Works matching AU Schatz, Michael

Results: 162

GenomeScope: fast reference-free genome profiling from short reads.

Published in:

Bioinformatics, 2017, v. 33, n. 14, p. 2202, doi. 10.1093/bioinformatics/btx153

By:

Vurture, Gregory W.;
Sedlazeck, Fritz J.;
Nattestad, Maria;
Underwood, Charles J.;
Han Fang;
Gurtowski, James;
Schatz, Michael C.

Publication type:

Article

Assemblytics: a web analytics tool for the detection of variants from an assembly.

Published in:

Bioinformatics, 2016, v. 32, n. 19, p. 3021, doi. 10.1093/bioinformatics/btw369

By:

Nattestad, Maria;
Schatz, Michael C.

Publication type:

Article

SplitMEM: a graphical algorithm for pan-genome analysis with suffix skips.

Published in:

Bioinformatics, 2014, v. 30, n. 24, p. 3476, doi. 10.1093/bioinformatics/btu756

By:

Marcus, Shoshana;
Lee, Hayan;
Schatz, Michael C.

Publication type:

Article

Genomic dark matter: the reliability of short read mapping illustrated by the genome mappability score.

Published in:

Bioinformatics, 2012, v. 28, n. 16, p. 2097, doi. 10.1093/bioinformatics/bts330

By:

Lee, Hayan;
Schatz, Michael C.

Publication type:

Article

An electrochemical cell for in operando 13C nuclear magnetic resonance investigations of carbon dioxide/carbonate processes in aqueous solution.

Published in:

Magnetic Resonance, 2021, v. 2, n. 1, p. 265, doi. 10.5194/mr-2-265-2021

By:

Jovanovic, Sven;
Schleker, P. Philipp M.;
Streun, Matthias;
Merz, Steffen;
Jakes, Peter;
Schatz, Michael;
Eichel, Rüdiger-A.;
Granwehr, Josef

Publication type:

Article

Establishing Physalis as a Solanaceae model system enables genetic reevaluation of the inflated calyx syndrome.

Published in:

Plant Cell, 2023, v. 35, n. 1, p. 351, doi. 10.1093/plcell/koac305

By:

He, Jia;
Alonge, Michael;
Ramakrishnan, Srividya;
Benoit, Matthias;
Soyk, Sebastian;
Reem, Nathan T;
Hendelman, Anat;
Van Eck, Joyce;
Schatz, Michael C;
Lippman, Zachary B

Publication type:

Article

Developmental follow-up in 15-month-old infants of asthmatic vs. control mothers.

Published in:

Pediatric Allergy & Immunology, 2001, v. 12, n. 3, p. 149, doi. 10.1034/j.1399-3038.2001.012003149.x

By:

Schatz, Michael;
Harden, Kathleen;
Kagnoff, Marcia;
Zeiger, Robert S.;
Chilingar, Linda

Publication type:

Article

Natural Genetic Diversity in Tomato Flavor Genes.

Published in:

Frontiers in Plant Science, 2021, v. 12, p. 1, doi. 10.3389/fpls.2021.642828

By:

Pereira, Lara;
Sapkota, Manoj;
Alonge, Michael;
Zheng, Yi;
Zhang, Youjun;
Razifard, Hamid;
Taitano, Nathan K.;
Schatz, Michael C.;
Fernie, Alisdair R.;
Wang, Ying;
Fei, Zhangjun;
Caicedo, Ana L.;
Tieman, Denise M.;
van der Knaap, Esther

Publication type:

Article

Generalizability of an Automatic Explanation Method for Machine Learning Prediction Results on Asthma-Related Hospital Visits in Patients With Asthma: Quantitative Analysis.

Published in:

Journal of Medical Internet Research, 2021, v. 23, n. 4, p. N.PAG, doi. 10.2196/24153

By:

Luo, Gang;
Nau, Claudia L;
Crawford, William W;
Schatz, Michael;
Zeiger, Robert S;
Koebnick, Corinna

Publication type:

Article

Generalizability of an Automatic Explanation Method for Machine Learning Prediction Results on Asthma-Related Hospital Visits in Patients With Asthma: Quantitative Analysis.

Published in:

2021

By:

Luo, Gang;
Nau, Claudia L;
Crawford, William W;
Schatz, Michael;
Zeiger, Robert S;
Koebnick, Corinna

Publication type:

journal article

In memory of James Taylor: the birth of Galaxy.

Published in:

2020

By:

Nekrutenko, Anton;
Schatz, Michael C.

Publication type:

Editorial

Prevalence and Characteristics of Chronic Cough in Adults Identified by Administrative Data.

Published in:

Permanente Journal, 2020, v. 24, n. 5, p. 100, doi. 10.7812/TPP/20.022

By:

Zeiger, Robert S.;
Fagen Xie;
Schatz, Michael;
Hong, Benjamin D.;
Weaver, Jessica P.;
Bali, Vishal;
Schelfhout, Jonathan;
Wansu Chen

Publication type:

Article

Genomic survey of the ectoparasitic mite Varroa destructor, a major pest of the honey bee Apis mellifera.

Published in:

BMC Genomics, 2010, v. 11, n. 1, p. 1, doi. 10.1186/1471-2164-11-602

By:

Cornman, R Scott;
Schatz, Michael C;
Johnston, J Spencer;
Chen, Yan-Ping;
Pettis, Jeff;
Hunt, Greg;
Bourgeois, Lanie;
Elsik, Chris;
Anderson, Denis;
Grozinger, Christina M;
Evans, Jay D

Publication type:

Article

Genomic survey of the ectoparasitic mite Varroa destructor, a major pest of the honey bee Apis mellifera.

Published in:

BMC Genomics, 2010, v. 11, p. 602, doi. 10.1186/1471-2164-11-602

By:

Cornman, R. Scott;
Schatz, Michael C.;
Johnston, J. Spencer;
Yan-Ping Chen;
Pettis, Jeff;
Hunt, Greg;
Bourgeois, Lanie;
Elsik, Chris;
Anderson, Denis;
Grozinger, Christina M.;
Evans, Jay D.

Publication type:

Article

Genome sequence and rapid evolution of the rice pathogen Xanthomonas oryzae pv. oryzae PXO99A.

Published in:

BMC Genomics, 2008, v. 9, p. 1, doi. 10.1186/1471-2164-9-204

By:

Salzberg, Steven L.;
Sommer, Daniel D.;
Schatz, Michael C.;
Phillippy, Adam M.;
Rabinowicz, Pablo D.;
Tsuge, Seiji;
Furutani, Ayako;
Ochiai, Hirokazu;
Delcher, Arthur L.;
Kelley, David;
Madupu, Ramana;
Puiu, Daniela;
Radune, Diana;
Shumway, Martin;
Trapnell, Cole;
Aparna, Gudlur;
Jha, Gopaljee;
Pandey, Alok;
Patil, Prabhu B.;
Ishihara, Hiromichi

Publication type:

Article

Fast and accurate genome-wide predictions and structural modeling of protein–protein interactions using Galaxy.

Published in:

BMC Bioinformatics, 2023, v. 24, n. 1, p. 1, doi. 10.1186/s12859-023-05389-8

By:

Guerler, Aysam;
Baker, Dannon;
van den Beek, Marius;
Gruening, Bjoern;
Bouvier, Dave;
Coraor, Nate;
Shank, Stephen D.;
Zehr, Jordan D.;
Schatz, Michael C.;
Nekrutenko, Anton

Publication type:

Article

Genomic Analyses of the Microsporidian Nosema ceranae, an Emergent Pathogen of Honey Bees.

Published in:

PLoS Pathogens, 2009, v. 5, n. 6, p. 1, doi. 10.1371/journal.ppat.1000466

By:

Cornman, R. Scott;
Yan Ping Chen;
Schatz, Michael C.;
Street, Craig;
Yan Zhao;
Desany, Brian;
Egholm, Michael;
Hutchison, Stephen;
Pettis, Jeffery S.;
Lipkin, W. Ian;
Evans, Jay D.

Publication type:

Article

Changes in asthma control, work productivity, and impairment with omalizumab: 5-year EXCELS study results.

Published in:

Allergy & Asthma Proceedings, 2015, v. 36, n. 4, p. 283, doi. 10.2500/aap.2015.36.3849

By:

Zazzali, James L.;
Raimundo, Karina P.;
Trzaskoma, Benjamin;
Rosén, Karin E.;
Schatz, Michael

Publication type:

Article

Antibiotic pressure on the acquisition and loss of antibiotic resistance genes in Klebsiella pneumoniae.

Published in:

2018

By:

Simner, Patricia J.;
Antar, Annukka A. R.;
Hao, Stephanie;
Gurtowski, James;
Tamma, Pranita D.;
Rock, Clare;
Opene, Belita N. A.;
Tekle, Tsigereda;
Carroll, Karen C.;
Schatz, Michael C.;
Timp, Winston

Publication type:

journal article

Local adaptation and archaic introgression shape global diversity at human structural variant loci.

Published in:

eLife, 2021, p. 1, doi. 10.7554/eLife.67615

By:

Yan, Stephanie M.;
Sherman, Rachel M.;
Taylor, Dylan J.;
Nair, Divya R.;
Bortvin, Andrew N.;
Schatz, Michael C.;
McCoy, Rajiv C.

Publication type:

Article

Quantifying local pH changes in carbonate electrolyte during copper-catalysed CO2 electroreduction using in operando13C NMR.

Published in:

Scientific Reports, 2022, v. 12, n. 1, p. 1, doi. 10.1038/s41598-022-12264-8

By:

Schatz, Michael;
Jovanovic, Sven;
Eichel, Rüdiger-A.;
Granwehr, Josef

Publication type:

Article

The Relationship of Maternal Personality Characteristics to Birth Outcomes and Infant Development.

Published in:

Birth: Issues in Perinatal Care, 2000, v. 27, n. 1, p. 25, doi. 10.1046/j.1523-536X.2000.00025.x

By:

Schatz, David;
Harder, David;
Schatz, Michael;
Harden, Kathleen;
Chilingar, Linda;
Fox, David;
Hoffman, Clement

Publication type:

Article

Characterization of large-scale genomic differences in the first complete human genome.

Published in:

Genome Biology, 2023, v. 24, n. 1, p. 1, doi. 10.1186/s13059-023-02995-w

By:

Yang, Xiangyu;
Wang, Xuankai;
Zou, Yawen;
Zhang, Shilong;
Xia, Manying;
Fu, Lianting;
Vollger, Mitchell R.;
Chen, Nae-Chyun;
Taylor, Dylan J.;
Harvey, William T.;
Logsdon, Glennis A.;
Meng, Dan;
Shi, Junfeng;
McCoy, Rajiv C.;
Schatz, Michael C.;
Li, Weidong;
Eichler, Evan E.;
Lu, Qing;
Mao, Yafei

Publication type:

Article

Automated assembly scaffolding using RagTag elevates a new tomato system for high-throughput genome editing.

Published in:

Genome Biology, 2022, v. 23, n. 1, p. 1, doi. 10.1186/s13059-022-02823-7

By:

Alonge, Michael;
Lebeigle, Ludivine;
Kirsche, Melanie;
Jenike, Katie;
Ou, Shujun;
Aganezov, Sergey;
Wang, Xingang;
Lippman, Zachary B.;
Schatz, Michael C.;
Soyk, Sebastian

Publication type:

Article

Minos: variant adjudication and joint genotyping of cohorts of bacterial genomes.

Published in:

Genome Biology, 2022, v. 23, n. 1, p. 1, doi. 10.1186/s13059-022-02714-x

By:

Hunt, Martin;
Letcher, Brice;
Malone, Kerri M.;
Nguyen, Giang;
Hall, Michael B.;
Colquhoun, Rachel M.;
Lima, Leandro;
Schatz, Michael C.;
Ramakrishnan, Srividya;
Iqbal, Zamin

Publication type:

Article

Cultivation and Complete Genome Sequencing of Gloeobacter kilaueensis sp. nov., from a Lava Cave in Kīlauea Caldera, Hawai'i.

Published in:

PLoS ONE, 2013, v. 8, n. 10, p. 1, doi. 10.1371/journal.pone.0076376

By:

Saw, Jimmy H. W.;
Schatz, Michael;
Brown, Mark V.;
Kunkel, Dennis D.;
Foster, Jamie S.;
Shick, Harry;
Christensen, Stephanie;
Hou, Shaobin;
Wan, Xuehua;
Donachie, Stuart P.

Publication type:

Article

Controller therapy in Asians and whites with persistent Asthma.

Published in:

Asian Pacific Journal of Allergy & Immunology, 2019, v. 37, n. 2, p. 73

By:

Chen, Wansu;
Schatz, Michael;
Zhi Liang;
Qiaowu Li;
Sadikova, Ekaterina;
Zilu Zhang;
Bagga, Shalini;
Zeiger, Robert S.

Publication type:

Article

A plasmid locus associated with Klebsiella clinical infections encodes a microbiome-dependent gut fitness factor.

Published in:

PLoS Pathogens, 2021, v. 17, n. 4, p. 1, doi. 10.1371/journal.ppat.1009537

By:

Vornhagen, Jay;
Bassis, Christine M.;
Ramakrishnan, Srividya;
Hein, Robert;
Mason, Sophia;
Bergman, Yehudit;
Sunshine, Nicole;
Fan, Yunfan;
Holmes, Caitlyn L.;
Timp, Winston;
Schatz, Michael C.;
Young, Vincent B.;
Simner, Patricia J.;
Bachman, Michael A.

Publication type:

Article

Multicentre genetic diversity study of carbapenem-resistant Enterobacterales: predominance of untypeable pUVA-like blaKPC bearing plasmids.

Published in:

JAC-Antimicrobial Resistance, 2023, v. 5, n. 3, p. 1, doi. 10.1093/jacamr/dlad061

By:

Simner, Patricia J.;
Bergman, Yehudit;
Fan, Yunfan;
Jacobs, Emily B.;
Ramakrishnan, Srividya;
Lu, Jennifer;
Lewis, Shawna;
Hanlon, Ann;
Tamma, Pranita D.;
Schatz, Michael C.;
Timp, Winston;
Carroll, Karen C.

Publication type:

Article

Correcting myths and misconceptions about allergies to pets

Published in:

Anthrozoös, 1990, v. 3, n. 4, p. 230, doi. 10.2752/089279390787057414

By:

Schatz, Michael;
Schatz, Carole

Publication type:

Article

Pigeon breeder's disease. II. Pigeon antigen induced proliferation of lymphocytes from symptomatic and asymptomatic subjects.

Published in:

Clinical & Experimental Allergy, 1976, v. 6, n. 1, p. 7, doi. 10.1111/j.1365-2222.1976.tb01407.x

By:

SCHATZ, MICHAEL;
PATTERSON, ROY;
FINK, JORDAN;
MOORE, VERNON

Publication type:

Article

Munchausen's stridor: non-organic laryngeal obstruction.

Published in:

Clinical & Experimental Allergy, 1974, v. 4, n. 3, p. 307, doi. 10.1111/j.1365-2222.1974.tb01390.x

By:

PATTERSON, ROY;
SCHATZ, MICHAEL;
HORTON, MARK

Publication type:

Article

Genome‐wide patterns of transposon proliferation in an evolutionary young hybrid fish.

Published in:

Molecular Ecology, 2019, v. 28, n. 6, p. 1491, doi. 10.1111/mec.14969

By:

Dennenmoser, Stefan;
Sedlazeck, Fritz J.;
Schatz, Michael C.;
Altmüller, Janine;
Zytnicki, Matthias;
Nolte, Arne W.

Publication type:

Article

Multimodal Imaging and Macular Hyalocyte Count in a Patient with Acute Macular Neuroretinopathy.

Published in:

2022

By:

Schatz, Michael J.;
Otero-Marquez, Oscar;
Rosen, Richard B.;
Parikh, Deep

Publication type:

Case Study

Multimodal Imaging of Waldenstrom Macroglobulinemia-Associated Hyperviscosity-Related Retinopathy Treated with Plasmapheresis.

Published in:

2021

By:

Schatz, Michael J.;
Wilkins, Carl S.;
Otero-Marquez, Oscar;
Chui, Toco Y. P.;
Rosen, Richard B.;
Gupta, Meenakashi

Publication type:

Case Study

Pharmacoepidemiological Study of Long-Acting β-agonist/Inhaled Corticosteroid Therapy and Asthma Mortality: Clinical Implications.

Published in:

Clinical Drug Investigation, 2016, v. 36, n. 12, p. 993, doi. 10.1007/s40261-016-0448-1

By:

Camargo, Carlos;
Davis, Kourtney;
Andrews, Elizabeth;
Stempel, David;
Schatz, Michael

Publication type:

Article

Effect of Prenatal Supplementation With Vitamin D on Asthma or Recurrent Wheezing in Offspring by Age 3 Years: The VDAART Randomized Clinical Trial.

Published in:

2016

By:

Litonjua, Augusto A.;
Carey, Vincent J.;
Laranjo, Nancy;
Harshfield, Benjamin J.;
McElrath, Thomas F.;
O'Connor, George T.;
Sandel, Megan;
Iverson Jr., Ronald E.;
Lee-Paritz, Aviva;
Strunk, Robert C.;
Bacharier, Leonard B.;
Macones, George A.;
Zeiger, Robert S.;
Schatz, Michael;
Hollis, Bruce W.;
Hornsby, Eve;
Hawrylowicz, Catherine;
Ann Chen Wu;
Weiss, Scott T.;
Iverson, Ronald E Jr

Publication type:

journal article

A comparison of the psychometric properties of the Mini-Rhinitis Quality of Life Questionnaire and the Rhinitis Control Assessment Test.

Published in:

American Journal of Rhinology & Allergy, 2012, v. 26, n. 2, p. 127, doi. 10.2500/ajra.2012.26.3744

By:

Schatz, Michael;
Zeiger, Robert S.;
Chen, Wansu;
Yang, Su-Jau;
Stanford, Richard H.;
Garris, Cindy P.

Publication type:

Article

Patterns of prednisone use during pregnancy in women with rheumatoid arthritis: Daily and cumulative dose.

Published in:

Pharmacoepidemiology & Drug Safety, 2018, v. 27, n. 4, p. 430, doi. 10.1002/pds.4410

By:

Palmsten, Kristin;
Rolland, Matthieu;
Hebert, Mary F.;
Clowse, Megan E. B.;
Schatz, Michael;
Xu, Ronghui;
Chambers, Christina D.

Publication type:

Article

A posteriori correction of camera characteristics from large image data sets.

Published in:

Scientific Reports, 2015, p. 10317, doi. 10.1038/srep10317

By:

Afanasyev, Pavel;
Ravelli, Raimond B. G.;
Matadeen, Rishi;
De Carlo, Sacha;
van Duinen, Gijs;
Alewijnse, Bart;
Peters, Peter J.;
Abrahams, Jan-Pieter;
Portugal, Rodrigo V.;
Schatz, Michael;
van Heel, Marin

Publication type:

Article

Cloud computing and the DNA data race.

Published in:

2010

By:

Schatz, Michael C.;
Langmead, Ben;
Salzberg, Steven L.

Publication type:

Opinion

Big Data: Astronomical or Genomical?

Published in:

PLoS Biology, 2015, v. 13, n. 7, p. 1, doi. 10.1371/journal.pbio.1002195

By:

Stephens, Zachary D.;
Lee, Skylar Y.;
Faghri, Faraz;
Campbell, Roy H.;
Zhai, Chengxiang;
Efron, Miles J.;
Iyer, Ravishankar;
Schatz, Michael C.;
Sinha, Saurabh;
Robinson, Gene E.

Publication type:

Article

Major Structural Differences and Novel Potential Virulence Mechanisms from the Genomes of Multiple Campylobacter Species.

Published in:

PLoS Biology, 2005, v. 3, n. 1, p. 1, doi. 10.1371/journal.pbio.0030015

By:

Fouts, Derrick E;
Mongodin, Emmanuel F;
Mandrell, Robert E;
Miller, William G;
Rasko, David A;
Ravel, Jacques;
Brinkac, Lauren M;
DeBoy, Robert T;
Parker, Craig T;
Daugherty, Sean C;
Dodson, Robert J;
Durkin, A. Scott;
Madupu, Ramana;
Sullivan, Steven A;
Shetty, Jyoti U;
Ayodeji, Mobolanle A;
Shvartsbeyn, Alla;
Schatz, Michael C;
Badger, Jonathan H;
Fraser, Claire M

Publication type:

Article

Major Structural Differences and Novel Potential Virulence Mechanisms from the Genomes of Multiple Campylobacter Species.

Published in:

PLoS Biology, 2005, v. 3, n. 1, p. 72, doi. 10.1371/journal.pbio.0030015

By:

Foutsi, Derrick E.;
Mongodin, Emmanuel F.;
Mandrell, Robert E.;
Miller, William G.;
Rasko, David A.;
Ravel, Jacques;
Brinkac, Lauren M.;
Deboy, Robert T.;
Parker, Craig T.;
Daugherty, Sean C.;
Dodson, Robert J.;
Durkin, A. Scott;
Ramana Madupu;
Sullivan, Steven A.;
Shetty, Jyoti U.;
Ayodeji, Mobolanle A.;
Shvartsbeyn, Alla;
Schatz, Michael C.;
Badger, Jonathan H.;
Fraser, Claire M.

Publication type:

Article

Immunization surveillance systems for pregnant women.

Published in:

Pharmacoepidemiology & Drug Safety, 2015, v. 24, n. 6, p. 669, doi. 10.1002/pds.3784

By:

Mitchell, Allen A.;
Louik, Carol;
Chambers, Christina;
Jones, Kenneth L.;
Schatz, Michael

Publication type:

Article

Palaeozoic geography of the Alpine realm, new palaeomagnetic data from the Northern Greywacke Zone, Eastern Alps.

Published in:

International Journal of Earth Sciences, 2002, v. 91, n. 6, p. 979, doi. 10.1007/s00531-002-0289-4

By:

Schätz, Michael;
Tait, Jennifer;
Bachtadse, Valerian;
Heinisch, Helmut;
Soffel, Heinrich

Publication type:

Article

Generating Software Test Data by Evolution.

Published in:

IEEE Transactions on Software Engineering, 2001, v. 27, n. 12, p. 1085, doi. 10.1109/32.988709

By:

Michael, Christoph C.;
McGraw, Gary;
Schatz, Michael A.

Publication type:

Article

Validation of the asthma impact survey, a brief asthma-specific quality of life tool.

Published in:

2007

By:

Schatz, Michael;
Mosen, David;
Kosinski, Mark;
Vollmer, William M.;
O’Connor, Elizabeth;
Cook, E. Francis;
Zeiger, Robert S.;
O'Connor, Elizabeth

Publication type:

journal article

Hawkeye and AMOS: visualizing and assessing the quality of genome assemblies.

Published in:

Briefings in Bioinformatics, 2013, v. 14, n. 2, p. 213, doi. 10.1093/bib/bbr074

By:

Schatz, Michael C.;
Phillippy, Adam M.;
Sommer, Daniel D.;
Delcher, Arthur L.;
Puiu, Daniela;
Narzisi, Giuseppe;
Salzberg, Steven L.;
Pop, Mihai

Publication type:

Article

Control of Confounding and Reporting of Results in Causal Inference Studies. Guidance for Authors from Editors of Respiratory, Sleep, and Critical Care Journals.

Published in:

2019

By:

Lederer, David J;
Bell, Scott C;
Branson, Richard D;
Chalmers, James D;
Marshall, Rachel;
Maslove, David M;
Ost, David E;
Punjabi, Naresh M;
Schatz, Michael;
Smyth, Alan R;
Stewart, Paul W;
Suissa, Samy;
Adjei, Alex A;
Akdis, Cezmi A;
Azoulay, Élie;
Bakker, Jan;
Ballas, Zuhair K;
Bardin, Philip G;
Barreiro, Esther;
Bellomo, Rinaldo

Publication type:

journal article