Works by Rho, Mina
Results: 37
A novice’s guide to analyzing NGS-derived organelle and metagenome data.
- Published in:
- Algae, 2016, v. 31, n. 2, p. 137, doi. 10.4490/algae.2016.31.6.5
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- Article
Eosinophil‐derived interferon‐γ drives transmembrane protein 119–induced new bone formation in chronic rhinosinusitis with nasal polyps.
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- International Forum of Allergy & Rhinology, 2023, v. 13, n. 3, p. 242, doi. 10.1002/alr.23076
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- Article
Functional dynamics of bacterial species in the mouse gut microbiome revealed by metagenomic and metatranscriptomic analyses.
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- PLoS ONE, 2020, v. 15, n. 1, p. 1, doi. 10.1371/journal.pone.0227886
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- Article
Interpolative multidimensional scaling techniques for the identification of clusters in very large sequence sets.
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- BMC Bioinformatics, 2012, v. 13, n. Suppl 2, p. 1, doi. 10.1186/1471-2105-13-S2-S9
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- Article
Genome-scale metabolic modeling and in silico analysis of opportunistic skin pathogen Cutibacterium acnes.
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- Frontiers in Cellular & Infection Microbiology, 2023, p. 1, doi. 10.3389/fcimb.2023.1099314
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- Article
Metagenomic characterization of sphingomyelinase C in the microbiome of humans and environments.
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- Frontiers in Cellular & Infection Microbiology, 2022, v. 12, p. 1, doi. 10.3389/fcimb.2022.1015706
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- Article
MGEScan: a Galaxy-based system for identifying retrotransposons in genomes.
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- Bioinformatics, 2016, v. 32, n. 16, p. 2502, doi. 10.1093/bioinformatics/btw157
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- Article
Comparative analyses of the faecal resistome against β-lactam and quinolone antibiotics in humans and livestock using metagenomic sequencing.
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- Scientific Reports, 2023, v. 13, n. 1, p. 1, doi. 10.1038/s41598-023-48221-2
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- Article
Independent Mammalian Genome Contractions Following the KT Boundary.
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- Genome Biology & Evolution, 2009, v. 1, p. 2, doi. 10.1093/gbe/evp007
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- Article
MultiChem: predicting chemical properties using multi-view graph attention network.
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- BioData Mining, 2025, v. 18, n. 1, p. 1, doi. 10.1186/s13040-024-00419-4
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- Article
Oral microbiome-systemic link studies: perspectives on current limitations and future artificial intelligence-based approaches.
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- 2020
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- Literature Review
Stability of Gut Enterotypes in Korean Monozygotic Twins and Their Association with Biomarkers and Diet.
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- Scientific Reports, 2014, p. 1, doi. 10.1038/srep07348
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- Article
Analysis of Bacteria-derived Extracellular Vesicles in the Urine of Patients with Sepsis.
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- Ethiopian Medical Journal, 2025, v. 63, n. 1, p. 317, doi. 10.4314/emj.v63i1.4
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- Article
ViBE: a hierarchical BERT model to identify eukaryotic viruses using metagenome sequencing data.
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- Briefings in Bioinformatics, 2022, v. 23, n. 4, p. 1, doi. 10.1093/bib/bbac204
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- Article
Multimodal deep learning applied to classify healthy and disease states of human microbiome.
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- Scientific Reports, 2022, v. 12, n. 1, p. 1, doi. 10.1038/s41598-022-04773-3
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- Article
LTR retroelements in the genome of Daphnia pulex.
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- BMC Genomics, 2010, v. 11, p. 425, doi. 10.1186/1471-2164-11-425
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- Article
De novo identification of LTR retrotransposons in eukaryotic genomes.
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- BMC Genomics, 2007, v. 8, p. 1, doi. 10.1186/1471-2164-8-90
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- Article
Diverse CRISPRs Evolving in Human Microbiomes.
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- PLoS Genetics, 2012, v. 8, n. 6, p. 1, doi. 10.1371/journal.pgen.1002441
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- Article
Analysis of the association between host genetics, smoking, and sputum microbiota in healthy humans.
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- Scientific Reports, 2016, p. 23745, doi. 10.1038/srep23745
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- Article
Antibiotic resistomes discovered in the gut microbiomes of Korean swine and cattle.
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- GigaScience, 2020, v. 9, n. 5, p. N.PAG, doi. 10.1093/gigascience/giaa043
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- Article
Different maturation of gut microbiome in Korean children.
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- Frontiers in Microbiology, 2022, v. 13, p. 1, doi. 10.3389/fmicb.2022.1036533
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- Article
Deciphering Resistome in Patients With Chronic Obstructive Pulmonary Diseases and Clostridioides difficile Infections.
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- Frontiers in Microbiology, 2022, v. 13, p. 1, doi. 10.3389/fmicb.2022.919907
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- Article
iMGEins: detecting novel mobile genetic elements inserted in individual genomes.
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- BMC Genomics, 2018, v. 19, n. 1, p. 1, doi. 10.1186/s12864-018-5290-9
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- Article
Integrative metagenomic and biochemical studies on rifamycin ADP-ribosyltransferases discovered in the sediment microbiome.
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- Scientific Reports, 2018, v. 8, n. 1, p. 1, doi. 10.1038/s41598-018-30547-x
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- Article
Application of computational approaches to analyze metagenomic data.
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- Journal of Microbiology, 2021, v. 59, n. 3, p. 233, doi. 10.1007/s12275-021-0632-8
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- Article
MegaR: an interactive R package for rapid sample classification and phenotype prediction using metagenome profiles and machine learning.
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- BMC Bioinformatics, 2021, v. 22, n. 1, p. 1, doi. 10.1186/s12859-020-03933-4
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- Article
Stitching gene fragments with a network matching algorithm improves gene assembly for metagenomics.
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- Bioinformatics, 2012, v. 28, n. 18, p. i363
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- Article
Biomedical Flat and Nested Named Entity Recognition: Methods, Challenges, and Advances.
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- Applied Sciences (2076-3417), 2024, v. 14, n. 20, p. 9302, doi. 10.3390/app14209302
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- Article
Data-Driven Modeling for Species-Level Taxonomic Assignment From 16S rRNA: Application to Human Microbiomes.
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- Frontiers in Microbiology, 2020, v. 11, p. N.PAG, doi. 10.3389/fmicb.2020.570825
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- Article
CRISPR-Cas systems target a diverse collection of invasive mobile genetic elements in human microbiomes.
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- Genome Biology, 2013, v. 14, n. 4, p. 1, doi. 10.1186/gb-2013-14-4-r40
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- Article
High fecal carriage of blaCTX-M, blaCMY-2, and plasmid-mediated quinolone resistance genes among healthy Korean people in a metagenomic analysis.
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- Scientific Reports, 2021, v. 11, n. 1, p. 1, doi. 10.1038/s41598-021-84974-4
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- Article
Discovering microbe-disease associations from the literature using a hierarchical long short-term memory network and an ensemble parser model.
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- Scientific Reports, 2021, v. 11, n. 1, p. 1, doi. 10.1038/s41598-021-83966-8
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- Article
Quantitative characterization of Clostridioides difficile population in the gut microbiome of patients with C. difficile infection and their association with clinical factors.
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- Scientific Reports, 2020, v. 10, n. 1, p. 1, doi. 10.1038/s41598-020-74090-0
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- Article
FragGeneScan: predicting genes in short and error-prone reads.
- Published in:
- Nucleic Acids Research, 2010, v. 38, n. 20, p. e191, doi. 10.1093/nar/gkq747
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- Article
MGEScan-non-LTR: computational identification and classification of autonomous non-LTR retrotransposons in eukaryotic genomes.
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- Nucleic Acids Research, 2009, v. 37, n. 21, p. e143, doi. 10.1093/nar/gkp752
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- Article
Photosynthetic functions of Synechococcus in the ocean microbiomes of diverse salinity and seasons.
- Published in:
- PLoS ONE, 2018, v. 13, n. 1, p. 1, doi. 10.1371/journal.pone.0190266
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- Article
Antibiotic Sensitivity and Nasal Microbiome in Patients with Acute Bacterial Rhinosinusitis.
- Published in:
- Laryngoscope, 2024, v. 134, n. 3, p. 1081, doi. 10.1002/lary.30950
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- Article