Works matching AU Sadanandam, Anguraj

Results: 27

A Machine-Learning Tool Concurrently Models Single Omics and Phenome Data for Functional Subtyping and Personalized Cancer Medicine.

Published in:

Cancers, 2020, v. 12, n. 10, p. 2811, doi. 10.3390/cancers12102811

By:

Nyamundanda, Gift;
Eason, Katherine;
Guinney, Justin;
Lord, Christopher J.;
Sadanandam, Anguraj

Publication type:

Article

The clinical terrain of immunotherapies in heterogeneous pancreatic cancer: unravelling challenges and opportunities.

Published in:

Journal of Pathology, 2023, v. 260, n. 5, p. 533, doi. 10.1002/path.6171

By:

Herpels, Melanie;
Ishihara, Jun;
Sadanandam, Anguraj

Publication type:

Article

Current State of "Omics" Biomarkers in Pancreatic Cancer.

Published in:

Journal of Personalized Medicine, 2021, v. 11, n. 2, p. 127, doi. 10.3390/jpm11020127

By:

Turanli, Beste;
Yildirim, Esra;
Gulfidan, Gizem;
Arga, Kazim Yalcin;
Sinha, Raghu;
Sadanandam, Anguraj

Publication type:

Article

Breast Cancer Type Classification Using Machine Learning.

Published in:

Journal of Personalized Medicine, 2021, v. 11, n. 2, p. 61, doi. 10.3390/jpm11020061

By:

Wu, Jiande;
Hicks, Chindo;
Sadanandam, Anguraj

Publication type:

Article

Microenvironmental niche divergence shapes BRCA1-dysregulated ovarian cancer morphological plasticity.

Published in:

Nature Communications, 2018, v. 9, n. 1, p. 1, doi. 10.1038/s41467-018-06130-3

By:

Heindl, Andreas;
Khan, Adnan Mujahid;
Rodrigues, Daniel Nava;
Eason, Katherine;
Sadanandam, Anguraj;
Orbegoso, Cecilia;
Punta, Marco;
Sottoriva, Andrea;
Lise, Stefano;
Banerjee, Susana;
Yuan, Yinyin

Publication type:

Article

Inter‐ and intra‐tumoural heterogeneity in cancer‐associated fibroblasts of human pancreatic ductal adenocarcinoma.

Published in:

Journal of Pathology, 2019, v. 248, n. 1, p. 51, doi. 10.1002/path.5224

By:

Neuzillet, Cindy;
Tijeras‐Raballand, Annemilaï;
Ragulan, Chanthirika;
Cros, Jérôme;
Patil, Yatish;
Martinet, Matthieu;
Erkan, Mert;
Kleeff, Jörg;
Wilson, Jeremy;
Apte, Minoti;
Tosolini, Marie;
Wilson, Abigail S;
Delvecchio, Francesca R;
Bousquet, Corinne;
Paradis, Valérie;
Hammel, Pascal;
Sadanandam, Anguraj;
Kocher, Hemant M

Publication type:

Article

Enhanced expression and shedding of receptor activator of NF-κB ligand during tumor–bone interaction potentiates mammary tumor-induced osteolysis.

Published in:

Clinical & Experimental Metastasis, 2009, v. 26, n. 7, p. 797, doi. 10.1007/s10585-009-9279-2

By:

Nannuru, Kalyan;
Futakuchi, Mitsuru;
Sadanandam, Anguraj;
Wilson, Thomas;
Varney, Michelle;
Myers, Kathleen;
Li, Xiaodong;
Marcusson, Eric;
Singh, Rakesh

Publication type:

Article

A Case Report on Longitudinal Collection of Tumour Biopsies for Gene Expression-Based Tumour Microenvironment Analysis from Pancreatic Cancer Patients Treated with Endoscopic Ultrasound Guided Radiofrequency Ablation.

Published in:

2022

By:

Lawrence, Patrick V.;
Desai, Krisha;
Wadsworth, Christopher;
Mangal, Nagina;
Kocher, Hemant M.;
Habib, Nagy;
Sadanandam, Anguraj;
Sodergren, Mikael H.

Publication type:

Case Study

polyClustR: defining communities of reconciled cancer subtypes with biological and prognostic significance.

Published in:

BMC Bioinformatics, 2018, v. 19, n. 1, p. 1, doi. 10.1186/s12859-018-2204-4

By:

Eason, Katherine;
Nyamundanda, Gift;
Sadanandam, Anguraj

Publication type:

Article

Heterocellular gene signatures reveal luminal-A breast cancer heterogeneity and differential therapeutic responses.

Published in:

NPJ Breast Cancer, 2019, v. 5, n. 1, p. N.PAG, doi. 10.1038/s41523-019-0116-8

By:

Poudel, Pawan;
Nyamundanda, Gift;
Patil, Yatish;
Cheang, Maggie Chon U;
Sadanandam, Anguraj

Publication type:

Article

Reply to Colorectal cancer classification based on gene expression is not associated with FOLFIRI response.

Published in:

Nature Medicine, 2014, v. 20, n. 11, p. 1231, doi. 10.1038/nm.3742

By:

Sadanandam, Anguraj;
Gray, Joe;
Hanahan, Douglas

Publication type:

Article

A colorectal cancer classification system that associates cellular phenotype and responses to therapy.

Published in:

Nature Medicine, 2013, v. 19, n. 5, p. 619, doi. 10.1038/nm.3175

By:

Sadanandam, Anguraj;
Lyssiotis, Costas A;
Homicsko, Krisztian;
Collisson, Eric A;
Gibb, William J;
Wullschleger, Stephan;
Ostos, Liliane C Gonzalez;
Lannon, William A;
Grotzinger, Carsten;
Del Rio, Maguy;
Lhermitte, Benoit;
Olshen, Adam B;
Wiedenmann, Bertram;
Cantley, Lewis C;
Gray, Joe W;
Hanahan, Douglas

Publication type:

Article

Subtypes of pancreatic ductal adenocarcinoma and their differing responses to therapy.

Published in:

Nature Medicine, 2011, v. 17, n. 4, p. 500, doi. 10.1038/nm.2344

By:

Collisson, Eric A.;
Sadanandam, Anguraj;
Olson, Peter;
Gibb, William J.;
Truitt, Morgan;
Gu, Shenda;
Cooc, Janine;
Weinkle, Jennifer;
Kim, Grace E.;
Jakkula, Lakshmi;
Feiler, Heidi S.;
Ko, Andrew H.;
Olshen, Adam B.;
Danenberg, Kathleen L.;
Tempero, Margaret A.;
Spellman, Paul T.;
Hanahan, Douglas;
Gray, Joe W.

Publication type:

Article

Transforming growth factor-β signaling at the tumor–bone interface promotes mammary tumor growth and osteoclast activation.

Published in:

Cancer Science, 2009, v. 100, n. 1, p. 71, doi. 10.1111/j.1349-7006.2008.01012.x

By:

Futakuchi, Mitsuru;
Nannuru, Kalyan C.;
Varney, Michelle L.;
Sadanandam, Anguraj;
Nakao, Kimihisa;
Asai, Kiyofumi;
Shirai, Tomoyuki;
Sato, Shin-ya;
Singh, Rakesh K.

Publication type:

Article

A blood transcriptome-based analysis of disease progression, immune regulation, and symptoms in coronavirus-infected patients.

Published in:

Cell Death Discovery, 2020, v. 6, n. 1, p. 1, doi. 10.1038/s41420-020-00376-x

By:

Sadanandam, Anguraj;
Bopp, Tobias;
Dixit, Santosh;
Knapp, David J. H. F.;
Emperumal, Chitra Priya;
Vergidis, Paschalis;
Rajalingam, Krishnaraj;
Melcher, Alan;
Kannan, Nagarajan

Publication type:

Article

T-cell receptor determinants of response to chemoradiation in locally-advanced HPV16-driven malignancies.

Published in:

Frontiers in Oncology, 2024, p. 1, doi. 10.3389/fonc.2023.1296948

By:

Nenclares, Pablo;
Larkeryd, Adrian;
Manodoro, Floriana;
Lee, Jen Y.;
Lalondrelle, Susan;
Gilbert, Duncan C.;
Punta, Marco;
O'Leary, Ben;
Rullan, Antonio;
Sadanandam, Anguraj;
Chain, Benny;
Melcher, Alan;
Harrington, Kevin J.;
Bhide, Shreerang A.

Publication type:

Article

Prediction of epigenetically regulated genes inbreast cancer cell lines.

Published in:

BMC Bioinformatics, 2010, v. 11, p. 305, doi. 10.1186/1471-2105-11-305

By:

Loss, Leandro A.;
Sadanandam, Anguraj;
Durinck, Steffen;
Nautiyal, Shivani;
Flaucher, Diane;
Carlton, Victoria E. H.;
Moorhead, Martin;
Yontao Lu;
Gray, Joe W.;
Faham, Malek;
Spellman, Paul;
Parvin, Bahram

Publication type:

Article

Chemokines in tumor angiogenesis and metastasis.

Published in:

Cancer & Metastasis Reviews, 2007, v. 26, n. 3/4, p. 453, doi. 10.1007/s10555-007-9068-9

By:

Seema Singh;
Anguraj Sadanandam;
Rakesh Singh

Publication type:

Article

A rectal cancer feasibility study with an embedded phase III trial design assessing magnetic resonance tumour regression grade (mrTRG) as a novel biomarker to stratify management by good and poor response to chemoradiotherapy (TRIGGER): study protocol for a randomised controlled trial.

Published in:

2017

By:

Battersby, Nick J.;
Dattani, Mit;
Rao, Sheela;
Cunningham, David;
Tait, Diana;
Adams, Richard;
Moran, Brendan J.;
Khakoo, Shelize;
Tekkis, Paris;
Rasheed, Shahnawaz;
Mirnezami, Alex;
Quirke, Philip;
West, Nicholas P.;
Nagtegaal, Iris;
Chong, Irene;
Sadanandam, Anguraj;
Valeri, Nicola;
Thomas1, Karen;
Frost, Michelle;
Brown, Gina

Publication type:

journal article

DNA methylation patterns identify subgroups of pancreatic neuroendocrine tumors with clinical association.

Published in:

Communications Biology, 2021, v. 4, n. 1, p. 1, doi. 10.1038/s42003-020-01469-0

By:

Lakis, Vanessa;
Lawlor, Rita T.;
Newell, Felicity;
Patch, Ann-Marie;
Mafficini, Andrea;
Sadanandam, Anguraj;
Koufariotis, Lambros T.;
Johnston, Rebecca L.;
Leonard, Conrad;
Wood, Scott;
Rusev, Borislav;
Corbo, Vincenzo;
Luchini, Claudio;
Cingarlini, Sara;
Landoni, Luca;
Salvia, Roberto;
Milella, Michele;
Chang, David;
Bailey, Peter;
Jamieson, Nigel B.

Publication type:

Article

High gene expression of semaphorin 5A in pancreatic cancer is associated with tumor growth, invasion and metastasis.

Published in:

International Journal of Cancer, 2010, v. 127, n. 6, p. 1373, doi. 10.1002/ijc.25166

By:

Sadanandam, Anguraj;
Varney, Michelle L.;
Singh, Seema;
Ashour, Abdelkader E.;
Moniaux, Nicolas;
Deb, Shonali;
Lele, Subodh M.;
Batra, Surinder K.;
Singh, Rakesh K.

Publication type:

Article

Small interfering RNA-mediated CXCR1 or CXCR2 knock-down inhibits melanoma tumor growth and invasion.

Published in:

International Journal of Cancer, 2010, v. 126, n. 2, p. 328, doi. 10.1002/ijc.24714

By:

Singh, Seema;
Sadanandam, Anguraj;
Varney, Michelle L.;
Nannuru, Kalyan C.;
Singh, Rakesh K.

Publication type:

Article

Identification and Characterization of Poorly Differentiated Invasive Carcinomas in a Mouse Model of Pancreatic Neuroendocrine Tumorigenesis

Published in:

PLoS ONE, 2013, v. 8, n. 5, p. 1, doi. 10.1371/journal.pone.0064472

By:

Hunter, Karen E.;
Quick, Marsha L.;
Sadanandam, Anguraj;
Hanahan, Douglas;
Joyce, Johanna A.

Publication type:

Article

MCAM: A Database to Accelerate the Identification of Functional Cell Adhesion Molecules.

Published in:

Cancer Informatics, 2008, n. 6, p. 47, doi. 10.4137/CIN.S341

By:

Sadanandam, Anguraj;
Pal, Sudipendra Nath;
Ziskovsky, Joe;
Hegde, Prathibha;
Singh, Rakesh K.

Publication type:

Article

Genomic aberrations in normal tissue adjacent to HER2-amplified breast cancers: field cancerization or contaminating tumor cells?

Published in:

Breast Cancer Research & Treatment, 2012, v. 136, n. 3, p. 693, doi. 10.1007/s10549-012-2290-3

By:

Sadanandam, Anguraj;
Lal, Aseem;
Benz, Stephen;
Eppenberger-Castori, Serenella;
Scott, Gary;
Gray, Joe;
Spellman, Paul;
Waldman, Fred;
Benz, Christopher

Publication type:

Article

Cannabinoids in the landscape of cancer.

Published in:

Journal of Cancer Research & Clinical Oncology, 2021, v. 147, n. 9, p. 2507, doi. 10.1007/s00432-021-03710-7

By:

Mangal, Nagina;
Erridge, Simon;
Habib, Nagy;
Sadanandam, Anguraj;
Reebye, Vikash;
Sodergren, Mikael Hans

Publication type:

Article

Reconciliation of classification systems defining molecular subtypes of colorectal cancer.

Published in:

Cell Cycle, 2014, v. 13, n. 3, p. 353, doi. 10.4161/cc.27769

By:

Sadanandam, Anguraj;
Xin Wang;
de Sousa E. Melo, Felipe;
Gray, Joe W.;
Vermeulen, Louis;
Hanahan, Douglas;
Medema, Jan Paul

Publication type:

Article