Works by Ruby, Edward G.

Results: 35

Confocal microscopy of the light organ crypts in juvenile Euprymna scolopes reveals their morphological complexity and dynamic function in symbiosis.

Published in:

Journal of Morphology, 2006, v. 267, n. 5, p. 555, doi. 10.1002/jmor.10422

By:

Laura K. Sycuro;
Edward G. Ruby;
Margaret McFall‐Ngai

Publication type:

Article

Evidence of Genomic Diversification in a Natural Symbiotic Population Within Its Host.

Published in:

Frontiers in Microbiology, 2022, v. 13, p. 1, doi. 10.3389/fmicb.2022.854355

By:

Bongrand, Clotilde;
Koch, Eric;
Mende, Daniel;
Romano, Anna;
Lawhorn, Susannah;
McFall-Ngai, Margaret;
DeLong, Edward F.;
Ruby, Edward G.

Publication type:

Article

Tracking the cargo of extracellular symbionts into host tissues with correlated electron microscopy and nanoscale secondary ion mass spectrometry imaging.

Published in:

Cellular Microbiology, 2020, v. 22, n. 4, p. 1, doi. 10.1111/cmi.13177

By:

Cohen, Stephanie K.;
Aschtgen, Marie‐Stéphanie;
Lynch, Jonathan B.;
Koehler, Sabrina;
Chen, Fangmin;
Escrig, Stéphane;
Daraspe, Jean;
Ruby, Edward G.;
Meibom, Anders;
McFall‐Ngai, Margaret

Publication type:

Article

The roles of NO in microbial symbioses.

Published in:

Cellular Microbiology, 2011, v. 13, n. 4, p. 518, doi. 10.1111/j.1462-5822.2011.01576.x

By:

Wang, Yanling;
Ruby, Edward G.

Publication type:

Article

The GacA global regulator of Vibrio fischeri is required for normal host tissue responses that limit subsequent bacterial colonization.

Published in:

Cellular Microbiology, 2007, v. 9, n. 3, p. 766, doi. 10.1111/j.1462-5822.2006.00826.x

By:

Whistler, Cheryl A.;
Koropatnick, Tanya A.;
Pollack, Amber;
McFall-Ngai, Margaret J.;
Ruby, Edward G.

Publication type:

Article

The noncoding small RNA SsrA is released by Vibrio fischeri and modulates critical host responses.

Published in:

PLoS Biology, 2020, v. 18, n. 11, p. N.PAG, doi. 10.1371/journal.pbio.3000934

By:

Moriano-Gutierrez, Silvia;
Bongrand, Clotilde;
Essock-Burns, Tara;
Wu, Leo;
McFall-Ngai, Margaret J.;
Ruby, Edward G.

Publication type:

Article

The putative oligosaccharide translocase SypK connects biofilm formation with quorum signaling in Vibrio fischeri.

Published in:

MicrobiologyOpen, 2014, v. 3, n. 6, p. 836, doi. 10.1002/mbo3.199

By:

Miyashiro, Tim;
Oehlert, Dane;
Ray, Valerie A.;
Visick, Karen L.;
Ruby, Edward G.

Publication type:

Article

A single regulatory gene is sufficient to alter bacterial host range.

Published in:

2009

By:

Mandel, Mark J.;
Wollenberg, Michael S.;
Stabb, Eric V.;
Visick, Karen L.;
Ruby, Edward G.

Publication type:

Letter

An acidic microenvironment produced by the V-type ATPase of Euprymna scolopes promotes specificity during Vibrio fischeri recruitment.

Published in:

Communications Biology, 2024, v. 7, n. 1, p. 1, doi. 10.1038/s42003-024-07348-2

By:

Hargadon, Alexis C.;
Viliunas, Joani W.;
Koehler, Sabrina;
Thies, Angus B.;
Chen, Grischa Y.;
Ladinsky, Mark S.;
Kuwabara, Jill;
Avila-Magana, Viridiana;
Ruby, Edward G.;
Tresguerres, Martin;
McFall-Ngai, Margaret J.

Publication type:

Article

The Vibrio fischeri quorum-sensing systems ain and lux sequentially induce luminescence gene expression and are important for persistence in the squid host.

Published in:

Molecular Microbiology, 2003, v. 50, n. 1, p. 319, doi. 10.1046/j.1365-2958.2003.t01-1-03585.x

By:

Lupp, Claudia;
Urbanowski, Mark;
Greenberg, E. Peter;
Ruby, Edward G.

Publication type:

Article

LuxO controls luxR expression in Vibrio harveyi: evidence for a common regulatory mechanism in Vibrio.

Published in:

Molecular Microbiology, 2003, v. 48, n. 2, p. 537, doi. 10.1046/j.1365-2958.2003.03453.x

By:

Miyamoto, Carol M.;
Dunlap, Paul V.;
Ruby, Edward G.;
Meighen, Edward A.

Publication type:

Article

LitR, a new transcriptional activator in Vibrio fischeri , regulates luminescence and symbiotic light organ colonization.

Published in:

Molecular Microbiology, 2002, v. 45, n. 1, p. 131, doi. 10.1046/j.1365-2958.2002.02996.x

By:

Fidopiastis, Pat M.;
Miyamoto, Carol M.;
Jobling, Michael G.;
Meighen, Edward A.;
Ruby, Edward G.

Publication type:

Article

Phylogeny and fitness of Vibrio fischeri from the light organs of Euprymna scolopes in two Oahu, Hawaii populations.

Published in:

ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2012, v. 6, n. 2, p. 352, doi. 10.1038/ismej.2011.92

By:

Wollenberg, Michael S;
Ruby, Edward G

Publication type:

Article

Shedding light on bioluminescence regulation in Vibrio fischeri.

Published in:

Molecular Microbiology, 2012, v. 84, n. 5, p. 795, doi. 10.1111/j.1365-2958.2012.08065.x

By:

Miyashiro, Tim;
Ruby, Edward G.

Publication type:

Article

The N-acetyl- d-glucosamine repressor NagC of Vibrio fischeri facilitates colonization of Euprymna scolopes.

Published in:

Molecular Microbiology, 2011, v. 82, n. 4, p. 894, doi. 10.1111/j.1365-2958.2011.07858.x

By:

Miyashiro, Tim;
Klein, Will;
Oehlert, Dane;
Cao, Xiaodan;
Schwartzman, Julia;
Ruby, Edward G.

Publication type:

Article

Vibrio fischeri flavohaemoglobin protects against nitric oxide during initiation of the squid- Vibrio symbiosis Y. Wang et al. V. fischeri NO protection in symbiosis.

Published in:

Molecular Microbiology, 2010, v. 78, n. 4, p. 903, doi. 10.1111/j.1365-2958.2010.07376.x

By:

Yanling Wang;
Dunn, Anne K.;
Wilneff, Jacqueline;
McFall-Ngai, Margaret J.;
Spiro, Stephen;
Ruby, Edward G.

Publication type:

Article

A single qrr gene is necessary and sufficient for LuxO-mediated regulation in Vibrio fischeri.

Published in:

Molecular Microbiology, 2010, v. 77, n. 6, p. 1556, doi. 10.1111/j.1365-2958.2010.07309.x

By:

Miyashiro, Tim;
Wollenberg, Michael S.;
Xiaodan Cao;
Oehlert, Dane;
Ruby, Edward G.

Publication type:

Article

The alternative oxidase (AOX) gene in Vibrio fischeri is controlled by NsrR and upregulated in response to nitric oxide.

Published in:

Molecular Microbiology, 2010, v. 77, n. 1, p. 44, doi. 10.1111/j.1365-2958.2010.07194.x

By:

Dunn, Anne K.;
Karr, Elizabeth A.;
Wang, Yanling;
Batton, Aaron R.;
Ruby, Edward G.;
Stabb, Eric V.

Publication type:

Article

Features governing symbiont persistence in the squid-vibrio association.

Published in:

Molecular Ecology, 2014, v. 23, n. 6, p. 1624, doi. 10.1111/mec.12474

By:

Koch, Eric J.;
Miyashiro, Tim;
McFall‐Ngai, Margaret J.;
Ruby, Edward G.

Publication type:

Article

Maturation state of colonization sites promotes symbiotic resiliency in the Euprymna scolopes-Vibrio fischeri partnership.

Published in:

Microbiome, 2023, v. 11, n. 1, p. 1, doi. 10.1186/s40168-023-01509-x

By:

Essock-Burns, Tara;
Lawhorn, Susannah;
Wu, Leo;
McClosky, Sawyer;
Moriano-Gutierrez, Silvia;
Ruby, Edward G.;
McFall-Ngai, Margaret J.

Publication type:

Article

Acidic pH promotes lipopolysaccharide modification and alters colonization in a bacteria–animal mutualism.

Published in:

Molecular Microbiology, 2019, v. 112, n. 4, p. 1326, doi. 10.1111/mmi.14365

By:

Schwartzman, Julia A.;
Lynch, Jonathan B.;
Flores Ramos, Stephany;
Zhou, Lawrence;
Apicella, Michael A.;
Yew, Joanne Y.;
Ruby, Edward G.

Publication type:

Article

Sepiolids and vibrios: When first they meet.

Published in:

BioScience, 1998, v. 48, n. 4, p. 257, doi. 10.2307/1313352

By:

McFall-Ngai, Margaret J.;
Ruby, Edward G.

Publication type:

Article

Transcriptional characterization of Vibrio fischeri during colonization of juvenile Euprymna scolopes.

Published in:

Environmental Microbiology, 2017, v. 19, n. 5, p. 1845, doi. 10.1111/1462-2920.13684

By:

Thompson, Luke R.;
Nikolakakis, Kiel;
Pan, Shu;
Reed, Jennifer;
Knight, Rob;
Ruby, Edward G.

Publication type:

Article

Non-native acylated homoserine lactones reveal that LuxIR quorum sensing promotes symbiont stability.

Published in:

Environmental Microbiology, 2014, v. 16, n. 8, p. 2623, doi. 10.1111/1462-2920.12322

By:

Studer, Sarah V.;
Schwartzman, Julia A.;
Ho, Jessica S.;
Geske, Grant D.;
Blackwell, Helen E.;
Ruby, Edward G.

Publication type:

Article

The first engagement of partners in the Euprymna scolopes- Vibrio fischeri symbiosis is a two-step process initiated by a few environmental symbiont cells.

Published in:

Environmental Microbiology, 2013, v. 15, n. 11, p. 2937, doi. 10.1111/1462-2920.12179

By:

Altura, Melissa A.;
Heath ‐ Heckman, Elizabeth A. C.;
Gillette, Amani;
Kremer, Natacha;
Krachler, Anne ‐ Marie;
Brennan, Caitlin;
Ruby, Edward G.;
Orth, Kim;
McFall ‐ Ngai, Margaret J.

Publication type:

Article

The haem-uptake gene cluster in Vibrio fischeri is regulated by Fur and contributes to symbiotic colonization.

Published in:

Environmental Microbiology, 2011, v. 13, n. 11, p. 2855, doi. 10.1111/j.1462-2920.2011.02558.x

By:

Septer, Alecia N.;
Wang, Yanling;
Ruby, Edward G.;
Stabb, Eric V.;
Dunn, Anne K.

Publication type:

Article

Natural transformation of Vibrio fischeri requires tfoX and tfoY.

Published in:

Environmental Microbiology, 2010, v. 12, n. 8, p. 2302, doi. 10.1111/j.1462-2920.2010.02250.x

By:

Pollack-Berti, Amber;
Wollenberg, Michael S.;
Ruby, Edward G.

Publication type:

Article

Recognition between symbiotic Vibrio fischeri and the haemocytes of Euprymna scolopes.

Published in:

Environmental Microbiology, 2009, v. 11, n. 2, p. 483, doi. 10.1111/j.1462-2920.2008.01788.x

By:

Nyholm, Spencer V.;
Stewart, Jennifer J.;
Ruby, Edward G.;
McFall-Ngai, Margaret J.

Publication type:

Article

Symbiotic conversations are revealed under genetic interrogation.

Published in:

Nature Reviews Microbiology, 2008, v. 6, n. 10, p. 752, doi. 10.1038/nrmicro1958

By:

Ruby, Edward G.

Publication type:

Article

Insights into flagellar function and mechanism from the squid–vibrio symbiosis.

Published in:

NPJ Biofilms & Microbiomes, 2019, v. 5, n. 1, p. N.PAG, doi. 10.1038/s41522-019-0106-5

By:

Aschtgen, Marie-Stephanie;
Brennan, Caitlin A.;
Nikolakakis, Kiel;
Cohen, Stephanie;
McFall-Ngai, Margaret;
Ruby, Edward G.

Publication type:

Article

The Vibrio fischeri sapABCDF locus is required for normal growth, both in culture and in symbiosis.

Published in:

Archives of Microbiology, 2003, v. 179, n. 1, p. 57, doi. 10.1007/s00203-002-0502-7

By:

Lupp, Claudia;
Hancock, Robert E.;
Ruby, Edward G.

Publication type:

Article

Comparative genomics-based investigation of resequencing targets in Vibrio fischeri: Focus on point miscalls and artefactual expansions.

Published in:

BMC Genomics, 2008, v. 9, p. 1, doi. 10.1186/1471-2164-9-138

By:

Mandel, Mark J.;
Stabb, Eric V.;
Ruby, Edward G.

Publication type:

Article

Modeled microgravity alters lipopolysaccharide and outer membrane vesicle production of the beneficial symbiont Vibrio fischeri.

Published in:

NPJ Microgravity, 2021, v. 7, n. 1, p. 1, doi. 10.1038/s41526-021-00138-8

By:

Vroom, Madeline M.;
Rodriguez-Ocasio, Yaneli;
Lynch, Jonathan B.;
Ruby, Edward G.;
Foster, Jamie S.

Publication type:

Article

Achieving a multi-strain symbiosis: strain behavior and infection dynamics.

Published in:

ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2019, v. 13, n. 3, p. 698, doi. 10.1038/s41396-018-0305-8

By:

Bongrand, Clotilde;
Ruby, Edward G.

Publication type:

Article

A genomic comparison of 13 symbiotic Vibrio fischeri isolates from the perspective of their host source and colonization behavior.

Published in:

ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2016, v. 10, n. 12, p. 2907, doi. 10.1038/ismej.2016.69

By:

Bongrand, Clotilde;
Koch, Eric J;
Moriano-Gutierrez, Silvia;
Cordero, Otto X;
McFall-Ngai, Margaret;
Polz, Martin F;
Ruby, Edward G

Publication type:

Article