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Determinants and dynamics of genome accessibility.
- Published in:
- 2011
- By:
- Publication type:
- journal article
Cancer lineage-specific regulation of YAP responsive elements revealed through large-scale functional epigenomic screens.
- Published in:
- Nature Communications, 2023, v. 14, n. 1, p. 1, doi. 10.1038/s41467-023-39527-w
- By:
- Publication type:
- Article
Non-genotoxic carcinogen exposure induces defined changes in the 5-hydroxymethylome.
- Published in:
- Genome Biology, 2012, v. 13, n. 10, p. 1, doi. 10.1186/gb-2012-13-10-R93
- By:
- Publication type:
- Article
Dynamic DNA methylation orchestrates cardiomyocyte development, maturation and disease.
- Published in:
- Nature Communications, 2014, v. 5, n. 10, p. 5288, doi. 10.1038/ncomms6288
- By:
- Publication type:
- Article
Gene regulation and priming by topoisomerase IIα in embryonic stem cells.
- Published in:
- Nature Communications, 2013, v. 4, n. 9, p. 2478, doi. 10.1038/ncomms3478
- By:
- Publication type:
- Article
DNA-binding factors shape the mouse methylome at distal regulatory regions.
- Published in:
- Nature, 2011, v. 480, n. 7378, p. 490, doi. 10.1038/nature10716
- By:
- Publication type:
- Article
Epigenomics: Methylation matters.
- Published in:
- Nature, 2009, v. 462, n. 7271, p. 296, doi. 10.1038/462296a
- By:
- Publication type:
- Article
Tracking the evolution of cancer methylomes.
- Published in:
- Nature Genetics, 2012, v. 44, n. 11, p. 1173, doi. 10.1038/ng.2451
- By:
- Publication type:
- Article
A chromatin-modifying function of JNK during stem cell differentiation.
- Published in:
- Nature Genetics, 2012, v. 44, n. 1, p. 94, doi. 10.1038/ng.1036
- By:
- Publication type:
- Article
Identification of genetic elements that autonomously determine DNA methylation states.
- Published in:
- Nature Genetics, 2011, v. 43, n. 11, p. 1091, doi. 10.1038/ng.946
- By:
- Publication type:
- Article
Targets and dynamics of promoter DNA methylation during early mouse development.
- Published in:
- Nature Genetics, 2010, v. 42, n. 12, p. 1093, doi. 10.1038/ng.708
- By:
- Publication type:
- Article
Distribution, silencing potential and evolutionary impact of promoter DNA methylation in the human genome.
- Published in:
- Nature Genetics, 2007, v. 39, n. 4, p. 457, doi. 10.1038/ng1990
- By:
- Publication type:
- Article
Enhancing genome annotation with chromatin.
- Published in:
- Nature Genetics, 2007, v. 39, n. 3, p. 284, doi. 10.1038/ng0307-284
- By:
- Publication type:
- Article
Defining epigenetic states through chromatin and RNA.
- Published in:
- 2005
- By:
- Publication type:
- Report
Chromosome-wide and promoter-specific analyses identify sites of differential DNA methylation in normal and transformed human cells.
- Published in:
- Nature Genetics, 2005, v. 37, n. 8, p. 853, doi. 10.1038/ng1598
- By:
- Publication type:
- Article
YAP1 Exerts Its Transcriptional Control via TEAD-Mediated Activation of Enhancers.
- Published in:
- PLoS Genetics, 2015, v. 11, n. 8, p. 1, doi. 10.1371/journal.pgen.1005465
- By:
- Publication type:
- Article
DNA Sequence Explains Seemingly Disordered Methylation Levels in Partially Methylated Domains of Mammalian Genomes.
- Published in:
- PLoS Genetics, 2014, v. 10, n. 2, p. 1, doi. 10.1371/journal.pgen.1004143
- By:
- Publication type:
- Article
Transcription Factor Occupancy Can Mediate Active Turnover of DNA Methylation at Regulatory Regions.
- Published in:
- PLoS Genetics, 2013, v. 9, n. 12, p. 1, doi. 10.1371/journal.pgen.1003994
- By:
- Publication type:
- Article
Genomic Prevalence of Heterochromatic H3K9me2 and Transcription Do Not Discriminate Pluripotent from Terminally Differentiated Cells.
- Published in:
- PLoS Genetics, 2011, v. 7, n. 6, p. 1, doi. 10.1371/journal.pgen.1002090
- By:
- Publication type:
- Article
Molecular determinants of nucleosome retention at CpG-rich sequences in mouse spermatozoa.
- Published in:
- Nature Structural & Molecular Biology, 2013, v. 20, n. 10, p. 1236, doi. 10.1038/nsmb1013-1236b
- By:
- Publication type:
- Article
Molecular determinants of nucleosome retention at CpG-rich sequences in mouse spermatozoa.
- Published in:
- Nature Structural & Molecular Biology, 2013, v. 20, n. 7, p. 868, doi. 10.1038/nsmb.2599
- By:
- Publication type:
- Article
Accessibility of the Drosophila genome discriminates PcG repression, H4K16 acetylation and replication timing.
- Published in:
- Nature Structural & Molecular Biology, 2010, v. 17, n. 7, p. 894, doi. 10.1038/nsmb.1825
- By:
- Publication type:
- Article
Repressive and active histone methylation mark distinct promoters in human and mouse spermatozoa.
- Published in:
- Nature Structural & Molecular Biology, 2010, v. 17, n. 6, p. 679, doi. 10.1038/nsmb.1821
- By:
- Publication type:
- Article
H3K64 trimethylation marks heterochromatin and is dynamically remodeled during developmental reprogramming.
- Published in:
- Nature Structural & Molecular Biology, 2009, v. 16, n. 7, p. 777, doi. 10.1038/nsmb.1629
- By:
- Publication type:
- Article
Cell cycle-resolved chromatin proteomics reveals the extent of mitotic preservation of the genomic regulatory landscape.
- Published in:
- Nature Communications, 2018, v. 9, n. 1, p. 1, doi. 10.1038/s41467-018-06007-5
- By:
- Publication type:
- Article
Tackling the epigenome: challenges and opportunities for collaboration.
- Published in:
- 2010
- By:
- Publication type:
- Opinion
monaLisa: an R/Bioconductor package for identifying regulatory motifs.
- Published in:
- Bioinformatics, 2022, v. 38, n. 9, p. 2624, doi. 10.1093/bioinformatics/btac102
- By:
- Publication type:
- Article
NUCLEAR COMPARTMENTALIZATION AND GENE ACTIVITY.
- Published in:
- Nature Reviews Molecular Cell Biology, 2000, v. 1, n. 2, p. 137, doi. 10.1038/35040083
- By:
- Publication type:
- Article
Protein Complex Interactor Analysis and Differential Activity of KDM3 Subfamily Members Towards H3K9 Methylation.
- Published in:
- PLoS ONE, 2013, v. 8, n. 4, p. 1, doi. 10.1371/journal.pone.0060549
- By:
- Publication type:
- Article
Phenobarbital Mediates an Epigenetic Switch at the Constitutive Androstane Receptor (CAR) Target Gene Cyp2b10 in the Liver of B6C3F1 Mice.
- Published in:
- PLoS ONE, 2011, v. 6, n. 3, p. 1, doi. 10.1371/journal.pone.0018216
- By:
- Publication type:
- Article
Genome-wide DNA replication profile for Drosophila melanogaster: a link between transcription and replication timing.
- Published in:
- Nature Genetics, 2002, v. 32, n. 3, p. 438, doi. 10.1038/ng1005
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- Publication type:
- Article
Global Reorganization of Replication Domains During Embryonic Stem Cell Differentiation.
- Published in:
- PLoS Biology, 2008, v. 6, n. 10, p. 2220, doi. 10.1371/journal.pbio.0060245
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- Publication type:
- Article
Genomic profiling of DNA methyltransferases reveals a role for DNMT3B in genic methylation.
- Published in:
- Nature, 2015, v. 520, n. 7546, p. 243, doi. 10.1038/nature14176
- By:
- Publication type:
- Article
Function and information content of DNA methylation.
- Published in:
- Nature, 2015, v. 517, n. 7534, p. 321, doi. 10.1038/nature14192
- By:
- Publication type:
- Article
DNA methylation in ES cells requires the lysine methyltransferase G9a but not its catalytic activity.
- Published in:
- EMBO Journal, 2008, v. 27, n. 20, p. 2691, doi. 10.1038/emboj.2008.193
- By:
- Publication type:
- Article
Localized H3K36 methylation states define histone H4K16 acetylation during transcriptional elongation in Drosophila.
- Published in:
- EMBO Journal, 2007, v. 26, n. 24, p. 4974, doi. 10.1038/sj.emboj.7601926
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- Publication type:
- Article
ESCI award lecture: regulation, function and biomarker potential of DNA methylation.
- Published in:
- European Journal of Clinical Investigation, 2015, v. 45, n. 3, p. 288, doi. 10.1111/eci.12403
- By:
- Publication type:
- Article
Cis-regulatory landscapes of four cell types of the retina.
- Published in:
- Nucleic Acids Research, 2017, v. 45, n. 20, p. 11607, doi. 10.1093/nar/gkx923
- By:
- Publication type:
- Article
Identification of active regulatory regions from DNA methylation data.
- Published in:
- Nucleic Acids Research, 2013, v. 41, n. 16, p. e155, doi. 10.1093/nar/gkt599
- By:
- Publication type:
- Article
Multidimensional pooled shRNA screens in human THP-1 cells identify candidate modulators of macrophage polarization.
- Published in:
- PLoS ONE, 2017, v. 12, n. 8, p. 1, doi. 10.1371/journal.pone.0183679
- By:
- Publication type:
- Article
genomation: a toolkit to summarize, annotate and visualize genomic intervals.
- Published in:
- Bioinformatics, 2015, v. 31, n. 7, p. 1127, doi. 10.1093/bioinformatics/btu775
- By:
- Publication type:
- Article
A genome-scale map of DNA methylation turnover identifies site-specific dependencies of DNMT and TET activity.
- Published in:
- Nature Communications, 2020, v. 11, n. 1, p. 1, doi. 10.1038/s41467-020-16354-x
- By:
- Publication type:
- Article
Loss of Ezh2 promotes a midbrain-to-forebrain identity switch by direct gene derepression and Wnt-dependent regulation.
- Published in:
- BMC Biology, 2015, v. 13, p. 1, doi. 10.1186/s12915-015-0210-9
- By:
- Publication type:
- Article
Binding of high mobility group A proteins to the mammalian genome occurs as a function of AT-content.
- Published in:
- PLoS Genetics, 2017, v. 13, n. 12, p. 1, doi. 10.1371/journal.pgen.1007102
- By:
- Publication type:
- Article
Twisting chromatin in stem cells.
- Published in:
- EMBO Journal, 2013, v. 32, n. 17, p. 2304, doi. 10.1038/emboj.2013.179
- By:
- Publication type:
- Article
Chromatin measurements reveal contributions of synthesis and decay to steady‐state mRNA levels.
- Published in:
- Molecular Systems Biology, 2012, v. 8, n. 1, p. 1, doi. 10.1038/msb.2012.23
- By:
- Publication type:
- Article