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Vertical niche occupation and potential metabolic interplay of microbial consortia in a deeply stratified meromictic model lake.
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- Limnology & Oceanography, 2023, v. 68, n. 11, p. 2492, doi. 10.1002/lno.12437
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- Article
Single‐amplified genomes reveal most streamlined free‐living marine bacteria.
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- Environmental Microbiology, 2023, v. 25, n. 6, p. 1136, doi. 10.1111/1462-2920.16348
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- Article
A novel and diverse group of Candidatus Patescibacteria from bathypelagic Lake Baikal revealed through long-read metagenomics.
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- Environmental Microbiome, 2023, v. 18, n. 1, p. 1, doi. 10.1186/s40793-023-00473-1
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- Article
Differences in gene expression patterns between cultured and natural Haloquadratum walsbyi ecotypes.
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- Frontiers in Microbiology, 2022, v. 13, p. 01, doi. 10.3389/fmicb.2022.1044446
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- Article
Elucidating the picocyanobacteria salinity divide through ecogenomics of new freshwater isolates.
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- BMC Biology, 2022, v. 20, n. 1, p. 1, doi. 10.1186/s12915-022-01379-z
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- Article
Enhanced Recovery of Microbial Genes and Genomes From a Marine Water Column Using Long-Read Metagenomics.
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- Frontiers in Microbiology, 2021, v. 12, p. 1, doi. 10.3389/fmicb.2021.708782
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- Article
The microbiome of the Black Sea water column analyzed by shotgun and genome centric metagenomics.
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- Environmental Microbiome, 2021, v. 16, n. 1, p. 1, doi. 10.1186/s40793-021-00374-1
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- Article
Microorganisms of Lake Baikal—the deepest and most ancient lake on Earth.
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- Applied Microbiology & Biotechnology, 2020, v. 104, n. 14, p. 6079, doi. 10.1007/s00253-020-10660-6
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- Article
Microbiome of the deep Lake Baikal, a unique oxic bathypelagic habitat.
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- Limnology & Oceanography, 2020, v. 65, n. 7, p. 1471, doi. 10.1002/lno.11401
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- Article
Ecogenomics of the SAR11 clade.
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- Environmental Microbiology, 2020, v. 22, n. 5, p. 1748, doi. 10.1111/1462-2920.14896
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- Article
Uncovering a hidden diversity: optimized protocols for the extraction of dsDNA bacteriophages from soil.
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- Microbiome, 2020, v. 8, n. 1, p. 1, doi. 10.1186/s40168-020-0795-2
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- Article
Prokaryotic Population Dynamics and Viral Predation in a Marine Succession Experiment Using Metagenomics.
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- Frontiers in Microbiology, 2019, v. 10, p. 1, doi. 10.3389/fmicb.2019.02926
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- Article
Marine-freshwater prokaryotic transitions require extensive changes in the predicted proteome.
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- Microbiome, 2019, v. 7, n. 1, p. N.PAG, doi. 10.1186/s40168-019-0731-5
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- Article
Novel Caudovirales associated with Marine Group I Thaumarchaeota assembled from metagenomes.
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- Environmental Microbiology, 2019, v. 21, n. 6, p. 1980, doi. 10.1111/1462-2920.14462
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- Article
Marine-freshwater transitions require extensive changes in the proteome. What it takes to live without salt.
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- Studia Universitatis Babeş-Bolyai, Biologia, 2019, v. 64, n. 1, p. 48
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- Article
Correction to: Genomic and metatranscriptomic analyses of carbon remineralization in an Antarctic polynya.
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- 2019
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- Correction Notice
Genomic and metatranscriptomic analyses of carbon remineralization in an Antarctic polynya.
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- Microbiome, 2019, v. 7, n. 1, p. N.PAG, doi. 10.1186/s40168-019-0643-4
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- Article
Numerous cultivated and uncultivated viruses encode ribosomal proteins.
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- Nature Communications, 2019, v. 10, n. 1, p. 1, doi. 10.1038/s41467-019-08672-6
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- Article
CRISPR analysis suggests that small circular single-stranded DNA smacoviruses infect Archaea instead of humans.
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- Nature Communications, 2019, v. 10, n. 1, p. 1, doi. 10.1038/s41467-018-08167-w
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- Article
Ecological and genomic features of two widespread freshwater picocyanobacteria.
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- Environmental Microbiology, 2018, v. 20, n. 10, p. 3757, doi. 10.1111/1462-2920.14377
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- Article
Fine metagenomic profile of the Mediterranean stratified and mixed water columns revealed by assembly and recruitment.
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- Microbiome, 2018, v. 6, n. 1, p. N.PAG, doi. 10.1186/s40168-018-0513-5
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- Article
Thousands of Novel Endolysins Discovered in Uncultured Phage Genomes.
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- Frontiers in Microbiology, 2018, p. 1, doi. 10.3389/fmicb.2018.01033
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- Article
Wild eel microbiome reveals that skin mucus offish could be a natural niche for aquatic mucosal pathogen evolution.
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- Microbiome, 2017, v. 5, p. 1, doi. 10.1186/s40168-017-0376-1
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- Article
Genome diversity of marine phages recovered from Mediterranean metagenomes: Size matters.
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- PLoS Genetics, 2017, v. 13, n. 9, p. 1, doi. 10.1371/journal.pgen.1007018
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- Article
Transcriptome analysis of Haloquadratum walsbyi: vanity is but the surface.
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- BMC Genomics, 2017, v. 18, p. 1, doi. 10.1186/s12864-017-3892-2
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- Article
Novel Synechococcus Genomes Reconstructed from Freshwater Reservoirs.
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- Frontiers in Microbiology, 2017, p. 1, doi. 10.3389/fmicb.2017.01151
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- Article
Single-virus genomics reveals hidden cosmopolitan and abundant viruses.
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- Nature Communications, 2017, v. 8, n. 6, p. 15892, doi. 10.1038/ncomms15892
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- Article
Networking in microbes: conjugative elements and plasmids in the genus Alteromonas.
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- BMC Genomics, 2017, v. 18, p. 1, doi. 10.1186/s12864-016-3461-0
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- Article
The discovery of CRISPR in archaea and bacteria.
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- FEBS Journal, 2016, v. 283, n. 17, p. 3162, doi. 10.1111/febs.13766
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- Article
Thalassospira australica sp. nov. isolated from sea water.
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- Antonie van Leeuwenhoek, 2016, v. 109, n. 8, p. 1091, doi. 10.1007/s10482-016-0710-9
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- Article
Not All Particles Are Equal: The Selective Enrichment of Particle-Associated Bacteria from the Mediterranean Sea.
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- Frontiers in Microbiology, 2016, p. 1, doi. 10.3389/fmicb.2016.00996
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- Article
Pangenome Evolution in the Marine Bacterium Alteromonas.
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- Genome Biology & Evolution, 2016, v. 8, n. 5, p. 1556, doi. 10.1093/gbe/evw098
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- Article
Metagenomic Insights into the Uncultured Diversity and Physiology of Microbes in Four Hypersaline Soda Lake Brines.
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- Frontiers in Microbiology, 2016, p. 1, doi. 10.3389/fmicb.2016.00211
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- Article
Marine Group II Archaea, potentially important players in the global ocean carbon cycle.
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- Frontiers in Microbiology, 2015, v. 6, p. 1, doi. 10.3389/fmicb.2015.01108
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- Article
Diversity of the cell-wall associated genomic island of the archaeon Haloquadratum walsbyi.
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- BMC Genomics, 2015, v. 16, n. 1, p. 1, doi. 10.1186/s12864-015-1794-8
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- Article
Diversity of the cell-wall associated genomic island of the archaeon Haloquadratum walsbyi.
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- BMC Genomics, 2015, v. 16, n. 1, p. 603, doi. 10.1186/s12864-015-1794-8
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- Article
A new class of marine Euryarchaeota group II from the mediterranean deep chlorophyll maximum.
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- ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2015, v. 9, n. 7, p. 1619, doi. 10.1038/ismej.2014.249
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- Article
Ecophysiological diversity of a novel member of the genus Alteromonas, and description of Alteromonas mediterranea sp. nov.
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- Antonie van Leeuwenhoek, 2015, v. 107, n. 1, p. 119, doi. 10.1007/s10482-014-0309-y
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- Article
Replicating phages in the epidermal mucosa of the eel (Anguilla anguilla).
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- Frontiers in Microbiology, 2015, v. 5, p. 1, doi. 10.3389/fmicb.2015.00003
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- Article
Key roles for freshwater Actinobacteria revealed by deep metagenomic sequencing.
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- Molecular Ecology, 2014, v. 23, n. 24, p. 6073, doi. 10.1111/mec.12985
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- Article
The Santa Pola saltern as a model for studying the microbiota of hypersaline environments.
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- Extremophiles, 2014, v. 18, n. 5, p. 811, doi. 10.1007/s00792-014-0681-6
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- Article
Genomes of Alteromonas australica, a world apart.
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- BMC Genomics, 2014, v. 15, n. 1, p. 1, doi. 10.1186/1471-2164-15-483
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- Article
RNA sequencing provides evidence for functional variability between naturally co-existing Alteromonas macleodii lineages.
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- BMC Genomics, 2014, v. 15, n. 1, p. 938, doi. 10.1186/1471-2164-15-938
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- Article
Pangenome Evidence for Extensive Interdomain Horizontal Transfer Affecting Lineage Core and Shell Genes in Uncultured Planktonic Thaumarchaeota and Euryarchaeota.
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- Genome Biology & Evolution, 2014, v. 6, n. 7, p. 1549, doi. 10.1093/gbe/evu127
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- Article
Homologous recombination is involved in the diversity of replacement flexible genomic islands in aquatic prokaryotes.
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- Frontiers in Genetics, 2014, v. 5, p. 1, doi. 10.3389/fgene.2014.00147
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- Article
Comparison of prokaryotic community structure from Mediterranean and Atlantic saltern concentrator ponds by a metagenomic approach.
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- Frontiers in Microbiology, 2014, v. 5, p. 1, doi. 10.3389/fmicb.2014.00196
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- Article
Genomes of Two New Ammonia-Oxidizing Archaea Enriched from Deep Marine Sediments.
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- PLoS ONE, 2014, v. 9, n. 5, p. 1, doi. 10.1371/journal.pone.0096449
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- Article
Haloarcula marismortui archaellin genes as ecoparalogs.
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- Extremophiles, 2014, v. 18, n. 2, p. 341, doi. 10.1007/s00792-013-0619-4
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- Article
Genomes of "Spiribacter", a streamlined, successful halophilic bacterium.
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- BMC Genomics, 2013, v. 14, n. 1, p. 1, doi. 10.1186/1471-2164-14-787
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- Article
Expanding the Marine Virosphere Using Metagenomics.
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- PLoS Genetics, 2013, v. 9, n. 12, p. 1, doi. 10.1371/journal.pgen.1003987
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- Article