Works by Segal, Mark R

Results: 74

The relationship of nasal disorders to lower respiratory tract symptoms and illness in a random sample of children.

Published in:

Pediatric Pulmonology, 1992, v. 14, n. 2, p. 91, doi. 10.1002/ppul.1950140206

By:

Barr, Marisa B.;
Weiss, Scott T.;
Segal, Mark R.;
Tager, Ira B.;
Speizer, Frank E.

Publication type:

Article

Development and Validation of a Prognostic Index for 4-Year Mortality in Older Adults.

Published in:

JAMA: Journal of the American Medical Association, 2006, v. 295, n. 7, p. 801, doi. 10.1001/jama.295.7.801

By:

Lee, Sei J.;
Lindquist, Karla;
Segal, Mark R.;
Covinsky, Kenneth E.

Publication type:

Article

Residual-based tree-structured survival analysis.

Published in:

2002

By:

Keleş, Sündüz;
Segal, Mark R.;
Keleş, Sündüz

Publication type:

journal article

Maternal smoking during pregnancy and birth outcomes with weight gain adjustments via varying-coefficient models.

Published in:

1997

By:

Segal, Mark R.;
Wight, Suzanne;
Hanrahan, John P.;
Tager, Ira B.;
Segal, M R;
Wight, S;
Hanrahan, J P;
Tager, I B

Publication type:

journal article

Design effects for binary regression models fitted to dependent data.

Published in:

Statistics in Medicine, 1993, v. 12, n. 13, p. 1259, doi. 10.1002/sim.4780121307

By:

Neuhaus, John M.;
Segal, Mark R.

Publication type:

Article

Design effects for binary regression models fitted to dependent data.

Published in:

Statistics in Medicine, 1993, v. 12, n. 11, p. 1259, doi. 10.1002/sim.4780121107

By:

Neuhaus, John M.;
Segal, Mark R.

Publication type:

Article

Monocyte Activation by Interferon α Is Associated With Failure to Achieve a Sustained Virologic Response After Treatment for Hepatitis C Virus Infection.

Published in:

Journal of Infectious Diseases, 2014, v. 209, n. 10, p. 1602, doi. 10.1093/infdis/jit801

By:

Hartigan-O'Connor, Dennis J.;
Lin, Din;
Ryan, James C.;
Shvachko, Valentina A.;
Cozen, Myrna L.;
Segal, Mark R.;
Terrault, Norah A.;
Lanier, Lewis L.;
Manos, M. Michele;
McCune, Joseph M.

Publication type:

Article

Assessing stationary distributions derived from chromatin contact maps.

Published in:

BMC Bioinformatics, 2020, v. 21, n. 1, p. 1, doi. 10.1186/s12859-020-3424-y

By:

Segal, Mark R.;
Fletez-Brant, Kipper

Publication type:

Article

Can 3D diploid genome reconstruction from unphased Hi-C data be salvaged?

Published in:

NAR Genomics & Bioinformatics, 2022, v. 4, n. 2, p. 1, doi. 10.1093/nargab/lqac038

By:

Segal, Mark R

Publication type:

Article

Accommodating error analysis in comparison and clustering of molecular fingerprints.

Published in:

1998

By:

Salamon, Hugh;
Segal, Mark R.;
Ponce de Leon, Alfredo;
Small, Peter M.;
Salamon, H;
Segal, M R;
Ponce de Leon, A;
Small, P M

Publication type:

journal article

Traffic-Related Air Pollution and All-Cause Mortality during Tuberculosis Treatment in California.

Published in:

Environmental Health Perspectives, 2017, v. 125, n. 9, p. 1, doi. 10.1289/EHP1699

By:

Blount, Robert J.;
Pascopella, Lisa;
Catanzaro, Donald G.;
Barry, Pennan M.;
English, Paul B.;
Segal, Mark R.;
Flood, Jennifer;
Meltzer, Dan;
Jones, Brenda;
Balmes, John;
Nahid, Payam

Publication type:

Article

The Relationship Between Self-Rated Health and Mortality in Older Black and White Americans.

Published in:

Journal of the American Geriatrics Society, 2007, v. 55, n. 10, p. 1624, doi. 10.1111/j.1532-5415.2007.01360.x

By:

Lee, Sei J.;
Moody-Ayers, Sandra Y.;
Landefeld, C. Seth;
Walter, Louise C.;
Lindquist, Karla;
Segal, Mark R.;
Covinsky, Kenneth E.

Publication type:

Article

Indoor Air Pollution and Susceptibility to Tuberculosis Infection in Urban Vietnamese Children.

Published in:

2021

By:

Blount, Robert J.;
Ha Phan;
Trang Trinh;
Hai Dang;
Merrifield, Cindy;
Zavala, Michael;
Zabner, Joseph;
Comellas, Alejandro P.;
Stapleton, Emma M.;
Segal, Mark R.;
Balmes, John;
Nhung, Nguyen Viet;
Nahid, Payam;
Phan, Ha;
Trinh, Trang;
Dang, Hai

Publication type:

journal article

Immune Response and Mortality Risk Relate to Distinct Lung Microbiomes in Patients with HIV and Pneumonia.

Published in:

2017

By:

Shenoy, Meera K.;
Iwai, Shoko;
Lin, Din L.;
Worodria, William;
Ayakaka, Irene;
Byanyima, Patrick;
Kaswabuli, Sylvia;
Fong, Serena;
Stone, Stephen;
Chang, Emily;
Davis, J. Lucian;
Faruqi, Ali Ahmad;
Segal, Mark R.;
Huang, Laurence;
Lynch, Susan V.

Publication type:

journal article

Distance-based assessment of the localization of functional annotations in 3D genome reconstructions.

Published in:

BMC Genomics, 2014, v. 15, n. 1, p. 1, doi. 10.1186/1471-2164-15-992

By:

Capurso, Daniel;
Segal, Mark R.

Publication type:

Article

A histone arginine methylation localizes to nucleosomes in satellite II and III DNA sequences in the human genome.

Published in:

BMC Genomics, 2012, v. 13, n. 1, p. 630, doi. 10.1186/1471-2164-13-630

By:

Capurso, Daniel;
Hao Xiong;
Segal, Mark R.

Publication type:

Article

Identification of Yeast Transcriptional Regulation Networks Using Multivariate Random Forests.

Published in:

PLoS Computational Biology, 2009, v. 5, n. 6, p. 1, doi. 10.1371/journal.pcbi.1000414

By:

Yuanyuan Xiao;
Segal, Mark R.

Publication type:

Article

Analysis of a Splice Array Experiment Elucidates Roles of Chromatin Elongation Factor Spt4-5 in Splicing.

Published in:

PLoS Computational Biology, 2005, v. 1, n. 4, p. 276, doi. 10.1371/journal.pcbi.0010039

By:

Yuanyuan Xiao;
Yang, Yee H.;
Burckin, Todd A.;
Shiue, Lily;
Hartzog, Grant A.;
Segal, Mark R.;
Bourne, Philip E.

Publication type:

Article

Frailty Among Patients Receiving Hemodialysis: Evolution of Components and Associations With Mortality.

Published in:

2019

By:

Johansen, Kirsten L;
Delgado, Cynthia;
Kaysen, George A;
Chertow, Glenn M;
Chiang, Janet;
Dalrymple, Lorien S;
Segal, Mark R;
Grimes, Barbara A

Publication type:

journal article

Improved accuracy assessment for 3D genome reconstructions.

Published in:

BMC Bioinformatics, 2018, v. 19, n. 1, p. 1, doi. 10.1186/s12859-018-2214-2

By:

Segal, Mark R.;
Bengtsson, Henrik L.

Publication type:

Article

THE AUTHORS REPLY.

Published in:

American Journal of Epidemiology, 2005, v. 162, n. 2, p. 196, doi. 10.1093/aje/kwi177

By:

Bacchetti, Peter;
Wolf, Leslie E.;
Segal, Mark R.;
McCulloch, Charles E.

Publication type:

Article

Bacchetti et al. Respond to “Ethics and Sample Size—Another View”.

Published in:

American Journal of Epidemiology, 2005, v. 161, n. 2, p. 113, doi. 10.1093/aje/kwi016

By:

Bacchetti, Peter;
Wolf, Leslie E.;
Segal, Mark R.;
McCulloch, Charles E.

Publication type:

Article

Ethics and Sample Size.

Published in:

American Journal of Epidemiology, 2005, v. 161, n. 2, p. 105, doi. 10.1093/aje/kwi014

By:

Bacchetti, Peter;
Wolf, Leslie E.;
Segal, Mark R.;
McCulloch, Charles E.

Publication type:

Article

Weiss et al. Reply to “Invited Commentary: Why Does the White Blood Cell Count Predict Mortality?”.

Published in:

American Journal of Epidemiology, 1995, v. 142, n. 5, p. 502, doi. 10.1093/oxfordjournals.aje.a117667

By:

Weiss, Scott T.;
Segal, Mark R.;
Sparrow, David;
Wager, Carrie

Publication type:

Article

Relation of FEV1 and Peripheral Blood Leukocyte Count to Total Mortality.

Published in:

American Journal of Epidemiology, 1995, v. 142, n. 5, p. 493, doi. 10.1093/oxfordjournals.aje.a117665

By:

Weiss, Scott T.;
Segal, Mark R.;
Sparrow, David;
Wager, Carrie

Publication type:

Article

Querying Genomic Databases: Refining the Connectivity Map.

Published in:

Statistical Applications in Genetics & Molecular Biology, 2012, v. 11, n. 2, p. 1, doi. 10.2202/1544-6115.1715

By:

Segal, Mark R.;
Hao Xiong;
Bengtsson, Henrik;
Bourgon, Richard;
Gentleman, Robert

Publication type:

Article

Re-Cracking the Nucleosome Positioning Code.

Published in:

Statistical Applications in Genetics & Molecular Biology, 2008, v. 7, n. 1, p. 1, doi. 10.2202/1544-6115.1367

By:

Segal, Mark R.

Publication type:

Article

Validation in Genomics: CpG Island Methylation Revisited.

Published in:

Statistical Applications in Genetics & Molecular Biology, 2006, v. 5, n. 1, p. 1, doi. 10.2202/1544-6115.1256

By:

Segal, Mark R.

Publication type:

Article

Prediction of Genomewide Conserved Epitope Profiles of HIV-1: Classifier Choice and Peptide Representation.

Published in:

Statistical Applications in Genetics & Molecular Biology, 2005, v. 4, n. 1, p. 1, doi. 10.2202/1544-6115.1158

By:

Yuanyuan Xiao;
Segal, Mark R.

Publication type:

Article

Stepwise Normalization of Two-Channel Spotted Microarrays.

Published in:

Statistical Applications in Genetics & Molecular Biology, 2005, v. 4, n. 1, p. 1, doi. 10.2202/1544-6115.1117

By:

Yuanyuan Xiao;
Segal, Mark R.;
Yee Hwa Yang

Publication type:

Article

Relating HIV-1 Sequence Variation to Replication Capacity via Trees and Forests.

Published in:

Statistical Applications in Genetics & Molecular Biology, 2004, v. 3, n. 1, p. 1, doi. 10.2202/1544-6115.1031

By:

Segal, Mark R.;
Barbour, Jason D.;
Grant, Robert M.

Publication type:

Article

The Rabl configuration limits topological entanglement of chromosomes in budding yeast.

Published in:

Scientific Reports, 2019, v. 9, n. 1, p. N.PAG, doi. 10.1038/s41598-019-42967-4

By:

Pouokam, Maxime;
Cruz, Brian;
Burgess, Sean;
Segal, Mark R.;
Vazquez, Mariel;
Arsuaga, Javier

Publication type:

Article

Does Familial Non-Medullary Thyroid Cancer Adversely Affect Survival?

Published in:

World Journal of Surgery, 2006, v. 30, n. 5, p. 787, doi. 10.1007/s00268-005-0398-x

By:

Triponez, Frederic;
Wong, Mariwil;
Sturgeon, Cord;
Caron, Nadine;
Ginzinger, David G.;
Segal, Mark R.;
Kebebew, Electron;
Quan-Yang Duh;
Clark, Orlo H.

Publication type:

Article

Does multi-way, long-range chromatin contact data advance 3D genome reconstruction?

Published in:

BMC Bioinformatics, 2023, v. 24, n. 1, p. 1, doi. 10.1186/s12859-023-05170-x

By:

Olshen, Adam B.;
Segal, Mark R.

Publication type:

Article

On E-values for tandem MS scoring schemes.

Published in:

2008

By:

Segal, Mark R.

Publication type:

Letter

Biological sequence classification utilizing positive and unlabeled data.

Published in:

Bioinformatics, 2008, v. 24, n. 9, p. 1198, doi. 10.1093/bioinformatics/btn089

By:

Yuanyuan Xiao;
Mark R. Segal

Publication type:

Article

A multi-array multi-SNP genotyping algorithm for Affymetrix SNP microarrays.

Published in:

Bioinformatics, 2007, v. 23, n. 12, p. 1459, doi. 10.1093/bioinformatics/btm131

By:

Yuanyuan Xiao;
Mark R. Segal;
Y.H. Yang;
Ru-Fang Yeh

Publication type:

Article

Analytical and Biological Variability of a Commercial Modified Aptamer Assay in Plasma Samples of Patients with Chronic Kidney Disease.

Published in:

Journal of Applied Laboratory Medicine, 2023, v. 8, n. 3, p. 491, doi. 10.1093/jalm/jfac145

By:

Dubin, Ruth F;
Deo, Rajat;
Ren, Yue;
Lee, Hongzhe;
Shou, Haochang;
Feldman, Harold;
Kimmel, Paul;
Waikar, Sushrut S;
Rhee, Eugene P;
Tin, Adrienne;
Chen, Jingsha;
Coresh, Joseph;
Go, Alan S;
Kelly, Tanika;
Rao, Paduranga S;
Chen, Teresa K;
Segal, Mark R;
Ganz, Peter

Publication type:

Article

Extending the elements of tree-structured regression.

Published in:

1995

By:

Segal, Mark R;
Segal, M R

Publication type:

journal article

Metabolomics of Oxidative Stress in Recent Studies of Endogenous and Exogenously Administered Intermediate Metabolites.

Published in:

International Journal of Molecular Sciences, 2011, v. 12, n. 10, p. 6469, doi. 10.3390/ijms12106469

By:

Jia Liu;
Litt, Lawrence;
Segal, Mark R.;
Kelly, Mark J. S.;
Pelton, Jeffrey G.;
Myungwon Kim

Publication type:

Article

Reconstruction of 3D genome architecture via a two-stage algorithm.

Published in:

BMC Bioinformatics, 2015, v. 16, p. 1, doi. 10.1186/s12859-015-0799-2

By:

Segal, Mark R.;
Bengtsson, Henrik L.

Publication type:

Article

Genomic anatomy of the specific reciprocal translocation t(15;17) in acute promyelocytic leukemia.

Published in:

Genes, Chromosomes & Cancer, 2003, v. 36, n. 2, p. 175, doi. 10.1002/gcc.10154

By:

Reiter, Andreas;
Sauβele, Susanne;
Grimwade, David;
Wiemels, Joseph L.;
Segal, Mark R.;
Lafage-Pochitaloff, Marina;
Walz, Christoph;
Weisser, Andreas;
Hochhaus, Andreas;
Willer, Andreas;
Reichert, Anja;
Büchner, Thomas;
Lengfelder, Eva;
Hehlmann, Rüdiger;
Cross, Nicholas C.P.

Publication type:

Article

Discovering hotspots in functional genomic data superposed on 3D chromatin configuration reconstructions.

Published in:

Nucleic Acids Research, 2016, v. 44, n. 5, p. 2028, doi. 10.1093/nar/gkw070

By:

Capurso, Daniel;
Bengtsson, Henrik;
Segal, Mark R.

Publication type:

Article

Composition and origin of lung fluid proteome in premature infants and relationship to respiratory outcome.

Published in:

PLoS ONE, 2020, v. 15, n. 12, p. 1, doi. 10.1371/journal.pone.0243168

By:

Ballard, Philip L.;
Oses-Prieto, Juan;
Chapin, Cheryl;
Segal, Mark R.;
Ballard, Roberta A.;
Burlingame, Alma L.

Publication type:

Article

Epigenomic profiling of newborns with isolated orofacial clefts reveals widespread DNA methylation changes and implicates metastable epiallele regions in disease risk.

Published in:

Epigenetics, 2019, v. 14, n. 2, p. 198, doi. 10.1080/15592294.2019.1581591

By:

Gonseth, Semira;
Shaw, Gary M.;
Roy, Ritu;
Segal, Mark R.;
Asrani, Kripa;
Rine, Jasper;
Wiemels, Joseph;
Marini, Nicholas J.

Publication type:

Article

Being 'underpowered' does not make a study unethical.

Published in:

Statistics in Medicine, 2012, v. 31, n. 29, p. 4138, doi. 10.1002/sim.5451

By:

Bacchetti, Peter;
McCulloch, Charles;
Segal, Mark R.

Publication type:

Article

Inclusion body formation reduces levels of mutant huntingtin and the risk of neuronal death.

Published in:

Nature, 2004, v. 431, n. 7010, p. 805, doi. 10.1038/nature02998

By:

Arrasate, Montserrat;
Mitra, Siddhartha;
Schweitzer, Erik S.;
Segal, Mark R.;
Finkbeiner, Steven

Publication type:

Article

Assessing chromatin relocalization in 3D using the patient rule induction method.

Published in:

Biostatistics, 2023, v. 24, n. 3, p. 618, doi. 10.1093/biostatistics/kxab033

By:

Segal, Mark R

Publication type:

Article

Principal curve approaches for inferring 3D chromatin architecture.

Published in:

2022

By:

Tuzhilina, Elena;
Hastie, Trevor J;
Segal, Mark R

Publication type:

journal article

Reproducibility of 3D chromatin configuration reconstructions.

Published in:

Biostatistics, 2014, v. 15, n. 3, p. 442, doi. 10.1093/biostatistics/kxu003

By:

Segal, Mark R.;
Xiong, Hao;
Capurso, Daniel;
Vazquez, Mariel;
Arsuaga, Javier

Publication type:

Article