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Markov Chains with Measurement Error: Estimating the 'True' Course of a Marker of the Progression of Human Immunodeficiency Virus Disease.
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- Journal of the Royal Statistical Society: Series C (Applied Statistics), 1996, v. 45, n. 3, p. 275, doi. 10.2307/2986089
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- Article
Restoring the Duality between Principal Components of a Distance Matrix and Linear Combinations of Predictors, with Application to Studies of the Microbiome.
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- PLoS ONE, 2017, v. 12, n. 1, p. 1, doi. 10.1371/journal.pone.0168131
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- Article
MERIT: Controlling Monte‐Carlo error rate in large‐scale Monte‐Carlo hypothesis testing.
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- Statistics in Medicine, 2024, v. 43, n. 2, p. 279, doi. 10.1002/sim.9959
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- Article
Efficient estimation of indirect effects in case‐control studies using a unified likelihood framework.
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- Statistics in Medicine, 2022, v. 41, n. 15, p. 2879, doi. 10.1002/sim.9390
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- Article
Multisample adjusted U-statistics that account for confounding covariates.
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- 2018
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- Publication type:
- journal article
Testing microbiome associations with survival times at both the community and individual taxon levels.
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- PLoS Computational Biology, 2022, v. 18, n. 9, p. 1, doi. 10.1371/journal.pcbi.1010509
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- Article
Percentage of Gestational Diabetes Mellitus Attributable to Overweight and Obesity.
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- American Journal of Public Health, 2010, v. 100, n. 6, p. 1047, doi. 10.2105/AJPH.2009.172890
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- Article
Dysbiosis, inflammation, and response to treatment: a longitudinal study of pediatric subjects with newly diagnosed inflammatory bowel disease.
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- Genome Medicine, 2016, v. 8, p. 1, doi. 10.1186/s13073-016-0331-y
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- Article
Ranked severe maternal morbidity index for population-level surveillance at delivery hospitalization based on hospital discharge data.
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- PLoS ONE, 2023, v. 18, n. 11, p. 1, doi. 10.1371/journal.pone.0294140
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- Article
Constraining PERMANOVA and LDM to within-set comparisons by projection improves the efficiency of analyses of matched sets of microbiome data.
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- Microbiome, 2021, v. 9, n. 1, p. 1, doi. 10.1186/s40168-021-01034-9
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- Article
Associations between microbial communities and key chemical constituents in U.S. domestic moist snuff.
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- PLoS ONE, 2022, v. 17, n. 5, p. 1, doi. 10.1371/journal.pone.0267104
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- Article
Subtype-specific Transmission Probabilities for Human Immunodeficiency Virus Type 1 among Injecting Drug Users in Bangkok, Thailand.
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- American Journal of Epidemiology, 2002, v. 155, n. 2, p. 159, doi. 10.1093/aje/155.2.159
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- Article
Analysis of Dynamic Cohort Data.
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- American Journal of Epidemiology, 2001, v. 154, n. 4, p. 366, doi. 10.1093/aje/154.4.366
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- Article
Compositional analysis of microbiome data using the linear decomposition model (LDM).
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- Bioinformatics, 2023, v. 39, n. 11, p. 1, doi. 10.1093/bioinformatics/btad668
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- Article
rarefaction-without-resampling extension of PERMANOVA for testing presence–absence associations in the microbiome.
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- Bioinformatics, 2022, v. 38, n. 15, p. 3689, doi. 10.1093/bioinformatics/btac399
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- Article
Integrative analysis of relative abundance data and presence–absence data of the microbiome using the LDM.
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- Bioinformatics, 2022, v. 38, n. 10, p. 2915, doi. 10.1093/bioinformatics/btac181
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- Article
A rarefaction-based extension of the LDM for testing presence–absence associations in the microbiome.
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- Bioinformatics, 2021, v. 37, n. 12, p. 1652, doi. 10.1093/bioinformatics/btab012
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- Article
Testing hypotheses about the microbiome using the linear decomposition model (LDM).
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- Bioinformatics, 2020, v. 36, n. 14, p. 4106, doi. 10.1093/bioinformatics/btaa260
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- Article
Robust inference of population structure from next-genergation sequencing data with systematic differences in sequencing.
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- Bioinformatics, 2018, v. 34, n. 7, p. 1157, doi. 10.1093/bioinformatics/btx708
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- Article
MIDASim: a fast and simple simulator for realistic microbiome data.
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- Microbiome, 2024, v. 12, n. 1, p. 1, doi. 10.1186/s40168-024-01822-z
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- Publication type:
- Article
California Very Preterm Birth Study: design and characteristics of the population- and biospecimen bank-based nested case-control study.
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- Paediatric & Perinatal Epidemiology, 2012, v. 26, n. 3, p. 250, doi. 10.1111/j.1365-3016.2011.01252.x
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- Article
Impact of Experimental Bias on Compositional Analysis of Microbiome Data.
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- Genes, 2023, v. 14, n. 9, p. 1777, doi. 10.3390/genes14091777
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- Article
What Can We Learn about the Bias of Microbiome Studies from Analyzing Data from Mock Communities?
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- Genes, 2022, v. 13, n. 10, p. N.PAG, doi. 10.3390/genes13101758
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- Article
New testing strategy to detect early HIV-1 infection for use in incidence estimates and for clinical and prevention purposes.
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- 1998
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- Publication type:
- journal article
A Signed-Rank Test for Clustered Data.
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- Biometrics, 2008, v. 64, n. 2, p. 501, doi. 10.1111/j.1541-0420.2007.00923.x
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- Article
Marginal Analyses of Clustered Data When Cluster Size Is Informative.
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- Biometrics, 2003, v. 59, n. 1, p. 36, doi. 10.1111/1541-0420.00005
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- Article
Estimation of Integrated Transition Hazards and Stage Occupation Probabilities for Non-Markov Systems Under Dependent Censoring.
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- Biometrics, 2002, v. 58, n. 4, p. 792, doi. 10.1111/j.0006-341X.2002.00792.x
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- Article
HIV seroconverting donors delay their return: screening test implications.
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- 2002
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- Publication type:
- journal article
HIV seroconverting donors delay their return: screening test implications.
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- Transfusion, 2002, v. 42, n. 4, p. 414
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- Article
Testing Rare-Variant Association without Calling Genotypes Allows for Systematic Differences in Sequencing between Cases and Controls.
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- PLoS Genetics, 2016, v. 12, n. 5, p. 1, doi. 10.1371/journal.pgen.1006040
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- Article
PhredEM: a phred-score-informed genotype-calling approach for next-generation sequencing studies.
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- Genetic Epidemiology, 2017, v. 41, n. 5, p. 375, doi. 10.1002/gepi.22048
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- Article
Population-Based Association and Gene by Environment Interactions in Genetic Analysis Workshop 18.
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- Genetic Epidemiology, 2014, v. 38, p. S49, doi. 10.1002/gepi.21825
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- Article
Score-based adjustment for confounding by population stratification in genetic association studies.
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- Genetic Epidemiology, 2010, v. 34, n. 5, p. 383, doi. 10.1002/gepi.20487
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- Article
A novel haplotype-sharing approach for genome-wide case-control association studies implicates the calpastatin gene in Parkinson's disease.
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- Genetic Epidemiology, 2009, v. 33, n. 8, p. 657, doi. 10.1002/gepi.20417
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- Article
Robust estimation and testing of haplotype effects in case-control studies.
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- Genetic Epidemiology, 2008, v. 32, n. 1, p. 29, doi. 10.1002/gepi.20259
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- Article
Inference on haplotype/disease association using parent-affected-child data: the projection conditional on parental haplotypes method.
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- Genetic Epidemiology, 2007, v. 31, n. 3, p. 211, doi. 10.1002/gepi.20203
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- Article
Improved association analyses of disease subtypes in case‐parent triads.
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- Genetic Epidemiology, 2006, v. 30, n. 3, p. 209, doi. 10.1002/gepi.20138
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- Article
Comparison of prospective and retrospective methods for haplotype inference in case‐control studiesThis article is a US Government work and, as such, is in the public domain in the United States of America.
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- Genetic Epidemiology, 2004, v. 27, n. 3, p. 192, doi. 10.1002/gepi.20020
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- Article
Standardization and denoising algorithms for mass spectra to classify whole-organism bacterial specimens.
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- Bioinformatics, 2004, v. 20, n. 17, p. 3128, doi. 10.1093/bioinformatics/bth372
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- Article
Effect of Antiretroviral Therapy for the Treatment of Human Immunodeficiency Virus (HIV)-1 in Pregnancy on Gestational Weight Gain.
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- Clinical Infectious Diseases, 2022, v. 75, n. 4, p. 665, doi. 10.1093/cid/ciab994
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- Article
Genetic Studies of a Cluster of Acute Lymphoblastic Leukemia Cases in Churchill County, Nevada.
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- Environmental Health Perspectives, 2007, v. 115, n. 1, p. 158, doi. 10.1289/ehp.9025
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- Article
Investigating Childhood Leukemia in Churchill County, Nevada.
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- Environmental Health Perspectives, 2007, v. 115, n. 1, p. 151, doi. 10.1289/ehp.9022
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- Article
Marginal estimation for multi-stage models: waiting time distributions and competing risks analyses.
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- Statistics in Medicine, 2002, v. 21, n. 1, p. 3, doi. 10.1002/sim.967
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- Publication type:
- Article
Modelling the female-to-male per-act HIV transmission probability in an emerging epidemic in Asia.
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- Statistics in Medicine, 1994, v. 13, n. 19/20, p. 2097, doi. 10.1002/sim.4780131918
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- Article
Vaginal Microbiome Composition in Early Pregnancy and Risk of Spontaneous Preterm and Early Term Birth Among African American Women.
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- Frontiers in Cellular & Infection Microbiology, 2021, v. 11, p. N.PAG, doi. 10.3389/fcimb.2021.641005
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- Article
Robust Regression Analysis of Copy Number Variation Data based on a Univariate Score.
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- PLoS ONE, 2014, v. 9, n. 2, p. 1, doi. 10.1371/journal.pone.0086272
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- Publication type:
- Article
Effects of maternal smokeless tobacco use on selected pregnancy outcomes in Alaska Native women: a case-control study.
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- Acta Obstetricia et Gynecologica Scandinavica, 2013, v. 92, n. 6, p. 648, doi. 10.1111/aogs.12124
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- Article
Maternal smokeless tobacco use in Alaska Native women and singleton infant birth size.
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- Acta Obstetricia et Gynecologica Scandinavica, 2012, v. 91, n. 1, p. 93, doi. 10.1111/j.1600-0412.2011.01273.x
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- Article
Nonparametric Maximum Likelihood Estimation for Competing Risks Survival Data Subject to Interval Censoring and Truncation.
- Published in:
- Biometrics, 2001, v. 57, n. 1, p. 74, doi. 10.1111/j.0006-341X.2001.00074.x
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- Publication type:
- Article
Nonparametric Estimation for the Three-Stage Irreversible Illness-Death Model.
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- Biometrics, 2000, v. 56, n. 3, p. 841, doi. 10.1111/j.0006-341X.2000.00841.x
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- Article