Works by Samuel, Aravinthan

Results: 33

Monoaminergic Orchestration of Motor Programs in a Complex C. elegans Behavior.

Published in:

PLoS Biology, 2013, v. 11, n. 4, p. 1, doi. 10.1371/journal.pbio.1001529

By:

Donnelly, Jamie L.;
Clark, Christopher M.;
Leifer, Andrew M.;
Pirri, Jennifer K.;
Haburcak, Marian;
Francis, Michael M.;
Samuel, Aravinthan D. T.;
Alkema, Mark J.

Publication type:

Article

The Core Apoptotic Executioner Proteins CED-3 and CED- 4 Promote Initiation of Neuronal Regeneration in Caenorhabditis elegans.

Published in:

PLoS Biology, 2012, v. 10, n. 5, p. 1, doi. 10.1371/journal.pbio.1001331

By:

Pinan-Lucarre, Berangere;
Gabel, Christopher V.;
Reina, Christopher P.;
Hulme, S. Elizabeth;
Shevkoplyas, Sergey S.;
Slone, R. Daniel;
Jian Xue;
Yujie Qiao;
Weisberg, Sarah;
Roodhouse, Kevin;
Lin Sun;
Whitesides, George M.;
Samuel, Aravinthan;
Driscoll, Monica

Publication type:

Article

Neural Circuits Mediate Electrosensory Behavior in Caenorhabditis elegans.

Published in:

Journal of Neuroscience, 2007, v. 27, n. 28, p. 7586, doi. 10.1523/JNEUROSCI.0775-07.2007

By:

Gabel, Christopher V.;
Gabel, Harrison;
Pavlichin, Dmitri;
Kao, Albert;
Clark, Damon A.;
Samuel, Aravinthan D. T.

Publication type:

Article

Temporal Activity Patterns in Thermosensory Neurons of Freely Moving Caenorhabditis elegans Encode Spatial Thermal Gradients.

Published in:

Journal of Neuroscience, 2007, v. 27, n. 23, p. 6083, doi. 10.1523/JNEUROSCI.1032-07.2007

By:

Clark, Damon A.;
Gabel, Christopher V.;
Gabel, Harrison;
Samuel, Aravinthan D. T.

Publication type:

Article

The AFD Sensory Neurons Encode Multiple Functions Underlying Thermotactic Behavior in Caenorhabditis elegans.

Published in:

Journal of Neuroscience, 2006, v. 26, n. 28, p. 7, doi. 10.1523/JNEUROSCI.1137-06.2006

By:

Clark, Damon A.;
Biron, David;
Sengupta, Piali;
Samuel, Aravinthan D. T.

Publication type:

Article

Synaptic Activity of the AFD Neuron in Caenorhabditis elegans Correlates with Thermotactic Memory.

Published in:

Journal of Neuroscience, 2003, v. 23, n. 2, p. 373, doi. 10.1523/JNEUROSCI.23-02-00373.2003

By:

Samuel, Aravinthan D.T.;
Silva, Ruwan A.;
Murthy, Venkatesh N.

Publication type:

Article

Envelope structure of Synechococcus sp. WH8113, a nonflagellated swimming cyanobacterium.

Published in:

BMC Microbiology, 2001, v. 1, p. 1

By:

Samuel, Aravinthan D. T.;
Petersen, Jennifer D.;
Reese, Thomas S.

Publication type:

Article

Circuits for integrating learned and innate valences in the insect brain.

Published in:

eLife, 2021, p. 1, doi. 10.7554/eLife.62567

By:

Eschbach, Claire;
Fushiki, Akira;
Winding, Michael;
Afonso, Bruno;
Andrade, Ingrid V.;
Cocanougher, Benjamin T.;
Eichler, Katharina;
Gepner, Ruben;
Guangwei Si;
Valdes-Aleman, Javier;
Fetter, Richard D.;
Gershow, Marc;
Jefferis, Gregory S. X. E.;
Samuel, Aravinthan D. T.;
Truman, James W.;
Cardona, Albert;
Zlatic, Marta

Publication type:

Article

Corollary discharge promotes a sustained motor state in a neural circuit for navigation.

Published in:

eLife, 2021, p. 1, doi. 10.7554/eLife.68848

By:

Ji, Ni;
Venkatachalam, Vivek;
Rodgers, Hillary Denise;
Hung, Wesley;
Kawano, Taizo;
Clark, Christopher M.;
Lim, Maria;
Alkema, Mark J.;
Zhen, Mei;
Samuel, Aravinthan D. T.

Publication type:

Article

Navigational Decision Making in Drosophila Thermotaxis.

Published in:

Journal of Neuroscience, 2010, v. 30, n. 12, p. 4261, doi. 10.1523/JNEUROSCI.4090-09.2010

By:

Linjiao Luo;
Gershow, Marc;
Rosenzweig, Mark;
KyeongJin Kang;
Fang-Yen, Christopher;
Garrity, Paul A.;
Samuel, Aravinthan D. T.

Publication type:

Article

Calcium dynamics during fertilization in C. elegans.

Published in:

BMC Developmental Biology, 2001, v. 1, p. 1

By:

Samuel, Aravinthan D. T.;
Murthy, Venkatesh N.;
Hengartner, Michael O.

Publication type:

Article

Erratum: Multimodal stimulus coding by a gustatory sensory neuron in Drosophila larvae.

Published in:

Nature Communications, 2016, v. 7, n. 3, p. 11028, doi. 10.1038/ncomms11028

By:

van Giesen, Lena;
Hernandez-Nunez, Luis;
Delasoie-Baranek, Sophie;
Colombo, Martino;
Renaud, Philippe;
Bruggmann, Rémy;
Benton, Richard;
Samuel, Aravinthan D. T.;
Sprecher, Simon G.

Publication type:

Article

Multimodal stimulus coding by a gustatory sensory neuron in Drosophila larvae.

Published in:

Nature Communications, 2016, v. 7, n. 2, p. 10687, doi. 10.1038/ncomms10687

By:

van Giesen, Lena;
Hernandez-Nunez, Luis;
Delasoie-Baranek, Sophie;
Colombo, Martino;
Renaud, Philippe;
Bruggmann, Rémy;
Benton, Richard;
Samuel, Aravinthan D. T.;
Sprecher, Simon G.

Publication type:

Article

Dedicated photoreceptor pathways in Drosophila larvae mediate navigation by processing either spatial or temporal cues.

Published in:

Nature Communications, 2018, v. 9, n. 1, p. 1, doi. 10.1038/s41467-018-03520-5

By:

Humberg, Tim-Henning;
Bruegger, Pascal;
Afonso, Bruno;
Zlatic, Marta;
Truman, James W.;
Gershow, Marc;
Samuel, Aravinthan;
Sprecher, Simon G.

Publication type:

Article

Controlling airborne cues to study small animal navigation.

Published in:

Nature Methods, 2012, v. 9, n. 3, p. 290, doi. 10.1038/nmeth.1853

By:

Gershow, Marc;
Berck, Matthew;
Mathew, Dennis;
Luo, Linjiao;
Kane, Elizabeth A;
Carlson, John R;
Samuel, Aravinthan D T

Publication type:

Article

Optogenetic manipulation of neural activity in freely moving Caenorhabditis elegans.

Published in:

Nature Methods, 2011, v. 8, n. 2, p. 147, doi. 10.1038/nmeth.1554

By:

Leifer, Andrew M.;
Fang-Yen, Christopher;
Gershow, Marc;
Alkema, Mark J.;
Samuel, Aravinthan D. T.

Publication type:

Article

Microfluidics: streamlining discovery in worm biology.

Published in:

Nature Methods, 2008, v. 5, n. 7, p. 589, doi. 10.1038/nmeth0708-589

By:

Hulme, S. Elizabeth;
Shevkoplyas, Sergey S.;
Samuel, Aravinthan

Publication type:

Article

A diacylglycerol kinase modulates long-term thermotactic behavioral plasticity in C. elegans.

Published in:

Nature Neuroscience, 2006, v. 9, n. 12, p. 1499, doi. 10.1038/nn1796

By:

Biron, David;
Shibuya, Mayumi;
Gabel, Christopher;
Wasserman, Sara M.;
Clark, Damon A.;
Brown, Adam;
Sengupta, Piali;
Samuel, Aravinthan D. T.

Publication type:

Article

Shifts in the Distribution of Mass Densities Is a Signature of Caloric Restriction in <i>Caenorhabditis elegans</i>.

Published in:

PLoS ONE, 2013, v. 8, n. 7, p. 1, doi. 10.1371/journal.pone.0069651

By:

Reina, Alfonso;
Subramaniam, Anand Bala;
Laromaine, Anna;
Samuel, Aravinthan D. T.;
Whitesides, George M.

Publication type:

Article

Dopamine Signaling Is Essential for Precise Rates of Locomotion by C. elegans.

Published in:

PLoS ONE, 2012, v. 7, n. 6, p. 1, doi. 10.1371/journal.pone.0038649

By:

Omura, Daniel T.;
Clark, Damon A.;
Samuel, Aravinthan D. T.;
Robert Horvitz, H.

Publication type:

Article

Two Alternating Motor Programs Drive Navigation in Drosophila Larva.

Published in:

PLoS ONE, 2011, v. 6, n. 8, p. 1, doi. 10.1371/journal.pone.0023180

By:

Lahiri, Subhaneil;
Shen, Konlin;
Klein, Mason;
Tang, Anji;
Kane, Elizabeth;
Gershow, Marc;
Garrity, Paul;
Samuel, Aravinthan D. T.

Publication type:

Article

Corrigendum: A Pipeline for Volume Electron Microscopy of the Caenorhabditis elegans Nervous System.

Published in:

2019

By:

Mulcahy, Ben;
Witvliet, Daniel;
Holmyard, Douglas;
Mitchell, James;
Chisholm, Andrew D.;
Meirovitch, Yaron;
Samuel, Aravinthan D. T.;
Zhen, Mei

Publication type:

Correction Notice

A Pipeline for Volume Electron Microscopy of the Caenorhabditis elegans Nervous System.

Published in:

Frontiers in Neural Circuits, 2018, p. N.PAG, doi. 10.3389/fncir.2018.00094

By:

Mulcahy, Ben;
Witvliet, Daniel;
Holmyard, Douglas;
Mitchell, James;
Chisholm, Andrew D.;
Samuel, Aravinthan D. T.;
Zhen, Mei

Publication type:

Article

Defining Specificity Determinants of cGMP Mediated Gustatory Sensory Transduction in Caenorhabditis elegans.

Published in:

Genetics, 2013, v. 194, n. 4, p. 885, doi. 10.1534/genetics.113.152660

By:

Smith, Heidi K.;
Luo, Linjiao;
O'Halloran, Damien;
Guo, Dagang;
Xin-Yun Huang;
Samuel, Aravinthan D. T.;
Hobert, Oliver

Publication type:

Article

Exploratory search during directed navigation in C. elegans and Drosophila larva.

Published in:

eLife, 2017, p. 1, doi. 10.7554/eLife.30503

By:

Klein, Mason;
Krivov, Sergei V.;
Ferrer, Anggie J.;
Linjiao Luo;
Samuel, Aravinthan D. T.;
Karplus, Martin

Publication type:

Article

Neuroendocrine modulation sustains the C. elegans forward motor state.

Published in:

eLife, 2016, p. 1, doi. 10.7554/eLife.19887

By:

Lim, Maria A.;
Chitturi, Jyothsna;
Laskova, Valeriya;
Jun Meng;
Findeis, Daniel;
Wiekenberg, Anne;
Mulcahy, Ben;
Linjiao Luo;
Yan Li;
Yangning Lu;
Wesley Hung;
Yixin Qu;
Chi-Yip Ho;
Holmyard, Douglas;
Ni Ji;
McWhirter, Rebecca;
Samuel, Aravinthan D. T.;
Miller, David M.;
Schnabel, Ralf;
Calarco, John A.

Publication type:

Article

Distinct combinations of variant ionotropic glutamate receptors mediate thermosensation and hygrosensation in Drosophila.

Published in:

eLife, 2016, p. 1, doi. 10.7554/eLife.17879

By:

Knecht, Zachary A.;
Silbering, Ana F.;
Ni, Lina;
Klein, Mason;
Budelli, Gonzalo;
Bell, Rati;
Abuin, Liliane;
Ferrer, Anggie J.;
Samuel, Aravinthan D. T.;
Benton, Richard;
Garrity, Paul A.

Publication type:

Article

The wiring diagram of a glomerular olfactory system.

Published in:

eLife, 2016, p. 1, doi. 10.7554/eLife.14859

By:

Berck, Matthew E.;
Khandelwal, Avinash;
Claus, Lindsey;
Hernandez-Nunez, Luis;
Guangwei Si;
Tabone, Christopher J.;
Feng Li;
Truman, James W.;
Fetter, Rick D.;
Louis, Matthieu;
Samuel, Aravinthan D. T.;
Cardona, Albert

Publication type:

Article

An extrasynaptic GABAergic signal modulates a pattern of forward movement in Caenorhabditis elegans.

Published in:

eLife, 2016, p. 1, doi. 10.7554/eLife.14197

By:

Yu Shen;
Quan Wen;
He Liu;
Connie Zhong;
Yuqi Qin;
Harris, Gareth;
Kawano, Taizo;
Min Wu;
Tianqi Xu;
Samuel, Aravinthan D. T.;
Yun Zhang

Publication type:

Article

The Ionotropic Receptors IR21a and IR25a mediate cool sensing in Drosophila.

Published in:

eLife, 2016, p. 1, doi. 10.7554/eLife.13254

By:

Ni, Lina;
Klein, Mason;
Svec, Kathryn V.;
Budelli, Gonzalo;
Chang, Elaine C.;
Ferrer, Anggie J.;
Benton, Richard;
Samuel, Aravinthan D. T.;
Garrit, Paul A.

Publication type:

Article

Reverse-correlation analysis of navigation dynamics in Drosophila larva using optogenetics.

Published in:

eLife, 2015, p. 1, doi. 10.7554/eLife.06225

By:

Hernandez-Nunez, Luis;
Belina, Jonas;
Klein, Mason;
Guangwei Si;
Claus, Lindsey;
Carlson, John R.;
Samuel, Aravinthan D. T.

Publication type:

Article

Variability in thermal and phototactic preferences in Drosophila may reflect an adaptive bet-hedging strategy.

Published in:

Evolution, 2015, v. 69, n. 12, p. 3171, doi. 10.1111/evo.12813

By:

Kain, Jamey S.;
Zhang, Sarah;
Akhund‐Zade, Jamilla;
Samuel, Aravinthan D. T.;
Klein, Mason;
Bivort, Benjamin L.

Publication type:

Article

mEMbrain: an interactive deep learning MATLAB tool for connectomic segmentation on commodity desktops.

Published in:

Frontiers in Neural Circuits, 2023, p. 1, doi. 10.3389/fncir.2023.952921

By:

Pavarino, Elisa C.;
Yang, Emma;
Dhanyasi, Nagaraju;
Wang, Mona D.;
Bidel, Flavie;
Xiaotang Lu;
Fuming Yang;
Park, Core Francisco;
Renuka, Mukesh Bangalore;
Drescher, Brandon;
Samuel, Aravinthan D. T.;
Hochner, Binyamin;
Katz, Paul S.;
Mei Zhen;
Lichtman, Jeff W.;
Meirovitch, Yaron

Publication type:

Article