Found: 17

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  • A multi-omic analysis of human naïve CD4+ T cells.

    Published in:
    BMC Systems Biology, 2015, v. 9, p. 1, doi. 10.1186/s12918-015-0225-4
    By:
    • Mitchell, Christopher J.;
    • Getnet, Derese;
    • Min-Sik Kim;
    • Manda, Srikanth S.;
    • Kumar, Praveen;
    • Tai-Chung Huang;
    • Pinto, Sneha M.;
    • Nirujogi, Raja Sekhar;
    • Mio Iwasaki;
    • Shaw, Patrick G.;
    • Xinyan Wu;
    • Jun Zhong;
    • Chaerkady, Raghothama;
    • Marimuthu, Arivusudar;
    • Muthusamy, Babylakshmi;
    • Sahasrabuddhe, Nandini A.;
    • Raju, Rajesh;
    • Bowman, Caitlyn;
    • Danilova, Ludmila;
    • Cutler, Jevon
    Publication type:
    Article

  • Activation of diverse signalling pathways by oncogenic PIK3CA mutations.

    Published in:
    Nature Communications, 2014, v. 5, n. 9, p. 4961, doi. 10.1038/ncomms5961
    By:
    • Wu, Xinyan;
    • Renuse, Santosh;
    • Sahasrabuddhe, Nandini A.;
    • Zahari, Muhammad Saddiq;
    • Chaerkady, Raghothama;
    • Kim, Min-Sik;
    • Nirujogi, Raja S.;
    • Mohseni, Morassa;
    • Kumar, Praveen;
    • Raju, Rajesh;
    • Zhong, Jun;
    • Yang, Jian;
    • Neiswinger, Johnathan;
    • Jeong, Jun-Seop;
    • Newman, Robert;
    • Powers, Maureen A.;
    • Somani, Babu Lal;
    • Gabrielson, Edward;
    • Sukumar, Saraswati;
    • Stearns, Vered
    Publication type:
    Article

  • Correction to: Quantitative phosphoproteomic analysis reveals reciprocal activation of receptor tyrosine kinases between cancer epithelial cells and stromal fibroblasts.

    Published in:
    2018
    By:
    • Wu, Xinyan;
    • Zahari, Muhammad Saddiq;
    • Renuse, Santosh;
    • Sahasrabuddhe, Nandini A.;
    • Chaerkady, Raghothama;
    • Kim, Mi-Sik;
    • Fackler, Mary Jo;
    • Stampfer, Martha;
    • Gabrielson, Edward;
    • Sukumar, Saraswati;
    • Pandey, Akhilesh
    Publication type:
    Correction Notice

  • Quantitative phosphoproteomic analysis reveals reciprocal activation of receptor tyrosine kinases between cancer epithelial cells and stromal fibroblasts.

    Published in:
    Clinical Proteomics, 2018, v. 15, n. 1, p. N.PAG, doi. 10.1186/s12014-018-9197-x
    By:
    • Wu, Xinyan;
    • Zahari, Muhammad Saddiq;
    • Renuse, Santosh;
    • Sahasrabuddhe, Nandini A.;
    • Chaerkady, Raghothama;
    • Kim, Min-Sik;
    • Fackler, Mary Jo;
    • Stampfer, Martha;
    • Gabrielson, Edward;
    • Sukumar, Saraswati;
    • Pandey, Akhilesh
    Publication type:
    Article

  • The <i>Escherichia coli</i> Phosphotyrosine Proteome Relates to Core Pathways and Virulence.

    Published in:
    PLoS Pathogens, 2013, v. 9, n. 6, p. 1, doi. 10.1371/journal.ppat.1003403
    By:
    • Hansen, Anne-Marie;
    • Chaerkady, Raghothama;
    • Sharma, Jyoti;
    • Díaz-Mejía, J. Javier;
    • Tyagi, Nidhi;
    • Renuse, Santosh;
    • Jacob, Harrys K. C.;
    • Pinto, Sneha M.;
    • Sahasrabuddhe, Nandini A.;
    • Kim, Min-Sik;
    • Delanghe, Bernard;
    • Srinivasan, Narayanaswamy;
    • Emili, Andrew;
    • Kaper, James B.;
    • Pandey, Akhilesh
    Publication type:
    Article

  • SILAC-based quantitative proteomic analysis reveals widespread molecular alterations in human skin keratinocytes upon chronic arsenic exposure.

    Published in:
    Proteomics, 2017, v. 17, n. 6, p. n/a, doi. 10.1002/pmic.201600257
    By:
    • Mir, Sartaj Ahmad;
    • Pinto, Sneha M.;
    • Paul, Somnath;
    • Raja, Remya;
    • Nanjappa, Vishalakshi;
    • Syed, Nazia;
    • Advani, Jayshree;
    • Renuse, Santosh;
    • Sahasrabuddhe, Nandini A.;
    • Prasad, T. S. Keshava;
    • Giri, Ashok K.;
    • Gowda, Harsha;
    • Chatterjee, Aditi
    Publication type:
    Article

  • Silencing of high-mobility group box 2 (HMGB2) modulates cisplatin and 5-fluorouracil sensitivity in head and neck squamous cell carcinoma.

    Published in:
    Proteomics, 2015, v. 15, n. 2/3, p. 383, doi. 10.1002/pmic.201400338
    By:
    • Syed, Nazia;
    • Chavan, Sandip;
    • Sahasrabuddhe, Nandini A.;
    • Renuse, Santosh;
    • Sathe, Gajanan;
    • Nanjappa, Vishalakshi;
    • Radhakrishnan, Aneesha;
    • Raja, Remya;
    • Pinto, Sneha M.;
    • Srinivasan, Anand;
    • Prasad, T. S. Keshava;
    • Srikumar, Kotteazeth;
    • Gowda, Harsha;
    • Santosh, Vani;
    • Sidransky, David;
    • Califano, Joseph A.;
    • Pandey, Akhilesh;
    • Chatterjee, Aditi
    Publication type:
    Article

  • A proteogenomic approach to map the proteome of an unsequenced pathogen - Leishmania donovani.

    Published in:
    Proteomics, 2012, v. 12, n. 6, p. 832, doi. 10.1002/pmic.201100505
    By:
    • Pawar, Harsh;
    • Sahasrabuddhe, Nandini A.;
    • Renuse, Santosh;
    • Keerthikumar, Shivakumar;
    • Sharma, Jyoti;
    • Kumar, Ghantasala. S. Sameer;
    • Venugopal, Abhilash;
    • Sekhar, Nirujogi Raja;
    • Kelkar, Dhanashree S.;
    • Nemade, Harshal;
    • Khobragade, Sweta N.;
    • Muthusamy, Babylakshmi;
    • Kandasamy, Kumaran;
    • Harsha, H. C.;
    • Chaerkady, Raghothama;
    • Patole, Milind S.;
    • Pandey, Akhilesh
    Publication type:
    Article

  • Comprehensive proteomic analysis of human bile.

    Published in:
    Proteomics, 2011, v. 11, n. 23, p. 4443, doi. 10.1002/pmic.201100197
    By:
    • Barbhuiya, Mustafa A.;
    • Sahasrabuddhe, Nandini A.;
    • Pinto, Sneha M.;
    • Muthusamy, Babylakshmi;
    • Singh, Tekcham D.;
    • Nanjappa, Vishalakshi;
    • Keerthikumar, Shivakumar;
    • Delanghe, Bernard;
    • Harsha, H. C.;
    • Chaerkady, Raghothama;
    • Jalaj, Visvajit;
    • Gupta, Sanjeev;
    • Shrivastav, Braj R.;
    • Tiwari, Pramod K.;
    • Pandey, Akhilesh
    Publication type:
    Article

  • Quantitative temporal proteomic analysis of human embryonic stem cell differentiation into oligodendrocyte progenitor cells.

    Published in:
    Proteomics, 2011, v. 11, n. 20, p. 4007, doi. 10.1002/pmic.201100107
    By:
    • Chaerkady, Raghothama;
    • Letzen, Brian;
    • Renuse, Santosh;
    • Sahasrabuddhe, Nandini A.;
    • Kumar, Praveen;
    • All, Angelo H.;
    • Thakor, Nitish V.;
    • Delanghe, Bernard;
    • Gearhart, John D.;
    • Pandey, Akhilesh;
    • Kerr, Candace L.
    Publication type:
    Article

  • A draft map of the human proteome.

    Published in:
    Nature, 2014, v. 509, n. 7502, p. 1, doi. 10.1038/nature13302
    By:
    • Min-Sik Kim;
    • Pinto, Sneha M.;
    • Getnet, Derese;
    • Nirujogi, Raja Sekhar;
    • Manda, Srikanth S.;
    • Chaerkady, Raghothama;
    • Madugundu, Anil K.;
    • Kelkar, Dhanashree S.;
    • Isserlin, Ruth;
    • Jain, Shobhit;
    • Thomas, Joji K.;
    • Muthusamy, Babylakshmi;
    • Leal-Rojas, Pamela;
    • Kumar, Praveen;
    • Sahasrabuddhe, Nandini A.;
    • Balakrishnan, Lavanya;
    • Advani, Jayshree;
    • George, Bijesh;
    • Renuse, Santosh;
    • Selvan, Lakshmi Dhevi N.
    Publication type:
    Article

  • Corrigendum: A dual specificity kinase, DYRK1A, as a potential therapeutic target for head and neck squamous cell carcinoma.

    Published in:
    Scientific Reports, 2017, p. 46864, doi. 10.1038/srep46864
    By:
    • Radhakrishnan, Aneesha;
    • Nanjappa, Vishalakshi;
    • Raja, Remya;
    • Sathe, Gajanan;
    • Puttamallesh, Vinuth N.;
    • Jain, Ankit P.;
    • Pinto, Sneha M.;
    • Balaji, Sai A.;
    • Chavan, Sandip;
    • Sahasrabuddhe, Nandini A.;
    • Mathur, Premendu P.;
    • Kumar, Mahesh M.;
    • Prasad, T. S. Keshava;
    • Santosh, Vani;
    • Sukumar, Geethanjali;
    • Califano, Joseph A.;
    • Rangarajan, Annapoorni;
    • Sidransky, David;
    • Pandey, Akhilesh;
    • Gowda, Harsha
    Publication type:
    Article

  • A dual specificity kinase, DYRK1A, as a potential therapeutic target for head and neck squamous cell carcinoma.

    Published in:
    Scientific Reports, 2016, p. 36132, doi. 10.1038/srep36132
    By:
    • Radhakrishnan, Aneesha;
    • Nanjappa, Vishalakshi;
    • Raja, Remya;
    • Sathe, Gajanan;
    • Puttamallesh, Vinuth N.;
    • Jain, Ankit P.;
    • Pinto, Sneha M.;
    • Balaji, Sai A.;
    • Chavan, Sandip;
    • Sahasrabuddhe, Nandini A.;
    • Mathur, Premendu P.;
    • Kumar, Mahesh M.;
    • Prasad, T. S. Keshava;
    • Santosh, Vani;
    • Sukumar, Geethanjali;
    • Califano, Joseph A.;
    • Rangarajan, Annapoorni;
    • Sidransky, David;
    • Pandey, Akhilesh;
    • Gowda, Harsha
    Publication type:
    Article

  • Plasma Proteome Database as a resource for proteomics research: 2014 update.

    Published in:
    Nucleic Acids Research, 2014, v. 42, n. D1, p. D959, doi. 10.1093/nar/gkt1251
    By:
    • Nanjappa, Vishalakshi;
    • Thomas, Joji Kurian;
    • Marimuthu, Arivusudar;
    • Muthusamy, Babylakshmi;
    • Radhakrishnan, Aneesha;
    • Sharma, Rakesh;
    • Ahmad Khan, Aafaque;
    • Balakrishnan, Lavanya;
    • Sahasrabuddhe, Nandini A.;
    • Kumar, Satwant;
    • Jhaveri, Binit Nitinbhai;
    • Sheth, Kaushal Vinaykumar;
    • Kumar Khatana, Ramesh;
    • Shaw, Patrick G.;
    • Srikanth, Srinivas Manda;
    • Mathur, Premendu P.;
    • Shankar, Subramanian;
    • Nagaraja, Dindagur;
    • Christopher, Rita;
    • Mathivanan, Suresh
    Publication type:
    Article

  • Macrophage migration inhibitory factor - a therapeutic target in gallbladder cancer.

    Published in:
    2015
    By:
    • Subbannayya, Tejaswini;
    • Leal-Rojas, Pamela;
    • Barbhuiya, Mustafa A.;
    • Raja, Remya;
    • Renuse, Santosh;
    • Sathe, Gajanan;
    • Pinto, Sneha M.;
    • Syed, Nazia;
    • Nanjappa, Vishalakshi;
    • Patil, Arun H.;
    • Garcia, Patricia;
    • Sahasrabuddhe, Nandini A.;
    • Nair, Bipin;
    • Guerrero-Preston, Rafael;
    • Navani, Sanjay;
    • Tiwari, Pramod K.;
    • Santosh, Vani;
    • Sidransky, David;
    • Prasad, T. S. Keshava;
    • Gowda, Harsha
    Publication type:
    journal article

  • NGS-based profiling of key cancer genes in Indian triple-negative breast cancer patients reinforces molecular heterogeneity of the disease.

    Published in:
    2021
    By:
    • Sahasrabuddhe, Nandini A.;
    • Korlimarla, Aruna;
    • Kulkarni, Madhura;
    • Kusuma, Vinay;
    • Prabhu, Jyothi S.;
    • Dixit, Santosh;
    • Deshmukh, Chetan;
    • Sridhar, T. S.;
    • Phatak, Aditya;
    • Koppiker, Chaitanyananda
    Publication type:
    case study

  • SILAC-based quantitative proteomic analysis of gastric cancer secretome.

    Published in:
    Proteomics - Clinical Applications, 2013, v. 7, n. 5/6, p. 355, doi. 10.1002/prca.201200069
    By:
    • Marimuthu, Arivusudar;
    • Subbannayya, Yashwanth;
    • Sahasrabuddhe, Nandini A.;
    • Balakrishnan, Lavanya;
    • Syed, Nazia;
    • Sekhar, Nirujogi Raja;
    • Katte, Teesta V.;
    • Pinto, Sneha M.;
    • Srikanth, Srinivas M.;
    • Kumar, Praveen;
    • Pawar, Harsh;
    • Kashyap, Manoj K.;
    • Maharudraiah, Jagadeesha;
    • Ashktorab, Hassan;
    • Smoot, Duane T.;
    • Ramaswamy, Girija;
    • Kumar, Rekha V.;
    • Cheng, Yulan;
    • Meltzer, Stephen J.;
    • Roa, Juan Carlos
    Publication type:
    Article