Works by Sapkota, Sirjan

Results: 17

Dissecting the Genetic Architecture of Carbon Partitioning in Sorghum Using Multiscale Phenotypes.

Published in:

Frontiers in Plant Science, 2022, v. 13, p. 1, doi. 10.3389/fpls.2022.790005

By:

Boatwright, J. Lucas;
Sapkota, Sirjan;
Myers, Matthew;
Kumar, Neeraj;
Cox, Alex;
Jordan, Kathleen E.;
Kresovich, Stephen

Publication type:

Article

Sorghum Association Panel whole‐genome sequencing establishes cornerstone resource for dissecting genomic diversity.

Published in:

Plant Journal, 2022, v. 111, n. 3, p. 888, doi. 10.1111/tpj.15853

By:

Boatwright, J. Lucas;
Sapkota, Sirjan;
Jin, Hongyu;
Schnable, James C.;
Brenton, Zachary;
Boyles, Richard;
Kresovich, Stephen

Publication type:

Article

Genome‐wide association studies of antimicrobial activity in global sorghum.

Published in:

Crop Science, 2021, v. 61, n. 2, p. 1301, doi. 10.1002/csc2.20348

By:

Shields, Lindsay;
Gang, Yang;
Jordan, Kathleen;
Sapkota, Sirjan;
Boatwright, Lucas;
Jiang, Xiuping;
Kresovich, Stephen;
Boyles, Richard

Publication type:

Article

Impact of sorghum racial structure and diversity on genomic prediction of grain yield components.

Published in:

Crop Science, 2020, v. 60, n. 1, p. 132, doi. 10.1002/csc2.20060

By:

Sapkota, Sirjan;
Boyles, Richard;
Cooper, Elizabeth;
Brenton, Zachary;
Myers, Matthew;
Kresovich, Stephen

Publication type:

Article

Identification of Novel Genomic Associations and Gene Candidates for Grain Starch Content in Sorghum.

Published in:

Genes, 2020, v. 11, n. 12, p. 1448, doi. 10.3390/genes11121448

By:

Sapkota, Sirjan;
Boatwright, J. Lucas;
Jordan, Kathleen;
Boyles, Richard;
Kresovich, Stephen

Publication type:

Article

Discovering useful genetic variation in the seed parent gene pool for sorghum improvement.

Published in:

Frontiers in Genetics, 2023, p. 1, doi. 10.3389/fgene.2023.1221148

By:

Kumar, Neeraj;
Boatwright, J. Lucas;
Sapkota, Sirjan;
Brenton, Zachary W.;
Ballén-Taborda, Carolina;
Myers, Matthew T.;
Cox, William A.;
Jordan, Kathleen E.;
Kresovich, Stephen;
Boyles, Richard E.

Publication type:

Article

Functional genomic effects of indels using Bayesian genome-phenome wide association studies in sorghum.

Published in:

Frontiers in Genetics, 2023, v. 14, p. 1, doi. 10.3389/fgene.2023.1143395

By:

Boatwright, J. Lucas;
Sapkota, Sirjan;
Kresovich, Stephen

Publication type:

Article

Meta-analysis identifies pleiotropic loci controlling phenotypic trade-offs in sorghum.

Published in:

Genetics, 2021, v. 218, n. 3, p. 1, doi. 10.1093/genetics/iyab087

By:

Mural, Ravi V.;
Grzybowski, Marcin;
Chenyong Miao;
Damke, Alyssa;
Sapkota, Sirjan;
Boyles, Richard E.;
Fernandez, Maria G. Salas;
Schnable, Patrick S.;
Sigmon, Brandi;
Kresovich, Stephen;
Schnable, James C.

Publication type:

Article

Correction: Double triage to identify poorly annotated genes in maize: The missing link in community curation.

Published in:

2024

By:

Tello-Ruiz, Marcela K.;
Marco, Cristina F.;
Hsu, Fei-Man;
Khangura, Rajdeep S.;
Qiao, Pengfei;
Sapkota, Sirjan;
Stitzer, Michelle C.;
Wasikowski, Rachael;
Wu, Hao;
Zhan, Junpeng;
Chougule, Kapeel;
Barone, Lindsay M.;
Ghiban, Cornel;
Muna, Demitri;
Olson, Andrew C.;
Wang, Liya;
Ware, Doreen;
Micklos, David A.

Publication type:

Correction Notice

Multi-Trait Regressor Stacking Increased Genomic Prediction Accuracy of Sorghum Grain Composition.

Published in:

Agronomy, 2020, v. 10, n. 9, p. 1221, doi. 10.3390/agronomy10091221

By:

Sapkota, Sirjan;
Boatwright, J. Lucas;
Jordan, Kathleen;
Boyles, Richard;
Kresovich, Stephen

Publication type:

Article

In Silico and Fluorescence In Situ Hybridization Mapping Reveals Collinearity between the Pennisetum squamulatum Apomixis Carrier-Chromosome and Chromosome 2 of Sorghum and Foxtail Millet.

Published in:

PLoS ONE, 2016, v. 11, n. 3, p. 1, doi. 10.1371/journal.pone.0152411

By:

Sapkota, Sirjan;
Conner, Joann A.;
Hanna, Wayne W.;
Simon, Bindu;
Fengler, Kevin;
Deschamps, Stéphane;
Cigan, Mark;
Ozias-Akins, Peggy

Publication type:

Article

Double triage to identify poorly annotated genes in maize: The missing link in community curation.

Published in:

PLoS ONE, 2019, v. 14, n. 10, p. 1, doi. 10.1371/journal.pone.0224086

By:

Tello-Ruiz, Marcela K.;
Marco, Cristina F.;
Hsu, Fei-Man;
Khangura, Rajdeep S.;
Qiao, Pengfei;
Sapkota, Sirjan;
Stitzer, Michelle C.;
Wasikowski, Rachael;
Wu, Hao;
Zhan, Junpeng;
Chougule, Kapeel;
Barone, Lindsay C.;
Ghiban, Cornel;
Muna, Demitri;
Olson, Andrew C.;
Wang, Liya;
Ware, Doreen;
Micklos, David A.

Publication type:

Article

Registration of the sorghum carbon‐partitioning nested association mapping (CP‐NAM) population.

Published in:

Journal of Plant Registrations, 2022, v. 16, n. 3, p. 656, doi. 10.1002/plr2.20229

By:

Kumar, Neeraj;
Brenton, Zachary;
Myers, Matthew T.;
Boyles, Richard E.;
Sapkota, Sirjan;
Boatwright, J. L.;
Cox, W. A.;
Jordan, Kathleen E.;
Kresovich, Stephen

Publication type:

Article

Targeted sequencing of a complex locus within a polyploid genome using reduced representation libraries.

Published in:

Molecular Breeding, 2016, v. 36, n. 5, p. 1, doi. 10.1007/s11032-016-0482-y

By:

Conner, Joann;
Sapkota, Sirjan;
Deschamps, Stéphane;
Fengler, Kevin;
Cigan, Mark;
Ozias-Akins, Peggy

Publication type:

Article

Development and characterization of a sorghum multiparent advanced generation intercross (MAGIC) population for capturing diversity among seed parent gene pool.

Published in:

G3: Genes | Genomes | Genetics, 2023, v. 13, n. 4, p. 1, doi. 10.1093/g3journal/jkad037

By:

Kumar, Neeraj;
Boatwright, J. Lucas;
Brenton, Zachary W.;
Sapkota, Sirjan;
Ballén-Taborda, Carolina;
Myers, Matthew T.;
Cox, William A.;
Jordan, Kathleen E.;
Kresovich, Stephen;
Boyles, Richard E.

Publication type:

Article

Genomic prediction of hybrid performance for agronomic traits in sorghum.

Published in:

G3: Genes | Genomes | Genetics, 2023, v. 13, n. 4, p. 1, doi. 10.1093/g3journal/jkac311

By:

Sapkota, Sirjan;
Boatwright, Jon Lucas;
Kumar, Neeraj;
Myers, Matthew;
Cox, Alex;
Ackerman, Arlyn;
Caughman, William;
Brenton, Zachary W.;
Boyles, Richard E.;
Kresovich, Stephen

Publication type:

Article

Genetic characterization of a Sorghum bicolor multiparent mapping population emphasizing carbon-partitioning dynamics.

Published in:

G3: Genes | Genomes | Genetics, 2021, v. 11, n. 4, p. 1, doi. 10.1093/g3journal/jkab060

By:

Lucas Boatwright, J.;
Brenton, Zachary W.;
Boyles, Richard E.;
Sapkota, Sirjan;
Myers, Matthew T.;
Jordan, Kathleen E.;
Dale, Savanah M.;
Shakoor, Nadia;
Cooper, Elizabeth A.;
Morris, Geoffrey P.;
Kresovich, Stephen

Publication type:

Article