate cancer.

Published in:

Nature Communications, 2021, v. 12, n. 1, p. 1, doi. 10.1038/s41467-021-26042-z

By:

Cejas, Paloma;
Xie, Yingtian;
Font-Tello, Alba;
Lim, Klothilda;
Syamala, Sudeepa;
Qiu, Xintao;
Tewari, Alok K.;
Shah, Neel;
Nguyen, Holly M.;
Patel, Radhika A.;
Brown, Lisha;
Coleman, Ilsa;
Hackeng, Wenzel M.;
Brosens, Lodewijk;
Dreijerink, Koen M. A.;
Ellis, Leigh;
Alaiwi, Sarah Abou;
Seo, Ji-Heui;
Baca, Sylvan;
Beltran, Himisha

Publication type:

Article

Correction: Evaluation of significant genome-wide association studies risk—SNPs in young breast cancer patients.

Published in:

2020

By:

Rath, Michelle;
Li, Qiyuan;
Li, Huili;
Lindström, Sara;
Miron, Alexander;
Miron, Penelope;
Dowton, Anne A.;
Meyer, Meghan E.;
Larson, Bryce G.;
Pomerantz, Mark;
Seo, Ji-Heui;
Collins, Laura C.;
Vardeh, Hilde;
Brachtel, Elena;
Come, Steven E.;
Borges, Virginia;
Schapira, Lidia;
Tamimi, Rulla M.;
Partridge, Ann H.;
Freedman, Matthew

Publication type:

Correction Notice

Epigenomic charting and functional annotation of risk loci in renal cell carcinoma.

Published in:

Nature Communications, 2023, v. 14, n. 1, p. 1, doi. 10.1038/s41467-023-35833-5

By:

Nassar, Amin H.;
Abou Alaiwi, Sarah;
Baca, Sylvan C.;
Adib, Elio;
Corona, Rosario I.;
Seo, Ji-Heui;
Fonseca, Marcos A. S.;
Spisak, Sandor;
El Zarif, Talal;
Tisza, Viktoria;
Braun, David A.;
Du, Heng;
He, Monica;
Flaifel, Abdallah;
Alchoueiry, Michel;
Denize, Thomas;
Matar, Sayed G.;
Acosta, Andres;
Shukla, Sachet;
Hou, Yue

Publication type:

Article

Extensive androgen receptor enhancer heterogeneity in primary prostate cancers underlies transcriptional diversity and metastatic potential.

Published in:

Nature Communications, 2022, v. 13, n. 1, p. 1, doi. 10.1038/s41467-022-35135-2

By:

Kneppers, Jeroen;
Severson, Tesa M.;
Siefert, Joseph C.;
Schol, Pieter;
Joosten, Stacey E. P.;
Yu, Ivan Pak Lok;
Huang, Chia-Chi Flora;
Morova, Tunç;
Altıntaş, Umut Berkay;
Giambartolomei, Claudia;
Seo, Ji-Heui;
Baca, Sylvan C.;
Carneiro, Isa;
Emberly, Eldon;
Pasaniuc, Bogdan;
Jerónimo, Carmen;
Henrique, Rui;
Freedman, Matthew L.;
Wessels, Lodewyk F. A.;
Lack, Nathan A.

Publication type:

Article

A biallelic multiple nucleotide length polymorphism explains functional causality at 5p15.33 prostate cancer risk locus.

Published in:

Nature Communications, 2023, v. 14, n. 1, p. 1, doi. 10.1038/s41467-023-40616-z

By:

Spisak, Sandor;
Tisza, Viktoria;
Nuzzo, Pier Vitale;
Seo, Ji-Heui;
Pataki, Balint;
Ribli, Dezso;
Sztupinszki, Zsofia;
Bell, Connor;
Rohanizadegan, Mersedeh;
Stillman, David R.;
Alaiwi, Sarah Abou;
Bartels, Alan B.;
Papp, Marton;
Shetty, Anamay;
Abbasi, Forough;
Lin, Xianzhi;
Lawrenson, Kate;
Gayther, Simon A.;
Pomerantz, Mark;
Baca, Sylvan

Publication type:

Article

Cis-eQTL analysis and functional validation of candidate susceptibility genes for high-grade serous ovarian cancer.

Published in:

Nature Communications, 2015, v. 6, n. 9, p. 8234, doi. 10.1038/ncomms9234

By:

Lawrenson, Kate;
Li, Qiyuan;
Kar, Siddhartha;
Seo, Ji-Heui;
Tyrer, Jonathan;
Spindler, Tassja J.;
Lee, Janet;
Chen, Yibu;
Karst, Alison;
Drapkin, Ronny;
Aben, Katja K. H.;
Anton-Culver, Hoda;
Antonenkova, Natalia;
Baker, Helen;
Bandera, Elisa V.;
Bean, Yukie;
Beckmann, Matthias W.;
Berchuck, Andrew;
Bisogna, Maria;
Bjorge, Line

Publication type:

Article

Evaluation of significant genome-wide association studies risk — SNPs in young breast cancer patients.

Published in:

PLoS ONE, 2019, v. 14, n. 5, p. 1, doi. 10.1371/journal.pone.0216997

By:

Rath, Michelle;
Li, Qiyuan;
Li, Huili;
Lindström, Sara;
Miron, Alexander;
Miron, Penelope;
Dowton, Anne E.;
Meyer, Meghan E.;
Larson, Bryce G.;
Pomerantz, Mark;
Seo, Ji-Heui;
Collins, Laura C.;
Vardeh, Hilde;
Brachtel, Elena;
Come, Steven E.;
Borges, Virginia;
Schapira, Lidia;
Tamimi, Rulla M.;
Partridge, Ann H.;
Freedman, Matthew

Publication type:

Article

Antioxidative and Proapoptotic Effects of Riluzole on Cultured Cortical Neurons.

Published in:

Journal of Neurochemistry, 1999, v. 72, n. 2, p. 716, doi. 10.1046/j.1471-4159.1999.0720716.x

By:

Koh, Jae-Young;
Kim, Dae-Kyong;
Hwang, Jee Yeon;
Kim, Yang Hee;
Seo, Ji Heui

Publication type:

Article

CAUSEL: an epigenome- and genome-editing pipeline for establishing function of noncoding GWAS variants.

Published in:

Nature Medicine, 2015, v. 21, n. 11, p. 1357, doi. 10.1038/nm.3975

By:

Spisák, Sándor;
Lawrenson, Kate;
Fu, Yanfang;
Csabai, István;
Cottman, Rebecca T;
Seo, Ji-Heui;
Haiman, Christopher;
Han, Ying;
Lenci, Romina;
Li, Qiyuan;
Tisza, Viktória;
Szállási, Zoltán;
Herbert, Zachery T;
Chabot, Matthew;
Pomerantz, Mark;
Solymosi, Norbert;
Gayther, Simon A;
Joung, J Keith;
Freedman, Matthew L

Publication type:

Article

α‐Synuclein regulates neuronal survival via Bcl‐2 family expression and PI3/Akt kinase pathway.

Published in:

FASEB Journal, 2002, v. 16, n. 13, p. 1, doi. 10.1096/fj.02-0041fje

By:

Seo, Ji‐Heui;
Rah, Jong‐Cheol;
Choi, Se Hoon;
Shin, Jae Kyung;
Min, Kyeoungsik;
Kim, Hye‐Sun;
Park, Cheol Hyoung;
Kim, Seonghan;
Kim, Eun‐Mee;
Lee, Sang‐Hyoung;
Lee, Sangho;
Won Suh, Se;
Suh, Yoo‐Hun

Publication type:

Article

Reprogramming of the FOXA1 cistrome in treatment-emergent neuroendocrine prostate cancer.

Published in:

Nature Communications, 2021, v. 12, n. 1, p. 1, doi. 10.1038/s41467-021-22139-7

By:

Baca, Sylvan C.;
Takeda, David Y.;
Seo, Ji-Heui;
Hwang, Justin;
Ku, Sheng Yu;
Arafeh, Rand;
Arnoff, Taylor;
Agarwal, Supreet;
Bell, Connor;
O'Connor, Edward;
Qiu, Xintao;
Alaiwi, Sarah Abou;
Corona, Rosario I.;
Fonseca, Marcos A. S.;
Giambartolomei, Claudia;
Cejas, Paloma;
Lim, Klothilda;
He, Monica;
Sheahan, Anjali;
Nassar, Amin

Publication type:

Article

Non-coding somatic mutations converge on the PAX8 pathway in ovarian cancer.

Published in:

Nature Communications, 2020, v. 11, n. 1, p. 1, doi. 10.1038/s41467-020-15951-0

By:

Corona, Rosario I.;
Seo, Ji-Heui;
Lin, Xianzhi;
Hazelett, Dennis J.;
Reddy, Jessica;
Fonseca, Marcos A. S.;
Abassi, Forough;
Lin, Yvonne G.;
Mhawech-Fauceglia, Paulette Y.;
Shah, Sohrab P.;
Huntsman, David G.;
Gusev, Alexander;
Karlan, Beth Y.;
Berman, Benjamin P.;
Freedman, Matthew L.;
Gayther, Simon A.;
Lawrenson, Kate

Publication type:

Article