Works by Sensen, Christoph W.

Results: 46

Bioinformatics Visualization and Integration with Open Standards: The Bluejay Genomic Browser.

Published in:

In Silico Biology, 2005, v. 5, n. 2, p. 187

By:

Turinsky, Andrei L.;
Ah-Seng, Andrew C.;
Gordon, Paul M.K.;
Stromer, Julie N.;
Taschuk, Morgan L.;
Xu, Emily W.;
Sensen, Christoph W.

Publication type:

Article

Disease-specific motifs can be identified in circulating nucleic acids from live elk and cattle infected with transmissible spongiform encephalopathies.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 2, p. 550, doi. 10.1093/nar/gkn963

By:

Gordon, Paul M. K.;
Schütz, Ekkehard;
Beck, Julia;
Urnovitz, Howard B.;
Graham, Catherine;
Clark, Renee;
Dudas, Sandor;
Czub, Stefanie;
Sensen, Maria;
Brenig, Bertram;
Groschup, Martin H.;
Church, Robert B.;
Sensen, Christoph W.

Publication type:

Article

Osprey: a comprehensive tool employing novel methods for the design of oligonucleotides for DNA sequencing and microarrays.

Published in:

Nucleic Acids Research, 2004, v. 32, n. 17, p. e133, doi. 10.1093/nar/gnh127

By:

Gordon, Paul M. K.;
Sensen, Christoph W.

Publication type:

Article

CAVEman: Standardized anatomical context for biomedical data mapping.

Published in:

Anatomical Sciences Education, 2008, v. 1, n. 1, p. 10, doi. 10.1002/ase.3

By:

Turinsky, Andrei L.;
Fanea, Elena;
Trinh, Quang;
Wat, Stephen;
Hallgrímsson, Benedikt;
Dong, Xiaoli;
Shu, Xueling;
Stromer, Julie N.;
Hill, Jonathan W.;
Edwards, Carol;
Grosenick, Brenda;
Yajima, Masumi;
Sensen, Christoph W.

Publication type:

Article

The production of clonal and axenic cultures of microalgae using fluorescence-activated cell sorting.

Published in:

European Journal of Phycology, 1993, v. 28, n. 2, p. 93, doi. 10.1080/09670269300650151

By:

Sensen, Christoph W.;
Heimann, Kirsten;
Melkonian, Michael

Publication type:

Article

Gene transcript and metabolite profiling of elicitor-induced opium poppy cell cultures reveals the coordinate regulation of primary and secondary metabolism.

Published in:

Planta: An International Journal of Plant Biology, 2007, v. 225, n. 5, p. 1085, doi. 10.1007/s00425-006-0419-5

By:

Zulak, Katherine G.;
Cornish, Anthony;
Daskalchuk, Timothy E.;
Deyholos, Michael K.;
Goodenowe, Dayan B.;
Gordon, Paul M. K.;
Klassen, Darren;
Pelcher, Lawrence E.;
Sensen, Christoph W.;
Facchini, Peter J.

Publication type:

Article

Two different and highly organized mechanisms of translation initiation in the archaeon Sulfolobus solfataricus.

Published in:

Extremophiles, 2000, v. 4, n. 3, p. 175, doi. 10.1007/s007920070032

By:

Tolstrup, N.;
Sensen, Christoph W.;
Garrett, R. A.;
Clausen, I. G.

Publication type:

Article

Structure of a Berberine Bridge Enzyme-Like Enzyme with an Active Site Specific to the Plant Family Brassicaceae.

Published in:

PLoS ONE, 2016, v. 11, n. 6, p. 1, doi. 10.1371/journal.pone.0156892

By:

Daniel, Bastian;
Wallner, Silvia;
Steiner, Barbara;
Oberdorfer, Gustav;
Kumar, Prashant;
van der Graaff, Eric;
Roitsch, Thomas;
Sensen, Christoph W.;
Gruber, Karl;
Macheroux, Peter

Publication type:

Article

Methanotrophic bacteria in oilsands tailings ponds of northern Alberta.

Published in:

ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2013, v. 7, n. 5, p. 908, doi. 10.1038/ismej.2012.163

By:

Saidi-Mehrabad, Alireza;
He, Zhiguo;
Tamas, Ivica;
Sharp, Christine E;
Brady, Allyson L;
Rochman, Fauziah F;
Bodrossy, Levente;
Abell, Guy CJ;
Penner, Tara;
Dong, Xiaoli;
Sensen, Christoph W;
Dunfield, Peter F

Publication type:

Article

Mutations in ABC1 in Tangier disease and familial high-density lipoprotein deficiency.

Published in:

Nature Genetics, 1999, v. 22, n. 4, p. 336, doi. 10.1038/11905

By:

Brooks-Wilson, Angela;
Marcil, Michel;
Clee, Susanne M.;
Zhang, Lin-Hua;
Roomp, Kirsten;
van Dam, Marjel;
Yu, Lu;
Brewer, Carl;
Collins, Jennifer A.;
Molhuizen, Henri O.F.;
Loubser, Odell;
Ouelette, B.F. Francis;
Fichter, Keith;
Ashbourne-Excoffon, Katherine J.D.;
Sensen, Christoph W.;
Scherer, Stephen;
Mott, Stephanie;
Denis, Maxime;
Martindale, Duane

Publication type:

Article

NUCLEOTIDE SEQUENCES OF SMALL-SUBUNIT AND INTERNAL TRANSCRIBED SPACER REGIONS OF NUCLEAR [subR]RNA GENES SUPPORT THE AUTONOMY OF SOME GENES OF THE GELIDIALES (RHODOPHYTA).

Published in:

Journal of Phycology, 1998, v. 34, n. 2, p. 299, doi. 10.1046/j.1529-8817.1998.340299.x

By:

Patwary, Mohsin U.;
Sensen, Christoph W.;
MacKay, Ron M.;
van der Meer, John P.

Publication type:

Article

Benzene and Naphthalene Degrading Bacterial Communities in an Oil Sands Tailings Pond.

Published in:

Frontiers in Microbiology, 2017, p. 1, doi. 10.3389/fmicb.2017.01845

By:

Rochman, Fauziah F.;
Sheremet, Andriy;
Tamas, Ivica;
Saidi-Mehrabad, Alireza;
Joong-Jae Kim;
Xiaoli Dong;
Sensen, Christoph W.;
Gieg, Lisa M.;
Dunfield, Peter F.

Publication type:

Article

First insight into the genome of an uncultivated crenarchaeote from soil.

Published in:

Environmental Microbiology, 2002, v. 4, n. 10, p. 603, doi. 10.1046/j.1462-2920.2002.00345.x

By:

Quaiser, Achim;
Ochsenreiter, Torsten;
Klenk, Hans-Peter;
Kletzin, Arnulf;
Treusch, Alexander H.;
Meurer, Guido;
Eck, Jürgen;
Sensen, Christoph W.;
Schleper, Christa

Publication type:

Article

Microbial community and potential functional gene diversity involved in anaerobic hydrocarbon degradation and methanogenesis in an oil sands tailings pond<sup>1</sup>.

Published in:

Genome, 2013, v. 56, n. 10, p. 612, doi. 10.1139/gen-2013-0083

By:

An, Dongshan;
Brown, Damon;
Chatterjee, Indranil;
Dong, Xiaoli;
Ramos-Padron, Esther;
Wilson, Sandra;
Bordenave, Sylvain;
Caffrey, Sean M.;
Gieg, Lisa M.;
Sensen, Christoph W.;
Voordouw, Gerrit;
Scherer, Steve

Publication type:

Article

Metagenomic analysis of an anaerobic alkane-degrading microbial culture: potential hydrocarbon-activating pathways and inferred roles of community members<sup>1</sup>.

Published in:

Genome, 2013, v. 56, n. 10, p. 599, doi. 10.1139/gen-2013-0069

By:

Tan, Boonfei;
Dong, Xiaoli;
Sensen, Christoph W.;
Foght, Julia;
Scherer, Steve

Publication type:

Article

Genomic compartmentalization of gene families encoding core components of metazoan signaling systems.

Published in:

Genome, 2013, v. 56, n. 4, p. 215, doi. 10.1139/gen-2013-0021

By:

Wong, Howard;
Soh, Jung;
Gordon, Paul M.K.;
Yu, Tom;
Sensen, Christoph W.;
Parr, Edward;
Johnston, Randal N.;
Hilliker, A.

Publication type:

Article

Semantic Web Service provision: a realistic framework for Bioinformatics programmers.

Published in:

Bioinformatics, 2007, v. 23, n. 9, p. 1178, doi. 10.1093/bioinformatics/btm060

By:

Paul M.K. Gordon;
Quang Trinh;
Christoph W. Sensen

Publication type:

Article

Rhizobiales as functional and endosymbiontic members in the lichen symbiosis of Lobaria pulmonaria L.

Published in:

Frontiers in Microbiology, 2015, v. 6, p. 1, doi. 10.3389/fmicb.2015.00053

By:

Erlacher, Armin;
Cernava, Tomislav;
Cardinale, Massimiliano;
Jung Soh;
Sensen, Christoph W.;
Grube, Martin;
Berg, Gabriele

Publication type:

Article

Methanogenic toluene metabolism: community structure and intermediates.

Published in:

Environmental Microbiology, 2012, v. 14, n. 3, p. 754, doi. 10.1111/j.1462-2920.2011.02631.x

By:

Fowler, S. Jane;
Dong, Xiaoli;
Sensen, Christoph W.;
Suflita, Joseph M.;
Gieg, Lisa M.

Publication type:

Article

Instant Feedback Rapid Prototyping for GPU-Accelerated Computation, Manipulation, and Visualization of Multidimensional Data.

Published in:

International Journal of Biomedical Imaging, 2018, p. 1, doi. 10.1155/2018/2046269

By:

Malek, Maximilian;
Sensen, Christoph W.

Publication type:

Article

Estimating Cell Count and Distribution in Labeled Histological Samples Using Incremental Cell Search.

Published in:

International Journal of Biomedical Imaging, 2011, p. 1, doi. 10.1155/2011/874702

By:

Meruvia-Pastor, Oscar E.;
Jung Soh;
Schmidt, Eric J.;
Boughner, Julia C.;
Mei Xiao;
Jamniczky, Heather A.;
Hallgr´ımsson, Benedikt;
Sensen, Christoph W.

Publication type:

Article

Transcriptome Analysis of Thapsia laciniata Rouy Provides Insights into Terpenoid Biosynthesis and Diversity in Apiaceae.

Published in:

International Journal of Molecular Sciences, 2013, v. 14, n. 5, p. 9080, doi. 10.3390/ijms14059080

By:

Drew, Damian Paul;
Dueholm, Bjørn;
Weitzel, Corinna;
Ye Zhang;
Sensen, Christoph W.;
Simonsen, Henrik Toft

Publication type:

Article

SnowyOwl: accurate prediction of fungal genes by using RNA-Seq and homology information to select among ab initio models.

Published in:

BMC Bioinformatics, 2014, v. 15, n. 1, p. 1, doi. 10.1186/1471-2105-15-229

By:

Reid, Ian;
O'Toole, Nicholas;
Zabaneh, Omar;
Nourzadeh, Reza;
Dahdouli, Mahmoud;
Abdellateef, Mostafa;
Gordon, Paul M. K.;
Soh, Jung;
Butler, Gregory;
Sensen, Christoph W.;
Tsang, Adrian

Publication type:

Article

Seahawk: moving beyond HTML in Web-based bioinformatics analysis.

Published in:

BMC Bioinformatics, 2007, v. 8, p. 208, doi. 10.1186/1471-2105-8-208

By:

Gordon, Paul MK;
Sensen, Christoph W

Publication type:

Article

Phylogenetic Analysis of the ING Family of PHD Finger Proteins.

Published in:

Molecular Biology & Evolution, 2005, v. 22, n. 1, p. 104, doi. 10.1093/molbev/msh256

By:

He, Gordon H. Y.;
Helbing, Caren C.;
Wagner, Mary J.;
Sensen, Christoph W.;
Riabowol, Karl

Publication type:

Article

Enolase from Trypanosoma brucei, from the Amitochondriate Protist Mastigamoeba balamuthi, and from the Chloroplast and Cytosol of Euglena gracilis: Pieces in the Evolutionary Puzzle of the Eukaryotic Glycolytic Pathway.

Published in:

Molecular Biology & Evolution, 2000, v. 17, n. 7, p. 989, doi. 10.1093/oxfordjournals.molbev.a026395

By:

Hannaert, Véronique;
Brinkmann, Henner;
Nowitzki, Ulrich;
Lee, Jennifer A.;
Albert, Marie-Astrid;
Sensen, Christoph W.;
Gaasterland, Terry;
M, Miklós;
Michels, Paul;
Martin, William

Publication type:

Article

BRENDA in 2015: exciting developments in its 25th year of existence.

Published in:

Nucleic Acids Research, 2015, v. 43, n. D1, p. D439, doi. 10.1093/nar/gku1068

By:

Chang, Antje;
Schomburg, Ida;
Placzek, Sandra;
Jeske, Lisa;
Ulbrich, Marcus;
Xiao, Mei;
Sensen, Christoph W.;
Schomburg, Dietmar

Publication type:

Article

Microbial community succession in a bioreactor modeling a souring low-temperature oil reservoir subjected to nitrate injection.

Published in:

Applied Microbiology & Biotechnology, 2011, v. 91, n. 3, p. 799, doi. 10.1007/s00253-011-3287-2

By:

Callbeck, Cameron m.;
Xiaoli Dong;
Chatterjee, Indranil;
Agrawal, Akhil;
Caffrey, Sean M.;
Sensen, Christoph W.;
Voordouw, Gerrit

Publication type:

Article

Addressing proteolytic efficiency in enzymatic degradation therapy for celiac disease.

Published in:

Scientific Reports, 2016, p. 30980, doi. 10.1038/srep30980

By:

Rey, Martial;
Yang, Menglin;
Lee, Linda;
Zhang, Ye;
Sheff, Joey G.;
Sensen, Christoph W.;
Mrazek, Hynek;
Halada, Petr;
Man, Petr;
McCarville, Justin L;
Verdu, Elena F.;
Schriemer, David C.

Publication type:

Article

Addressing proteolytic efficiency in enzymatic degradation therapy for celiac disease.

Published in:

Scientific Reports, 2016, v. 6, n. 1, p. 1, doi. 10.1038/srep30980

By:

Rey, Martial;
Yang, Menglin;
Lee, Linda;
Zhang, Ye;
Sheff, Joey G.;
Sensen, Christoph W.;
Mrazek, Hynek;
Halada, Petr;
Man, Petr;
McCarville, Justin L;
Verdu, Elena F.;
Schriemer, David C.

Publication type:

Article

Transcriptome Profiling of Khat (Catha edulis) and Ephedra sinica Reveals Gene Candidates Potentially Involved in Amphetamine-Type Alkaloid Biosynthesis.

Published in:

PLoS ONE, 2015, v. 10, n. 3, p. 1, doi. 10.1371/journal.pone.0119701

By:

Groves, Ryan A.;
Hagel, Jillian M.;
Zhang, Ye;
Kilpatrick, Korey;
Levy, Asaf;
Marsolais, Frédéric;
Lewinsohn, Efraim;
Sensen, Christoph W.;
Facchini, Peter J.

Publication type:

Article

Diversity of Rumen Bacteria in Canadian Cervids.

Published in:

PLoS ONE, 2014, v. 9, n. 2, p. 1, doi. 10.1371/journal.pone.0089682

By:

Gruninger, Robert J.;
Sensen, Christoph W.;
McAllister, Timothy A.;
Forster, Robert J.

Publication type:

Article

Phylogenetic Analysis of the MS4A and TMEM176 Gene Families.

Published in:

PLoS ONE, 2010, v. 5, n. 2, p. 1, doi. 10.1371/journal.pone.0009369

By:

Zuccolo, Jonathan;
Bau, Jeremy;
Childs, Sarah J.;
Goss, Greg G.;
Sensen, Christoph W.;
Deans, Julie P.

Publication type:

Article

The Phylogenetic Position of the Pelobiont Mastigamoeba balamuthi Based on Sequences of rDNA and Translation Elongation Factors EF-1α and EF-2.

Published in:

Journal of Eukaryotic Microbiology, 2002, v. 49, n. 1, p. 1, doi. 10.1111/j.1550-7408.2002.tb00332.x

By:

ARISUE, NOBUKO;
HASHIMOTO, TETSUO;
LEE, JENNIFER A.;
MOORE, DOROTHY V.;
GORDON, PAUL;
SENSEN, CHRISTOPH W.;
GAASTERLAND, TERRY;
HASEGAWA, MASAMI;
MÜLLER, MIKLÓS

Publication type:

Article

Author Correction: Addressing proteolytic efficiency in enzymatic degradation therapy for celiac disease.

Published in:

2023

By:

Rey, Martial;
Yang, Menglin;
Lee, Linda;
Zhang, Ye;
Sheff, Joey G.;
Sensen, Christoph W.;
Mrazek, Hynek;
Halada, Petr;
Man, Petr;
McCarville, Justin L.;
Verdu, Elena F.;
Schriemer, David C.

Publication type:

Correction Notice

Cellular Immune Response Involving Multinucleated Giant Hemocytes with Two-Step Genome Amplification in the Drosophilid Zaprionus indianus.

Published in:

Journal of Innate Immunity, 2020, v. 12, n. 3, p. 257, doi. 10.1159/000502646

By:

Cinege, Gyöngyi;
Lerner, Zita;
Magyar, Lilla B.;
Soós, Bálint;
Tóth, Renáta;
Kristó, Ildikó;
Vilmos, Péter;
Juhász, Gábor;
Kovács, Attila L.;
Hegedűs, Zoltán;
Sensen, Christoph W.;
Kurucz, Éva;
Andó, István

Publication type:

Article

Expressed sequence tags from Madagascar periwinkle (Catharanthus roseus)

Published in:

FEBS Letters, 2006, v. 580, n. 18, p. 4501, doi. 10.1016/j.febslet.2006.07.020

By:

Murata, Jun;
Bienzle, Dorothee;
Brandle, Jim E.;
Sensen, Christoph W.;
De Luca, Vincenzo

Publication type:

Article

Unconventional microarray design reveals the response to obesity is largely tissue specific: analysis of common and divergent responses to diet-induced obesity in insulin-sensitive tissues.

Published in:

Applied Physiology, Nutrition & Metabolism, 2012, v. 37, n. 2, p. 257, doi. 10.1139/h11-159

By:

Lee, Robyn K.;
Hittel, Dustin S.;
Nyamandi, Vongai Z.;
Kang, Li;
Soh, Jung;
Sensen, Christoph W.;
Shearer, Jane

Publication type:

Article

Building generic anatomical models using virtual model cutting and iterative registration.

Published in:

BMC Medical Imaging, 2010, v. 10, p. 1, doi. 10.1186/1471-2342-10-5

By:

Mei Xiao;
Jung Soh;
Meruvia-Pastor, Oscar;
Schmidt, Eric;
Hallgrímsson, Benedikt;
Sensen, Christoph W.

Publication type:

Article

Interspecies data mining to predict novel ING-protein interactions in human.

Published in:

BMC Genomics, 2008, v. 9, p. 1, doi. 10.1186/1471-2164-9-426

By:

Gordon, Paul M. K.;
Soliman, Mohamed A.;
Bose, Pinaki;
Quang Trinh;
Sensen, Christoph W.;
Riabowol, Karl

Publication type:

Article

Enterobacteriaceae dominate the core microbiome and contribute to the resistome of arugula (Eruca sativa Mill.).

Published in:

Microbiome, 2019, v. 7, n. 1, p. N.PAG, doi. 10.1186/s40168-019-0624-7

By:

Cernava, Tomislav;
Erlacher, Armin;
Soh, Jung;
Sensen, Christoph W.;
Grube, Martin;
Berg, Gabriele

Publication type:

Article

Plasticity of a holobiont: desiccation induces fasting-like metabolism within the lichen microbiota.

Published in:

ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2019, v. 13, n. 2, p. 547, doi. 10.1038/s41396-018-0286-7

By:

Cernava, Tomislav;
Aschenbrenner, Ines Aline;
Soh, Jung;
Sensen, Christoph W.;
Grube, Martin;
Berg, Gabriele

Publication type:

Article

Comparative analysis of metagenomes from three methanogenic hydrocarbon-degrading enrichment cultures with 41 environmental samples.

Published in:

ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2015, v. 9, n. 9, p. 2028, doi. 10.1038/ismej.2015.22

By:

Tan, Boonfei;
Jane Fowler, S;
Laban, Nidal Abu;
Dong, Xiaoli;
Sensen, Christoph W;
Foght, Julia;
Gieg, Lisa M

Publication type:

Article

Exploring functional contexts of symbiotic sustain within lichen-associated bacteria by comparative omics.

Published in:

ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2015, v. 9, n. 2, p. 412, doi. 10.1038/ismej.2014.138

By:

Grube, Martin;
Cernava, Tomislav;
Soh, Jung;
Fuchs, Stephan;
Aschenbrenner, Ines;
Lassek, Christian;
Wegner, Uwe;
Becher, Dörte;
Riedel, Katharina;
Sensen, Christoph W;
Berg, Gabriele

Publication type:

Article

Transcriptome analysis of 20 taxonomically related benzylisoquinoline alkaloid-producing plants.

Published in:

BMC Plant Biology, 2015, v. 15, n. 1, p. 1, doi. 10.1186/s12870-015-0596-0

By:

Hagel, Jillian M.;
Morris, Jeremy S.;
Eun-Jeong Lee1;
Desgagné-Penix, Isabel;
Bross, Crystal D.;
Limei Chang;
Xue Chen;
Farrow, Scott C.;
Ye Zhang;
Jung Soh;
Sensen, Christoph W.;
Facchini, Peter J.

Publication type:

Article

Micro-computed tomography-based phenotypic approaches in embryology: procedural artifacts on assessments of embryonic craniofacial growth and development.

Published in:

BMC Developmental Biology, 2010, v. 10, p. 1, doi. 10.1186/1471-213X-10-18

By:

Schmidt, Eric J.;
Parsons, Trish E.;
Jamniczky, Heather A.;
Gitelman, Julian;
Trpkov, Cvett;
Boughner, Julia C.;
Logan, C. Cairine;
Sensen, Christoph W.;
Hallgrímsson, Benedikt

Publication type:

Article