Works by Rokas, Antonis

Results: 144
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    Unique trajectory of gene family evolution from genomic analysis of nearly all known species in an ancient yeast lineage.

    Published in:
    Molecular Systems Biology, 2025, v. 21, n. 8, p. 1066, doi. 10.1038/s44320-025-00118-0
    By:
    • Feng, Bo;
    • Li, Yonglin;
    • Xu, Biyang;
    • Liu, Hongyue;
    • Steenwyk, Jacob L;
    • David, Kyle T;
    • Tian, Xiaolin;
    • Gonçalves, Carla;
    • Opulente, Dana A;
    • LaBella, Abigail L;
    • Harrison, Marie-Claire;
    • Wolters, John F;
    • Shao, Shengyuan;
    • Chen, Zhaohao;
    • Fisher, Kaitlin J;
    • Groenewald, Marizeth;
    • Hittinger, Chris Todd;
    • Shen, Xing-Xing;
    • Li, Shengying;
    • Rokas, Antonis
    Publication type:
    Article
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    PhyloFisher: A phylogenomic package for resolving eukaryotic relationships.

    Published in:
    PLoS Biology, 2021, v. 19, n. 8, p. 1, doi. 10.1371/journal.pbio.3001365
    By:
    • Tice, Alexander K.;
    • Žihala, David;
    • Pánek, Tomáš;
    • Jones, Robert E.;
    • Salomaki, Eric D.;
    • Nenarokov, Serafim;
    • Burki, Fabien;
    • Eliáš, Marek;
    • Eme, Laura;
    • Roger, Andrew J.;
    • Rokas, Antonis;
    • Shen, Xing-Xing;
    • Strassert, Jürgen F. H.;
    • Kolísko, Martin;
    • Brown, Matthew W.
    Publication type:
    Article
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    Strain heterogeneity in a non-pathogenic Aspergillus fungus highlights factors associated with virulence.

    Published in:
    Communications Biology, 2024, v. 7, n. 1, p. 1, doi. 10.1038/s42003-024-06756-8
    By:
    • Rinker, David C.;
    • Sauters, Thomas J. C.;
    • Steffen, Karin;
    • Gumilang, Adiyantara;
    • Raja, Huzefa A.;
    • Rangel-Grimaldo, Manuel;
    • Pinzan, Camila Figueiredo;
    • de Castro, Patrícia Alves;
    • dos Reis, Thaila Fernanda;
    • Delbaje, Endrews;
    • Houbraken, Jos;
    • Goldman, Gustavo H.;
    • Oberlies, Nicholas H.;
    • Rokas, Antonis
    Publication type:
    Article
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    Tracing the Origin and Evolution of the Fungal Mycophenolic Acid Biosynthesis Pathway.

    Published in:
    Genome Biology & Evolution, 2025, v. 17, n. 3, p. 1, doi. 10.1093/gbe/evaf039
    By:
    • Bidon, Baptiste;
    • Yaakoub, Hajar;
    • Lanoue, Arnaud;
    • Géry, Antoine;
    • Séguin, Virginie;
    • Magot, Florent;
    • Hoffmann, Claire;
    • Courdavault, Vincent;
    • Bouchara, Jean-Philippe;
    • Gangneux, Jean-Pierre;
    • Frisvad, Jens C;
    • Rokas, Antonis;
    • Goldman, Gustavo H;
    • Nevez, Gilles;
    • Gal, Solène Le;
    • Davolos, Domenico;
    • Garon, David;
    • Papon, Nicolas
    Publication type:
    Article
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    Regulation of gliotoxin biosynthesis and protection in Aspergillus species.

    Published in:
    PLoS Genetics, 2022, v. 18, n. 1, p. 1, doi. 10.1371/journal.pgen.1009965
    By:
    • de Castro, Patrícia Alves;
    • Colabardini, Ana Cristina;
    • Moraes, Maísa;
    • Horta, Maria Augusta Crivelente;
    • Knowles, Sonja L.;
    • Raja, Huzefa A.;
    • Oberlies, Nicholas H.;
    • Koyama, Yasuji;
    • Ogawa, Masahiro;
    • Gomi, Katsuya;
    • Steenwyk, Jacob L.;
    • Rokas, Antonis;
    • Gonçales, Relber A.;
    • Duarte-Oliveira, Cláudio;
    • Carvalho, Agostinho;
    • Ries, Laure N. A.;
    • Goldman, Gustavo H.
    Publication type:
    Article
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    Fragmentation of an aflatoxin-like gene cluster in a forest pathogen.

    Published in:
    New Phytologist, 2013, v. 198, n. 2, p. 525, doi. 10.1111/nph.12161
    By:
    • Bradshaw, Rosie E.;
    • Slot, Jason C.;
    • Moore, Geromy G.;
    • Chettri, Pranav;
    • Wit, Pierre J. G. M.;
    • Ehrlich, Kenneth C.;
    • Ganley, Austen R. D.;
    • Olson, Malin A.;
    • Rokas, Antonis;
    • Carbone, Ignazio;
    • Cox, Murray P.
    Publication type:
    Article
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    Evolutionary instability of CUG-Leu in the genetic code of budding yeasts.

    Published in:
    Nature Communications, 2018, v. 9, n. 1, p. 1, doi. 10.1038/s41467-018-04374-7
    By:
    • Krassowski, Tadeusz;
    • Coughlan, Aisling Y.;
    • Riley, Robert;
    • Kurtzman, Cletus P.;
    • Xiaofan Zhou;
    • Opulente, Dana A.;
    • Kominek, Jacek;
    • Todd Hittinger, Chris;
    • Grigoriev, Igor V.;
    • Shields, Denis C.;
    • Wolfe, Kenneth H.;
    • Nikunj Maheshwari;
    • Xing-Xing Shen;
    • Rokas, Antonis
    Publication type:
    Article
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    The genome of the choanoflagellate Monosiga brevicollis and the origin of metazoans.

    Published in:
    Nature, 2008, v. 451, n. 7180, p. 783, doi. 10.1038/nature06617
    By:
    • King, Nicole;
    • Westbrook, M. Jody;
    • Young, Susan L.;
    • Kuo, Alan;
    • Abedin, Monika;
    • Chapman, Jarrod;
    • Fairclough, Stephen;
    • Hellsten, Uffe;
    • Isogai, Yoh;
    • Letunic, Ivica;
    • Marr, Michael;
    • Pincus, David;
    • Putnam, Nicholas;
    • Rokas, Antonis;
    • Wright, Kevin J.;
    • Zuzow, Richard;
    • Dirks, William;
    • Good, Matthew;
    • Goodstein, David;
    • Lemons, Derek
    Publication type:
    Article
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    Whole exome sequencing reveals HSPA1L as a genetic risk factor for spontaneous preterm birth.

    Published in:
    PLoS Genetics, 2018, v. 14, n. 7, p. 1, doi. 10.1371/journal.pgen.1007394
    By:
    • Huusko, Johanna M.;
    • Karjalainen, Minna K.;
    • Graham, Britney E.;
    • Zhang, Ge;
    • Farrow, Emily G.;
    • Miller, Neil A.;
    • Jacobsson, Bo;
    • Eidem, Haley R.;
    • Murray, Jeffrey C.;
    • Bedell, Bruce;
    • Breheny, Patrick;
    • Brown, Noah W.;
    • Bødker, Frans L.;
    • Litterman, Nadia K.;
    • Jiang, Pan-Pan;
    • Russell, Laura;
    • Hinds, David A.;
    • Hu, Youna;
    • null, null;
    • Rokas, Antonis
    Publication type:
    Article