Works by Scheremetjew, Maxim

Results: 10

InterProScan 5: genome-scale protein function classification.

Published in:

Bioinformatics, 2014, v. 30, n. 9, p. 1236, doi. 10.1093/bioinformatics/btu031

By:

Jones, Philip;
Binns, David;
Chang, Hsin-Yu;
Fraser, Matthew;
Li, Weizhong;
McAnulla, Craig;
McWilliam, Hamish;
Maslen, John;
Mitchell, Alex;
Nuka, Gift;
Pesseat, Sebastien;
Quinn, Antony F.;
Sangrador-Vegas, Amaia;
Scheremetjew, Maxim;
Yong, Siew-Yit;
Lopez, Rodrigo;
Hunter, Sarah

Publication type:

Article

Metagenomic analysis: the challenge of the data bonanza.

Published in:

Briefings in Bioinformatics, 2012, v. 13, n. 6, p. 743, doi. 10.1093/bib/bbs020

By:

Hunter, Chris I.;
Mitchell, Alex;
Jones, Philip;
McAnulla, Craig;
Pesseat, Sebastien;
Scheremetjew, Maxim;
Hunter, Sarah

Publication type:

Article

PICNIC accurately predicts condensate-forming proteins regardless of their structural disorder across organisms.

Published in:

Nature Communications, 2024, v. 15, n. 1, p. 1, doi. 10.1038/s41467-024-55089-x

By:

Hadarovich, Anna;
Singh, Hari Raj;
Ghosh, Soumyadeep;
Scheremetjew, Maxim;
Rostam, Nadia;
Hyman, Anthony A.;
Toth-Petroczy, Agnes

Publication type:

Article

MGnify: the microbiome analysis resource in 2020.

Published in:

Nucleic Acids Research, 2020, v. 48, n. D1, p. D570, doi. 10.1093/nar/gkz1035

By:

Mitchell, Alex L;
Almeida, Alexandre;
Beracochea, Martin;
Boland, Miguel;
Burgin, Josephine;
Cochrane, Guy;
Crusoe, Michael R;
Kale, Varsha;
Potter, Simon C;
Richardson, Lorna J;
Sakharova, Ekaterina;
Scheremetjew, Maxim;
Korobeynikov, Anton;
Shlemov, Alex;
Kunyavskaya, Olga;
Lapidus, Alla;
Finn, Robert D

Publication type:

Article

EBI Metagenomics in 2017: enriching the analysis of microbial communities, from sequence reads to assemblies.

Published in:

Nucleic Acids Research, 2018, v. 46, n. D1, p. D726, doi. 10.1093/nar/gkx967

By:

Mitchell, Alex L;
Scheremetjew, Maxim;
Denise, Hubert;
Potter, Simon;
Tarkowska, Aleksandra;
Qureshi, Matloob;
Salazar, Gustavo A;
Pesseat, Sebastien;
Boland, Miguel A;
Hunter, Fiona M I

Publication type:

Article

deTELpy: Python package for high-throughput detection of amino acid substitutions in mass spectrometry datasets.

Published in:

Bioinformatics, 2024, v. 40, n. 7, p. 1, doi. 10.1093/bioinformatics/btae424

By:

Landerer, Cedric;
Scheremetjew, Maxim;
Moon, HongKee;
Hersemann, Lena;
Toth-Petroczy, Agnes

Publication type:

Article

SHARK‐capture identifies functional motifs in intrinsically disordered protein regions.

Published in:

Protein Science: A Publication of the Protein Society, 2025, v. 34, n. 4, p. 1, doi. 10.1002/pro.70091

By:

Chow, Chi Fung Willis;
Lenz, Swantje;
Scheremetjew, Maxim;
Ghosh, Soumyadeep;
Richter, Doris;
Jegers, Ceciel;
von Appen, Alexander;
Alberti, Simon;
Toth‐Petroczy, Agnes

Publication type:

Article

EBI metagenomics in 2016 - an expanding and evolving resource for the analysis and archiving of metagenomic data.

Published in:

Nucleic Acids Research, 2016, v. 44, p. D595, doi. 10.1093/nar/gkv1195

By:

Mitchell, Alex;
Bucchini, Francois;
Cochrane, Guy;
Denise, Hubert;
Hoopen, Petra ten;
Fraser, Matthew;
Pesseat, Sebastien;
Potter, Simon;
Scheremetjew, Maxim;
Sterk, Peter;
Finn, Robert D.

Publication type:

Article

The InterPro protein families database: the classification resource after 15 years.

Published in:

Nucleic Acids Research, 2015, v. 43, n. D1, p. D213, doi. 10.1093/nar/gku1243

By:

Mitchell, Alex;
Chang, Hsin-Yu;
Daugherty, Louise;
Fraser, Matthew;
Hunter, Sarah;
Lopez, Rodrigo;
McAnulla, Craig;
McMenamin, Conor;
Nuka, Gift;
Pesseat, Sebastien;
Sangrador-Vegas, Amaia;
Scheremetjew, Maxim;
Rato, Claudia;
Yong, Siew-Yit;
Bateman, Alex;
Punta, Marco;
Attwood, Teresa K.;
Sigrist, Christian J.A.;
Redaschi, Nicole;
Rivoire, Catherine

Publication type:

Article

EBI metagenomics—a new resource for the analysis and archiving of metagenomic data.

Published in:

Nucleic Acids Research, 2014, v. 42, n. D1, p. D600, doi. 10.1093/nar/gkt961

By:

Hunter, Sarah;
Corbett, Matthew;
Denise, Hubert;
Fraser, Matthew;
Gonzalez-Beltran, Alejandra;
Hunter, Christopher;
Jones, Philip;
Leinonen, Rasko;
McAnulla, Craig;
Maguire, Eamonn;
Maslen, John;
Mitchell, Alex;
Nuka, Gift;
Oisel, Arnaud;
Pesseat, Sebastien;
Radhakrishnan, Rajesh;
Rocca-Serra, Philippe;
Scheremetjew, Maxim;
Sterk, Peter;
Vaughan, Daniel

Publication type:

Article