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Including marker x environment interactions improves genomic prediction in red clover (Trifolium pratense L.).
- Published in:
- Frontiers in Plant Science, 2024, p. 1, doi. 10.3389/fpls.2024.1407609
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- Article
Crop-to-wild gene flow in wild coffee species: the case of Coffea canephora in the Democratic Republic of the Congo.
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- Annals of Botany, 2024, v. 133, n. 7, p. 917, doi. 10.1093/aob/mcae034
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- Article
Sensory profiles of Robusta coffee (Coffea canephora) genetic resources from the Democratic Republic of the Congo.
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- Frontiers in Sustainable Food Systems, 2024, p. 1, doi. 10.3389/fsufs.2024.1382976
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- Article
Nematodes alter the taxonomic and functional profiles of benthic bacterial communities: A metatranscriptomic approach.
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- Molecular Ecology, 2024, v. 33, n. 9, p. 1, doi. 10.1111/mec.17331
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- Article
Haitian coffee agroforestry systems harbor complex arabica variety mixtures and under-recognized genetic diversity.
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- PLoS ONE, 2024, v. 19, n. 4, p. 1, doi. 10.1371/journal.pone.0299493
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- Article
Detection and quantification of two commercial flatfishes (Solea solea and Pleuronectes platessa) in the North Sea using environmental DNA.
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- Environmental DNA, 2024, v. 6, n. 1, p. 1, doi. 10.1002/edn3.426
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- Article
Combining multiplex gene editing and doubled haploid technology in maize.
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- New Phytologist, 2023, v. 239, n. 4, p. 1521, doi. 10.1111/nph.19021
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Genome-wide genotyping data renew knowledge on genetic diversity of a worldwide alfalfa collection and give insights on genetic control of phenology traits.
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- Frontiers in Plant Science, 2023, p. 1, doi. 10.3389/fpls.2023.1196134
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- Article
Identification and characterization of CYP71 subclade cytochrome P450 enzymes involved in the biosynthesis of bitterness compounds in Cichorium intybus.
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- Frontiers in Plant Science, 2023, p. 1, doi. 10.3389/fpls.2023.1200253
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- Article
Industrial chicory genome gives insights into the molecular timetable of anther development and male sterility.
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- Frontiers in Plant Science, 2023, p. 1, doi. 10.3389/fpls.2023.1181529
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- Article
A genome-wide association study of freezing tolerance in red clover (Trifolium pratense L.) germplasm of European origin.
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- Frontiers in Plant Science, 2023, p. 1, doi. 10.3389/fpls.2023.1189662
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- Article
Genetic composition and diversity of Arabica coffee in the crop's centre of origin and its impact on four major fungal diseases.
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- Molecular Ecology, 2023, v. 32, n. 10, p. 2484, doi. 10.1111/mec.16458
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- Article
SMAP design: a multiplex PCR amplicon and gRNA design tool to screen for natural and CRISPR-induced genetic variation.
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- Nucleic Acids Research, 2023, v. 51, n. 7, p. e37, doi. 10.1093/nar/gkad036
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- Article
Exploring Genetic Diversity in an Ilex crenata Breeding Germplasm.
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- Horticulturae, 2023, v. 9, n. 4, p. 485, doi. 10.3390/horticulturae9040485
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- Article
Multi-location trials and population-based genotyping reveal high diversity and adaptation to breeding environments in a large collection of red clover.
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- Frontiers in Plant Science, 2023, v. 14, p. 01, doi. 10.3389/fpls.2023.1128823
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- Article
BREEDIT: a multiplex genome editing strategy to improve complex quantitative traits in maize.
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- Plant Cell, 2023, v. 35, n. 1, p. 218, doi. 10.1093/plcell/koac243
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- Article
Phenotypic variation and quantitative trait loci for resistance to southern anthracnose and clover rot in red clover.
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- Theoretical & Applied Genetics, 2022, v. 135, n. 12, p. 4337, doi. 10.1007/s00122-022-04223-8
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- Article
Identification of loci controlling timing of stem elongation in red clover using genotyping by sequencing of pooled phenotypic extremes.
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- Molecular Genetics & Genomics, 2022, v. 297, n. 6, p. 1587, doi. 10.1007/s00438-022-01942-x
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- Article
PotatoMASH—A Low Cost, Genome-Scanning Marker System for Use in Potato Genomics and Genetics Applications.
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- Agronomy, 2022, v. 12, n. 10, p. N.PAG, doi. 10.3390/agronomy12102461
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- Article
Covering the Combinatorial Design Space of Multiplex CRISPR/Cas Experiments in Plants.
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- Frontiers in Plant Science, 2022, v. 13, p. 1, doi. 10.3389/fpls.2022.907095
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- Article
Seasonal Differences in Structural and Genetic Control of Digestibility in Perennial Ryegrass.
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- Frontiers in Plant Science, 2022, v. 13, p. 1, doi. 10.3389/fpls.2021.801145
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- Article
Phylogenomic analysis clarifies the evolutionary origin of Coffea arabica.
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- Journal of Systematics & Evolution, 2021, v. 59, n. 5, p. 953, doi. 10.1111/jse.12694
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- Article
Reciprocal allopolyploid grasses (Festuca × Lolium) display stable patterns of genome dominance.
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- Plant Journal, 2021, v. 107, n. 4, p. 1166, doi. 10.1111/tpj.15375
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- Article
Monitoring of spatiotemporal occupancy patterns of fish and amphibian species in a lentic aquatic system using environmental DNA.
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- Molecular Ecology, 2021, v. 30, n. 13, p. 3097, doi. 10.1111/mec.15742
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- Article
To grow or survive: Which are the strategies of a perennial grass to face severe seasonal stress?
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- Functional Ecology, 2021, v. 35, n. 5, p. 1145, doi. 10.1111/1365-2435.13770
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- Article
Canonical correlations reveal adaptive loci and phenotypic responses to climate in perennial ryegrass.
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- Molecular Ecology Resources, 2021, v. 21, n. 3, p. 849, doi. 10.1111/1755-0998.13289
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- Article
A Genome-Wide Genetic Diversity Scan Reveals Multiple Signatures of Selection in a European Soybean Collection Compared to Chinese Collections of Wild and Cultivated Soybean Accessions.
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- Frontiers in Plant Science, 2021, v. 11, p. N.PAG, doi. 10.3389/fpls.2021.631767
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- Article
High-throughput genome-wide genotyping to optimize the use of natural genetic resources in the grassland species perennial ryegrass (Lolium perenne L.).
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- G3: Genes | Genomes | Genetics, 2020, v. 10, n. 9, p. 1, doi. 10.1534/g3.120.401491
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- Article
Whole-Genome Deep Sequencing Reveals Host-Driven in-planta Evolution of Columnea Latent Viroid (CLVd) Quasi-Species Populations.
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- International Journal of Molecular Sciences, 2020, v. 21, n. 9, p. 3262, doi. 10.3390/ijms21093262
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- Article
Population genomic structure of the gelatinous zooplankton species Mnemiopsis leidyi in its nonindigenous range in the North Sea.
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- Ecology & Evolution (20457758), 2020, v. 10, n. 1, p. 11, doi. 10.1002/ece3.5468
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- Article
Utilization of Tissue Ploidy Level Variation in de Novo Transcriptome Assembly of Pinus sylvestris.
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- G3: Genes | Genomes | Genetics, 2019, v. 9, n. 10, p. 3409, doi. 10.1534/g3.119.400357
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- Article
Identification and assessment of variable single-copy orthologous (SCO) nuclear loci for low-level phylogenomics: a case study in the genus Rosa (Rosaceae).
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- BMC Evolutionary Biology, 2019, v. 19, n. 1, p. N.PAG, doi. 10.1186/s12862-019-1479-z
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- Article
Cichorium intybus L. × Cicerbita alpina Walbr.: doubled haploid chicory induction and CENH3 characterization.
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- Euphytica, 2019, v. 215, n. 7, p. N.PAG, doi. 10.1007/s10681-019-2435-0
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Pleistocene climate changes, and not agricultural spread, accounts for range expansion and admixture in the dominant grassland species Lolium perenne L.
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- Journal of Biogeography, 2019, v. 46, n. 7, p. 1451, doi. 10.1111/jbi.13587
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Overcoming challenges in variant calling: exploring sequence diversity in candidate genes for plant development in perennial ryegrass (Lolium perenne).
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- DNA Research, 2019, v. 26, n. 1, p. 1, doi. 10.1093/dnares/dsy033
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Temporal changes in genetic diversity and forage yield of perennial ryegrass in monoculture and in combination with red clover in swards.
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- PLoS ONE, 2018, v. 13, n. 11, p. 1, doi. 10.1371/journal.pone.0206571
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- Article
Are We There Yet? Reliably Estimating the Completeness of Plant Genome Sequences.
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- Plant Cell, 2016, v. 28, n. 8, p. 1759, doi. 10.1105/tpc.16.00349
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- Article
High-throughput phenotyping of lateral expansion and regrowth of spaced Lolium perenne plants using on-field image analysis.
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- Plant Methods, 2016, v. 12, p. 1, doi. 10.1186/s13007-016-0132-8
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- Article
De novo assembly of red clover transcriptome based on RNA-Seq data provides insight into drought response, gene discovery and marker identification.
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- BMC Genomics, 2014, v. 15, n. 1, p. 1, doi. 10.1186/1471-2164-15-453
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- Article
Orthology Guided Assembly in highly heterozygous crops: creating a reference transcriptome to uncover genetic diversity in Lolium perenne.
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- Plant Biotechnology Journal, 2013, v. 11, n. 5, p. 605, doi. 10.1111/pbi.12051
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- Article
Bud set in poplar - genetic dissection of a complex trait in natural and hybrid populations.
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- New Phytologist, 2011, v. 189, n. 1, p. 106, doi. 10.1111/j.1469-8137.2010.03469.x
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- Article
Knowledge-technology-based discovery of unauthorized genetically modified organisms.
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- Analytical & Bioanalytical Chemistry, 2010, v. 396, n. 6, p. 1951, doi. 10.1007/s00216-009-3218-6
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Molecular toolbox for the identification of unknown genetically modified organisms.
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- Analytical & Bioanalytical Chemistry, 2010, v. 396, n. 6, p. 2073, doi. 10.1007/s00216-009-3287-6
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Gene expression during the induction, maintenance, and release of dormancy in apical buds of poplar.
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- Journal of Experimental Botany, 2007, v. 58, n. 15/16, p. 4047, doi. 10.1093/jxb/erm261
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- Article
ENOD40 affects elongation growth in tobacco Bright Yellow-2 cells by alteration of ethylene biosynthesis kinetics.
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- Journal of Experimental Botany, 2006, v. 57, n. 12, p. 3271, doi. 10.1093/jxb/erl089
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- Article
Regulation of Growth, Development and Whole Organism Physiology. Quantitative NMR microscopy of osmotic stress responses in maize and pearl millet.
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- Journal of Experimental Botany, 2001, v. 52, n. 365, p. 2333, doi. 10.1093/jexbot/52.365.2333
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Cell and Molecular Biology, Biochemistry and Molecular Physiology. Characterization of position-induced spatial and temporal regulation of transgene promoter activity in plants.
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- Journal of Experimental Botany, 2001, v. 52, n. 358, p. 949, doi. 10.1093/jexbot/52.358.949
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- Article
The Use of the Luciferase Reporter System for in Planta Gene Expression Studies.
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- Plant Molecular Biology Reporter, 2000, v. 18, n. 2, p. 143, doi. 10.1007/BF02824024
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- Article