Works by Scotti, Ivan

Results: 45

Population genetic structure and demographic history of the timber tree Dicorynia guianensis in French Guiana.

Published in:

Tree Genetics & Genomes, 2024, v. 20, n. 1, p. 1, doi. 10.1007/s11295-023-01633-7

By:

Bonnier, Julien;
Tysklind, Niklas;
Troispoux, Valérie;
Scotti, Ivan;
Barthe, Stéphanie;
Brunaux, Olivier;
Guitet, Stéphane;
Traissac, Stéphane;
Heuertz, Myriam

Publication type:

Article

Recent, Late Pleistocene fragmentation shaped the phylogeographic structure of the European black pine (Pinus nigra Arnold).

Published in:

Tree Genetics & Genomes, 2019, v. 15, n. 5, p. N.PAG, doi. 10.1007/s11295-019-1381-2

By:

Scotti-Saintagne, Caroline;
Giovannelli, Guia;
Scotti, Ivan;
Roig, Anne;
Spanu, Ilaria;
Vendramin, Giovanni Giuseppe;
Guibal, Frédéric;
Fady, Bruno

Publication type:

Article

Phylogeography of a species complex of lowland Neotropical rain forest trees ( Carapa, Meliaceae).

Published in:

Journal of Biogeography, 2013, v. 40, n. 4, p. 676, doi. 10.1111/j.1365-2699.2011.02678.x

By:

Scotti‐Saintagne, Caroline;
Dick, Christopher W.;
Caron, Henri;
Vendramin, Giovanni G.;
Guichoux, Erwan;
Buonamici, Anna;
Duret, Caroline;
Sire, Pierre;
Valencia, Renato;
Lemes, Maristerra R.;
Gribel, Rogério;
Scotti, Ivan

Publication type:

Article

Amazon diversification and cross-Andean dispersal of the widespread Neotropical tree species Jacaranda copaia (Bignoniaceae).

Published in:

Journal of Biogeography, 2013, v. 40, n. 4, p. 707, doi. 10.1111/j.1365-2699.2012.02797.x

By:

Scotti‐Saintagne, Caroline;
Dick, Christopher W.;
Caron, Henri;
Vendramin, Giovanni G.;
Troispoux, Valérie;
Sire, Pierre;
Casalis, Maxime;
Buonamici, Anna;
Valencia, Renato;
Lemes, Maristerra R.;
Gribel, Rogerio;
Scotti, Ivan;
Ebach, Malte

Publication type:

Article

High-throughput transcriptome sequencing and preliminary functional analysis in four Neotropical tree species.

Published in:

BMC Genomics, 2014, v. 15, n. 1, p. 1, doi. 10.1186/1471-2164-15-238

By:

Brousseau, Louise;
Tinaut, Alexandra;
Duret, Caroline;
Lang, Tiange;
Garnier-Gere, Pauline;
Scotti, Ivan

Publication type:

Article

Auquaporins in the wild: natural genetic diversity and selective pressure in the PIP gene family in five Neotropical tree species.

Published in:

BMC Evolutionary Biology, 2010, v. 10, p. 202, doi. 10.1186/1471-2148-10-202

By:

Audigeos, Delphine;
Buonamici, Anna;
Belkadi, Laurent;
Rymer, Paul;
Boshier, David;
Scotti-Saintagne, Caroline;
Vendramin, Giovanni G.;
Scotti, Ivan

Publication type:

Article

The interplay of dispersal limitation, rivers, and historical events shapes the genetic structure of an Amazonian frog.

Published in:

Biological Journal of the Linnean Society, 2012, v. 106, n. 2, p. 356, doi. 10.1111/j.1095-8312.2012.01871.x

By:

FOUQUET, ANTOINE;
LEDOUX, JEAN-BAPTISTE;
DUBUT, VINCENT;
NOONAN, BRICE P.;
SCOTTI, IVAN

Publication type:

Article

Common microgeographical selection patterns revealed in four European conifers.

Published in:

Molecular Ecology, 2023, v. 32, n. 2, p. 393, doi. 10.1111/mec.16750

By:

Scotti, Ivan;
Lalagüe, Hadrien;
Oddou‐Muratorio, Sylvie;
Scotti‐Saintagne, Caroline;
Ruiz Daniels, Rose;
Grivet, Delphine;
Lefevre, François;
Cubry, Philippe;
Fady, Bruno;
González‐Martínez, Santiago C.;
Roig, Anne;
Lesur‐Kupin, Isabelle;
Bagnoli, Francesca;
Guerin, Vanina;
Plomion, Christophe;
Rozenberg, Philippe;
Vendramin, Giovanni G.

Publication type:

Article

Genetic signatures of divergent selection in European beech (Fagus sylvatica L.) are associated with the variation in temperature and precipitation across its distribution range.

Published in:

Molecular Ecology, 2021, v. 30, n. 20, p. 5029, doi. 10.1111/mec.16115

By:

Postolache, Dragos;
Oddou‐Muratorio, Sylvie;
Vajana, Elia;
Bagnoli, Francesca;
Guichoux, Erwan;
Hampe, Arndt;
Le Provost, Gregoire;
Lesur, Isabelle;
Popescu, Flaviu;
Scotti, Ivan;
Piotti, Andrea;
Vendramin, Giovanni G.

Publication type:

Article

Genomic and phenotypic divergence unveil microgeographic adaptation in the Amazonian hyperdominant tree Eperua falcata Aubl. (Fabaceae).

Published in:

Molecular Ecology, 2021, v. 30, n. 5, p. 1136, doi. 10.1111/mec.15595

By:

Brousseau, Louise;
Fine, Paul V. A.;
Dreyer, Erwin;
Vendramin, Giovanni G.;
Scotti, Ivan

Publication type:

Article

Tropical rainforests that persisted: inferences from the Quaternary demographic history of eight tree species in the Guiana shield.

Published in:

Molecular Ecology, 2017, v. 26, n. 4, p. 1161, doi. 10.1111/mec.13949

By:

Barthe, Stéphanie;
Binelli, Giorgio;
Hérault, Bruno;
Scotti‐Saintagne, Caroline;
Sabatier, Daniel;
Scotti, Ivan

Publication type:

Article

A 14-year series of leaf phenological data collected for European beech (Fagus sylvatica L.) and silver fir (Abies alba Mill.) from their geographic range margins in south-eastern France.

Published in:

Annals of Forest Science (BioMed Central), 2023, v. 80, n. 1, p. 1, doi. 10.1186/s13595-023-01193-9

By:

Jean, Frederic;
Davi, Hendrik;
Oddou-Muratorio, Sylvie;
Fady, Bruno;
Scotti, Ivan;
Scotti-Saintagne, Caroline;
Ruffault, Julien;
Journe, Valentin;
Clastre, Philippe;
Marloie, Olivier;
Brunetto, William;
Correard, Marianne;
Gilg, Olivier;
Pringarbe, Mehdi;
Rei, Franck;
Thevenet, Jean;
Turion, Norbert;
Pichot, Christian

Publication type:

Article

Science needs management data for a better prediction of climate change effects on socio-ecosystems.

Published in:

Annals of Forest Science (BioMed Central), 2019, v. 76, n. 1, p. 1, doi. 10.1007/s13595-018-0792-9

By:

Fady, Bruno;
Geburek, Thomas;
Scotti, Ivan

Publication type:

Article

Fifty years of genetic studies: what to make of the large amounts of variation found within populations?

Published in:

Annals of Forest Science (BioMed Central), 2016, v. 73, n. 1, p. 69, doi. 10.1007/s13595-015-0471-z

By:

Scotti, Ivan;
González-Martínez, Santiago;
Budde, Katharina;
Lalagüe, Hadrien

Publication type:

Article

Forest tree genomics: 10 achievements from the past 10 years and future prospects.

Published in:

Annals of Forest Science (BioMed Central), 2016, v. 73, n. 1, p. 77, doi. 10.1007/s13595-015-0488-3

By:

Plomion, Christophe;
Bastien, Catherine;
Bogeat-Triboulot, Marie-Béatrice;
Bouffier, Laurent;
Déjardin, Annabelle;
Duplessis, Sébastien;
Fady, Bruno;
Heuertz, Myriam;
Gac, Anne-Laure;
Provost, Grégoire;
Legué, Valérie;
Lelu-Walter, Marie-Anne;
Leplé, Jean-Charles;
Maury, Stéphane;
Morel, Alexandre;
Oddou-Muratorio, Sylvie;
Pilate, Gilles;
Sanchez, Léopoldo;
Scotti, Ivan;
Scotti-Saintagne, Caroline

Publication type:

Article

Life after disturbance (II): the intermediate disturbance hypothesis explains genetic variation in forest gaps dominated by Virola michelii Heckel (Myristicaceae).

Published in:

Annals of Forest Science (BioMed Central), 2015, v. 72, n. 8, p. 1035, doi. 10.1007/s13595-015-0508-3

By:

Scotti, Ivan;
Montaigne, William;
Cseke, Klára;
Traissac, Stéphane

Publication type:

Article

Life after disturbance (I): changes in the spatial genetic structure of Jacaranda copaia (Aubl.) D. Don (Bignonianceae) after logging in an intensively studied plot in French Guiana.

Published in:

Annals of Forest Science (BioMed Central), 2015, v. 72, n. 5, p. 509, doi. 10.1007/s13595-015-0462-0

By:

Leclerc, Thomas;
Vimal, Ruppert;
Troispoux, Valérie;
Périgon, Sophie;
Scotti, Ivan

Publication type:

Article

RaBoT: a rarefaction-by-bootstrap method to compare genome-wide levels of genetic diversity.

Published in:

Annals of Forest Science (BioMed Central), 2013, v. 70, n. 6, p. 631, doi. 10.1007/s13595-013-0302-z

By:

Scotti, Ivan;
Montaigne, William;
Cseke, Klára;
Traissac, Stéphane

Publication type:

Article

Adaptive potential in forest tree populations: what is it, and how can we measure it?

Published in:

2010

By:

Scotti, Ivan

Publication type:

Letter

Interactions between microenvironment, selection and genetic architecture drive multiscale adaptation in a simulation experiment.

Published in:

Journal of Evolutionary Biology, 2022, v. 35, n. 3, p. 451, doi. 10.1111/jeb.13988

By:

Cubry, Philippe;
Oddou‐Muratorio, Sylvie;
Scotti, Ivan;
Lefèvre, François

Publication type:

Article

Generalization of the Q<sub>ST</sub> framework in hierarchically structured populations: Impacts of inbreeding and dominance.

Published in:

Molecular Ecology Resources, 2017, v. 17, n. 6, p. e76, doi. 10.1111/1755-0998.12693

By:

Cubry, Philippe;
Scotti, Ivan;
Oddou ‐ Muratorio, Sylvie;
Lefèvre, François

Publication type:

Article

Development of genomic tools in a widespread tropical tree, Symphonia globulifera L.f.: a new low-coverage draft genome, SNP and SSR markers.

Published in:

Molecular Ecology Resources, 2017, v. 17, n. 4, p. 614, doi. 10.1111/1755-0998.12605

By:

Olsson, Sanna;
Seoane‐Zonjic, Pedro;
Bautista, Rocío;
Claros, M. Gonzalo;
González‐Martínez, Santiago C.;
Scotti, Ivan;
Scotti‐Saintagne, Caroline;
Hardy, Olivier J.;
Heuertz, Myriam

Publication type:

Article

Adaptation of forest trees to climate change.

Published in:

2011

By:

Plomion, Christophe;
Scotti, Ivan;
Delzon, Sylvain;
Gion, Jean-Marc

Publication type:

Abstract

Highly local environmental variability promotes intrapopulation divergence of quantitative traits: an example from tropical rain forest trees.

Published in:

Annals of Botany, 2013, v. 112, n. 6, p. 1169, doi. 10.1093/aob/mct176

By:

Brousseau, Louise;
Bonal, Damien;
Cigna, Jeremy;
Scotti, Ivan

Publication type:

Article

Mechanosensing of stem bending and its interspecific variability in five neotropical rainforest species.

Published in:

Annals of Botany, 2010, v. 105, n. 2, p. 341, doi. 10.1093/aob/mcp286

By:

Coutand, Catherine;
Chevolot, Malia;
Lacointe, André;
Rowe, Nick;
Scotti, Ivan

Publication type:

Article

Estimation of contemporary effective population size in plant populations: Limitations of genomic datasets.

Published in:

Evolutionary Applications, 2024, v. 17, n. 5, p. 1, doi. 10.1111/eva.13691

By:

Gargiulo, Roberta;
Decroocq, Véronique;
González‐Martínez, Santiago C.;
Paz‐Vinas, Ivan;
Aury, Jean‐Marc;
Lesur Kupin, Isabelle;
Plomion, Christophe;
Schmitt, Sylvain;
Scotti, Ivan;
Heuertz, Myriam

Publication type:

Article

AFLP markers and cytotaxonomic analysis reveal hybridisation in the genus Schoenus (Cyperaceae).

Published in:

Genome, 2002, v. 45, n. 2, p. 222, doi. 10.1139/g01-138

By:

Scotti, Ivan;
Mariani, Anna;
Verona, Valentino;
Candolini, Alberto;
Cenci, Carlo A;
Olivieri, Angelo M

Publication type:

Article

Genomic Patterns of Adaptive Divergence between Chromosomally Differentiated Sunflower Species.

Published in:

Molecular Biology & Evolution, 2009, v. 26, n. 6, p. 1341, doi. 10.1093/molbev/msp043

By:

Strasburg, Jared L.;
Scotti-Saintagne, Caroline;
Scotti, Ivan;
Zhao Lai;
Rieseberg, Loren H.

Publication type:

Article

Genomic responses to climate: Understanding local adaptation in the Andean tree species Nothofagus pumilio and implications for a changing world.

Published in:

Plants, People, Planet, 2024, v. 6, n. 4, p. 902, doi. 10.1002/ppp3.10504

By:

Sekely, Jill;
Marchelli, Paula;
Arana, Verónica;
Dauphin, Benjamin;
Mattera, María Gabriela;
Pastorino, Mario;
Scotti, Ivan;
Soliani, Carolina;
Heer, Katrin;
Opgenoorth, Lars

Publication type:

Article

Inheritance and diversity of simple sequence repeat (SSR) microsatellite markers in various families of Picea abies.

Published in:

Hereditas, 2003, v. 138, n. 3, p. 219, doi. 10.1034/j.1601-5223.2003.01524.x

By:

YAZDANI, REZA;
SCOTTI, IVAN;
JANSSON, GUNNAR;
PLOMION, CHRISTOPHE;
MATHUR, GAURAV

Publication type:

Article

Genetic Structure of a Worldwide Germplasm Collection of Prunus armeniaca L. Reveals Three Major Diffusion Routes for Varieties Coming From the Species' Center of Origin.

Published in:

Frontiers in Plant Science, 2020, v. 11, p. 1, doi. 10.3389/fpls.2020.00638

By:

Bourguiba, Hedia;
Scotti, Ivan;
Sauvage, Christopher;
Zhebentyayeva, Tetyana;
Ledbetter, Craig;
Krška, Boris;
Remay, Arnaud;
D'Onofrio, Claudio;
Iketani, Hiroyuki;
Christen, Danilo;
Krichen, Lamia;
Trifi-Farah, Neila;
Liu, Weisheng;
Roch, Guillaume;
Audergon, Jean-Marc

Publication type:

Article

THE GENOMIC ARCHITECTURE OF SEXUAL DIMORPHISM IN THE DIOECIOUS PLANT SILENE LATIFOLIA.

Published in:

Evolution, 2010, v. 64, n. 10, p. 2873, doi. 10.1111/j.1558-5646.2010.01048.x

By:

Delph, Lynda F .;
Arntz, A. Michele;
Scotti-Saintagne, Caroline;
Scotti, Ivan

Publication type:

Article

GENETICALLY DEPAUPERATE BUT WIDESPREAD: THE CASE OF AN EMBLEMATIC MEDITERRANEAN PINE.

Published in:

Evolution, 2008, v. 62, n. 3, p. 680, doi. 10.1111/j.1558-5646.2007.00294.x

By:

Vendramin, Giovanni G.;
Fady, Bruno;
González-Martínez, Santiago C.;
Feng Sheng Hu;
Scotti, Ivan;
Sebastiani, Federico;
Soto, Álvaro;
Petit, Rémy J.

Publication type:

Article

SELECTIVE TRADE-OFFS AND SEX-CHROMOSOME EVOLUTION IN SILENE LATIFOLIA.

Published in:

Evolution, 2006, v. 60, n. 9, p. 1793, doi. 10.1554/05-698.1

By:

Scotti, Ivan;
Delph, Lynda F.

Publication type:

Article

Neutral and Adaptive Drivers of Microgeographic Genetic Divergence within Continuous Populations: The Case of the Neotropical Tree Eperua falcata (Aubl.).

Published in:

PLoS ONE, 2015, v. 10, n. 3, p. 1, doi. 10.1371/journal.pone.0121394

By:

Brousseau, Louise;
Foll, Matthieu;
Scotti-Saintagne, Caroline;
Scotti, Ivan

Publication type:

Article

Generalization of the Partitioning of Shannon Diversity.

Published in:

PLoS ONE, 2014, v. 9, n. 3, p. 1, doi. 10.1371/journal.pone.0090289

By:

Marcon, Eric;
Scotti, Ivan;
Hérault, Bruno;
Rossi, Vivien;
Lang, Gabriel

Publication type:

Article

Always Look on Both Sides: Phylogenetic Information Conveyed by Simple Sequence Repeat Allele Sequences.

Published in:

PLoS ONE, 2012, v. 7, n. 7, p. 1, doi. 10.1371/journal.pone.0040699

By:

Barthe, Stéphanie;
Gugerli, Felix;
Barkley, Noelle A.;
Maggia, Laurent;
Cardi, Céline;
Scotti, Ivan

Publication type:

Article

A Chromosome-Level Genome Assembly of the European Beech (Fagus sylvatica) Reveals Anomalies for Organelle DNA Integration, Repeat Content and Distribution of SNPs.

Published in:

Frontiers in Genetics, 2022, v. 13, p. 1, doi. 10.3389/fgene.2021.691058

By:

Mishra, Bagdevi;
Ulaszewski, Bartosz;
Meger, Joanna;
Aury, Jean-Marc;
Bodénès, Catherine;
Lesur-Kupin, Isabelle;
Pfenninger, Markus;
Da Silva, Corinne;
Gupta, Deepak K;
Guichoux, Erwan;
Heer, Katrin;
Lalanne, Céline;
Labadie, Karine;
Opgenoorth, Lars;
Ploch, Sebastian;
Le Provost, Grégoire;
Salse, Jérôme;
Scotti, Ivan;
Wötzel, Stefan;
Plomion, Christophe

Publication type:

Article

Fire frequency, as well as stress response and developmental gene control serotiny level variation in a widespread pioneer Mediterranean conifer, Pinus halepensis.

Published in:

Ecology & Evolution (20457758), 2023, v. 13, n. 3, p. 1, doi. 10.1002/ece3.9919

By:

Romero, Bastien;
Scotti, Ivan;
Fady, Bruno;
Ganteaume, Anne

Publication type:

Article

Signature of mid‐Pleistocene lineages in the European silver fir (Abies alba Mill.) at its geographic distribution margin.

Published in:

Ecology & Evolution (20457758), 2021, v. 11, n. 16, p. 10984, doi. 10.1002/ece3.7886

By:

Scotti‐Saintagne, Caroline;
Boivin, Thomas;
Suez, Marie;
Musch, Brigitte;
Scotti, Ivan;
Fady, Bruno

Publication type:

Article

Microgeographic local adaptation and ecotype distributions: The role of selective processes on early life‐history traits in sympatric, ecologically divergent Symphonia populations.

Published in:

Ecology & Evolution (20457758), 2020, v. 10, n. 19, p. 10735, doi. 10.1002/ece3.6731

By:

Tysklind, Niklas;
Etienne, Marie‐Pierre;
Scotti‐Saintagne, Caroline;
Tinaut, Alexandra;
Casalis, Maxime;
Troispoux, Valerie;
Cazal, Saint‐Omer;
Brousseau, Louise;
Ferry, Bruno;
Scotti, Ivan

Publication type:

Article

Discrepancies between genetic and ecological divergence patterns suggest a complex biogeographic history in a Neotropical genus.

Published in:

Ecology & Evolution (20457758), 2020, v. 10, n. 11, p. 4726, doi. 10.1002/ece3.6227

By:

Binelli, Giorgio;
Montaigne, William;
Sabatier, Daniel;
Scotti‐Saintagne, Caroline;
Scotti, Ivan

Publication type:

Article

Chloroplast DNA variation in a hyperdiverse tropical tree community.

Published in:

Ecology & Evolution (20457758), 2019, v. 9, n. 8, p. 4897, doi. 10.1002/ece3.5096

By:

Caron, Henri;
Molino, Jean‐François;
Sabatier, Daniel;
Léger, Patrick;
Chaumeil, Philippe;
Scotti‐Saintagne, Caroline;
Frigério, Jean‐Marc;
Scotti, Ivan;
Franc, Alain;
Petit, Rémy J.

Publication type:

Article

Blind population genetics survey of tropical rainforest trees.

Published in:

Molecular Ecology, 2006, v. 15, n. 12, p. 3505, doi. 10.1111/j.1365-294X.2006.03040.x

By:

Duminil, Jérôme;
Caron, Henri;
Scotti, Ivan;
Cazal, Saint-Omer;
Petit, Rémy J.

Publication type:

Article

Adaptive potential in forest tree populations: what is it, and how can we measure it?

Published in:

Annals of Forest Science (EDP Sciences), 2010, v. 67, n. 8, p. 801, doi. 10.1051/forest/2010053

By:

Scotti, Ivan

Publication type:

Article