Works matching AU Ren, Yingxue

Results: 36

DiSC: a statistical tool for fast differential expression analysis of individual-level single-cell RNA-seq data Open Access.

Published in:

Bioinformatics, 2025, v. 41, n. 6, p. 1, doi. 10.1093/bioinformatics/btaf327

By:

Zhang, Lujun;
Yang, Lu;
Ren, Yingxue;
Zhang, Shuwen;
Guan, Weihua;
Chen, Jun

Publication type:

Article

Development and Validation of a Framework on Consumer Satisfaction in Fresh Food E-Shopping: The Integration of Theory and Data.

Published in:

Journal of Theoretical & Applied Electronic Commerce Research, 2025, v. 20, n. 2, p. 114, doi. 10.3390/jtaer20020114

By:

Ren, Yingxue;
Qu, Yitong;
Liang, Junbin;
Zhao, Fangfang

Publication type:

Article

A novel histone deacetylase inhibitor W2A-16 improves the barrier integrity in brain vascular endothelial cells.

Published in:

Frontiers in Cellular Neuroscience, 2024, p. 1, doi. 10.3389/fncel.2024.1368018

By:

Yasuteru Inoue;
Yingxue Ren;
Shuwen Zhang;
Bamkole, Michael;
Islam, Naeyma N.;
Selvaraj, Manikandan;
Wenyan Lu;
Caulfield, Thomas R.;
Yonghe Li;
Takahisa Kanekiyo

Publication type:

Article

ABCA7 Regulates Brain Fatty Acid Metabolism During LPS-Induced Acute Inflammation.

Published in:

Frontiers in Neuroscience, 2021, v. 15, p. N.PAG, doi. 10.3389/fnins.2021.647974

By:

Aikawa, Tomonori;
Ren, Yingxue;
Holm, Marie-Louise;
Asmann, Yan W.;
Alam, Amer;
Fitzgerald, Michael L.;
Bu, Guojun;
Kanekiyo, Takahisa

Publication type:

Article

Neuronal ABCA7 deficiency aggravates mitochondrial dysfunction and neurodegeneration in Alzheimer's disease.

Published in:

Alzheimer's & Dementia: The Journal of the Alzheimer's Association, 2025, v. 21, n. 3, p. 1, doi. 10.1002/alz.70112

By:

Wang, Ni;
Pan, Yining;
Starling, Skylar C.;
Haskell, Devon H.;
Quintero, Astrid C.;
Kawatani, Keiji;
Inoue, Yasuteru;
Shue, Francis;
Ma, Xiaoye;
Aikawa, Tomonori;
Martens, Yuka A.;
Kurti, Aishe;
Parsons, Tammee M.;
Perkerson, Ralph B.;
Roy, Bhaskar;
Raulin, Ana‐Caroline;
Ren, Yingxue;
DeTure, Michael;
Dickson, Dennis W.;
Bao, Hanmei

Publication type:

Article

CSF biomarkers of immune activation and Alzheimer's disease for predicting cognitive impairment risk in the elderly.

Published in:

Alzheimer's & Dementia: The Journal of the Alzheimer's Association, 2024, v. 20, n. S9, p. 1, doi. 10.1002/alz.093743

By:

Shue, Francis;
White, Launia J;
Hendrix, Rachel;
Ulrich, Jason D;
Henson, Rachel L.;
Knight, William C.;
Martens, Yuka A;
Wang, Ni;
Roy, Bhaskar;
Starling, Skylar C;
Ren, Yingxue;
Xiong, Chengjie;
Asmann, Yan W.;
Syrjanen, Jeremy A.;
Vassilaki, Maria;
Mielke, Michelle M.;
Cruchaga, Carlos;
Holtzman, David M.;
Bu, Guojun;
Petersen, Ronald C.

Publication type:

Article

CSF biomarkers of immune activation and Alzheimer's disease for predicting cognitive impairment risk in the elderly.

Published in:

Alzheimer's & Dementia: The Journal of the Alzheimer's Association, 2024, v. 20, n. S2, p. 1, doi. 10.1002/alz.087693

By:

Shue, Francis;
White, Launia J;
Hendrix, Rachel;
Ulrich, Jason D;
Henson, Rachel L.;
Knight, William C.;
Martens, Yuka A;
Wang, Ni;
Roy, Bhaskar;
Starling, Skylar C;
Ren, Yingxue;
Xiong, Chengjie;
Asmann, Yan W.;
Syrjanen, Jeremy A.;
Vassilaki, Maria;
Mielke, Michelle M.;
Cruchaga, Carlos;
Holtzman, David M.;
Bu, Guojun;
Petersen, Ronald C.

Publication type:

Article

Discovery of Genes Underlying Cognitive Resilience in Individuals Predisposed to Alzheimer's Disease Risk.

Published in:

Alzheimer's & Dementia: The Journal of the Alzheimer's Association, 2024, v. 20, n. S2, p. 1, doi. 10.1002/alz.084683

By:

Tsai, Wei;
McNiff, Caitlin E.;
Reddy, Joseph S.;
Wang, Xue;
Quicksall, Zachary;
Nho, Kwangsik;
Dunn, Amy R;
Allen, Mariet;
Heckman, Michael G.;
Ren, Yingxue;
Zhao, Na;
Kantarci, Kejal;
Mielke, Michelle M.;
Petersen, Ronald C.;
Kaczorowski, Catherine C.;
Carrasquillo, Minerva M.;
Saykin, Andrew J.;
Ertekin‐Taner, Nilüfer

Publication type:

Article

Specific expression of APOE in astrocytes reduces Aβ accumulation and plaque‐related pathology in a mouse model of amyloidosis.

Published in:

Alzheimer's & Dementia: The Journal of the Alzheimer's Association, 2024, v. 20, p. 1, doi. 10.1002/alz.090129

By:

WANG, NA;
Doss, Sydney V.;
Chang, Yuzhou;
Tauer, William;
Ren, Yingxue;
Qi, Fangfang;
Bu, Guojun;
Liu, Chia‐Chen;
Wu, Long‐Jun

Publication type:

Article

Brain‐targeting liposome‐based APOE2 gene delivery exacerbates soluble amyloid‐β accumulation in App<sup>NL‐G‐F</sup> mice.

Published in:

Alzheimer's & Dementia: The Journal of the Alzheimer's Association, 2024, v. 20, p. 1, doi. 10.1002/alz.088234

By:

Wang, Ni;
Parsons, Tammee M;
Ren, Yingxue;
Pan, Yining;
Starling, Skylar C;
Muolokwu, Chinenye;
Singh, Jagdish;
Kanekiyo, Takahisa

Publication type:

Article

APOE genotype modifies benefits of calorie restriction against aging.

Published in:

Alzheimer's & Dementia: The Journal of the Alzheimer's Association, 2024, v. 20, p. 1, doi. 10.1002/alz.085702

By:

Qiao, Wenhui;
Chen, Yixing;
Ren, Yingxue;
Ikezu, Tadafumi C;
Johnson, Stephen;
Li, Fuyao;
Chen, Kai;
Pan, Meixia;
Kashyap, Sonu;
Bueser, Katrina Rae;
Wetmore, Allison;
Kurti, Aishe I.;
Meneses, Axel D.;
Owens, Jada A.;
Chini, Eduardo N.;
Chen, Jun;
Han, Xianlin;
Bu, Guojun;
Zhao, Na

Publication type:

Article

Author Correction: APOE4 exacerbates synapse loss and neurodegeneration in Alzheimer's disease patient iPSC-derived cerebral organoids.

Published in:

2021

By:

Zhao, Jing;
Fu, Yuan;
Yamazaki, Yu;
Ren, Yingxue;
Davis, Mary D.;
Liu, Chia-Chen;
Lu, Wenyan;
Wang, Xue;
Chen, Kai;
Cherukuri, Yesesri;
Jia, Lin;
Martens, Yuka A.;
Job, Lucy;
Shue, Francis;
Nguyen, Thanh Thanh;
Younkin, Steven G.;
Graff-Radford, Neill R.;
Wszolek, Zbigniew K.;
Brafman, David A.;
Asmann, Yan W.

Publication type:

Correction Notice

APOE deficiency impacts neural differentiation and cholesterol biosynthesis in human iPSC-derived cerebral organoids.

Published in:

Stem Cell Research & Therapy, 2023, v. 14, n. 1, p. 1, doi. 10.1186/s13287-023-03444-y

By:

Zhao, Jing;
Ikezu, Tadafumi C.;
Lu, Wenyan;
Macyczko, Jesse R.;
Li, Yonghe;
Lewis-Tuffin, Laura J.;
Martens, Yuka A.;
Ren, Yingxue;
Zhu, Yiyang;
Asmann, Yan W.;
Ertekin-Taner, Nilüfer;
Kanekiyo, Takahisa;
Bu, Guojun

Publication type:

Article

Loss of Tmem106b leads to cerebellum Purkinje cell death and motor deficits.

Published in:

Brain Pathology, 2021, v. 31, n. 3, p. 1, doi. 10.1111/bpa.12945

By:

Rademakers, Rosa;
Nicholson, Alexandra M.;
Ren, Yingxue;
Koga, Shunsuke;
Nguyen, Hung Phuoc;
Brooks, Mieu;
Qiao, Wenhui;
Quicksall, Zachary S.;
Matchett, Billie;
Perkerson, Ralph B.;
Kurti, Aishe;
Castanedes‐Casey, Monica;
Phillips, Virginia;
Librero, Ariston L;
Fernandez De Castro, Cristhoper H.;
Baker, Matthew C.;
Roemer, Shanu F.;
Murray, Melissa E.;
Asmann, Yan;
Fryer, John D.

Publication type:

Article

Comprehensive genomic profiling of a rare thyroid follicular dendritic cell sarcoma.

Published in:

Rare Tumors, 2017, v. 9, n. 2, p. 50, doi. 10.4081/rt.2017.6834

By:

Davila, Jaime I.;
Starr, Jason S.;
Attia, Steven;
Wang, Chen;
Knudson, Ryan A.;
Necela, Brian M.;
Sarangi, Vivekananda;
Sun, Zhifu;
Ren, Yingxue;
Casler, John D.;
Menke, David M.;
Oliver, Gavin R.;
Joseph, Richard W.;
Copland, John A.;
Parker, Alexander S.;
Kocher, Jean-Pierre A.;
Thompson, E. Aubrey;
Smallridge, Robert C.;
Asmann, Yan W.

Publication type:

Article

<italic>TMEM106B</italic> haplotypes have distinct gene expression patterns in aged brain.

Published in:

Molecular Neurodegeneration, 2018, v. 13, n. 1, p. N.PAG, doi. 10.1186/s13024-018-0268-2

By:

Ren, Yingxue;
van Blitterswijk, Marka;
Allen, Mariet;
Carrasquillo, Minerva M.;
Reddy, Joseph S.;
Wang, Xue;
Beach, Thomas G.;
Dickson, Dennis W.;
Ertekin-Taner, Nilüfer;
Asmann, Yan W.;
Rademakers, Rosa

Publication type:

Article

HLA class-I and class-II restricted neoantigen loads predict overall survival in breast cancer.

Published in:

OncoImmunology, 2020, v. 9, n. 1, p. 1, doi. 10.1080/2162402X.2020.1744947

By:

Ren, Yingxue;
Cherukuri, Yesesri;
Wickland, Daniel P.;
Sarangi, Vivekananda;
Tian, Shulan;
Carter, Jodi M.;
Mansfield, Aaron S.;
Block, Matthew S.;
Sherman, Mark E.;
Knutson, Keith L.;
Lin, Yi;
Asmann, Yan W.

Publication type:

Article

Identification of missing variants by combining multiple analytic pipelines.

Published in:

BMC Bioinformatics, 2018, v. 19, n. 1, p. 1, doi. 10.1186/s12859-018-2151-0

By:

Ren, Yingxue;
Reddy, Joseph S.;
Pottier, Cyril;
Sarangi, Vivekananda;
Tian, Shulan;
Sinnwell, Jason P.;
McDonnell, Shannon K.;
Biernacka, Joanna M.;
Carrasquillo, Minerva M.;
Ross, Owen A.;
Ertekin-Taner, Nilüfer;
Rademakers, Rosa;
Hudson, Matthew;
Mainzer, Liudmila Sergeevna;
Asmann, Yan W.

Publication type:

Article

Network approaches for omics studies of neurodegenerative diseases.

Published in:

Frontiers in Genetics, 2022, v. 13, p. 1, doi. 10.3389/fgene.2022.984338

By:

Na Zhao;
Quicksall, Zachary;
Asmann, Yan W.;
Yingxue Ren

Publication type:

Article

Secretome from iPSC-derived MSCs exerts proangiogenic and immunosuppressive effects to alleviate radiation-induced vascular endothelial cell damage.

Published in:

Stem Cell Research & Therapy, 2024, v. 15, n. 1, p. 1, doi. 10.1186/s13287-024-03847-5

By:

Gupta, Kshama;
Perkerson III, Ralph B.;
Parsons, Tammee M.;
Angom, Ramacharan;
Amerna, Danilyn;
Burgess, Jeremy D.;
Ren, Yingxue;
McLean, Pamela J.;
Mukhopadhyay, Debabrata;
Vibhute, Prasanna;
Wszolek, Zbigniew K.;
Zubair, Abba C.;
Quiñones-Hinojosa, Alfredo;
Kanekiyo, Takahisa

Publication type:

Article

A systematic assessment of quality assurance-based food safety management system of Chinese edible oil manufacturer in view of context characteristics.

Published in:

Total Quality Management & Business Excellence, 2016, v. 27, n. 7/8, p. 897, doi. 10.1080/14783363.2016.1187995

By:

Ren, Yingxue;
He, Zhen;
Luning, Pieternel A.

Publication type:

Article

What affects the use of smartphones by the elderly? A hybrid survey from China.

Published in:

National Accounting Review, 2023, v. 5, n. 3, p. 1, doi. 10.3934/NAR.2023015

By:

Huang, Menghua;
Ren, Yingxue;
Wang, Xu;
Li, Xinzhe;
Li, Li

Publication type:

Article

Managing genomic variant calling workflows with Swift/T.

Published in:

PLoS ONE, 2019, v. 14, n. 7, p. 1, doi. 10.1371/journal.pone.0211608

By:

Ahmed, Azza E.;
Heldenbrand, Jacob;
Asmann, Yan;
Fadlelmola, Faisal M.;
Katz, Daniel S.;
Kendig, Katherine;
Kendzior, Matthew C.;
Li, Tiffany;
Ren, Yingxue;
Rodriguez, Elliott;
Weber, Matthew R.;
Wozniak, Justin M.;
Zermeno, Jennie;
Mainzer, Liudmila S.

Publication type:

Article

Correction to: Apolipoprotein E regulates lipid metabolism and α‑synuclein pathology in human iPSC‑derived cerebral organoids.

Published in:

2022

By:

Zhao, Jing;
Lu, Wenyan;
Ren, Yingxue;
Fu, Yuan;
Martens, Yuka A.;
Shue, Francis;
Davis, Mary D.;
Wang, Xue;
Chen, Kai;
Li, Fuyao;
Liu, Chia-Chen;
Graff-Radford, Neill R.;
Wszolek, Zbigniew K.;
Younkin, Steven G.;
Brafman, David A.;
Ertekin-Taner, Nilüfer;
Asmann, Yan W.;
Dickson, Dennis W.;
Xu, Ziying;
Pan, Meixia

Publication type:

Correction Notice

Apolipoprotein E regulates lipid metabolism and α-synuclein pathology in human iPSC-derived cerebral organoids.

Published in:

Acta Neuropathologica, 2021, v. 142, n. 5, p. 807, doi. 10.1007/s00401-021-02361-9

By:

Zhao, Jing;
Lu, Wenyan;
Ren, Yingxue;
Fu, Yuan;
Martens, Yuka A.;
Shue, Francis;
Davis, Mary D.;
Wang, Xue;
Chen, Kai;
Li, Fuyao;
Liu, Chia-Chen;
Graff-Radford, Neill R.;
Wszolek, Zbigniew K.;
Younkin, Steven G.;
Brafman, David A.;
Ertekin-Taner, Nilüfer;
Asmann, Yan W.;
Dickson, Dennis W.;
Xu, Ziying;
Pan, Meixia

Publication type:

Article

Deconvolution reveals cell-type-specific transcriptomic changes in the aging mouse brain.

Published in:

Scientific Reports, 2023, v. 13, n. 1, p. 1, doi. 10.1038/s41598-023-44183-7

By:

Ren, Yingxue;
Wang, Xue;
Zhang, Shuwen;
Hu, Hongru;
Quicksall, Zachary;
Lee, Sangderk;
Morganti, Josh M.;
Johnson, Lance A.;
Asmann, Yan W.;
Zhao, Na

Publication type:

Article

Deconvolution reveals cell-type-specific transcriptomic changes in the aging mouse brain.

Published in:

Scientific Reports, 2023, v. 13, n. 1, p. 1, doi. 10.1038/s41598-023-44183-7

By:

Ren, Yingxue;
Wang, Xue;
Zhang, Shuwen;
Hu, Hongru;
Quicksall, Zachary;
Lee, Sangderk;
Morganti, Josh M.;
Johnson, Lance A.;
Asmann, Yan W.;
Zhao, Na

Publication type:

Article

Shared brain transcriptomic signature in TDP-43 type A FTLD patients with or without GRN mutations.

Published in:

2022

By:

Pottier, Cyril;
Mateiu, Ligia;
Baker, Matthew C;
DeJesus-Hernandez, Mariely;
Vicente, Cristina Teixeira;
Finch, NiCole A;
Tian, Shulan;
Blitterswijk, Marka van;
Murray, Melissa E;
Ren, Yingxue;
Petrucelli, Leonard;
Oskarsson, Björn;
Biernacka, Joanna M;
Graff-Radford, Neill R;
Boeve, Bradley F;
Petersen, Ronald C;
Josephs, Keith A;
Asmann, Yan W;
Dickson, Dennis W;
Rademakers, Rosa

Publication type:

journal article

Loss of TMEM106B leads to myelination deficits: implications for frontotemporal dementia treatment strategies.

Published in:

2020

By:

Zhou, Xiaolai;
Nicholson, Alexandra M;
Ren, Yingxue;
Brooks, Mieu;
Jiang, Peizhou;
Zuberi, Aamir;
Phuoc, Hung Nguyen;
Perkerson, Ralph B;
Matchett, Billie;
Parsons, Tammee M;
Finch, NiCole A;
Lin, Wenlang;
Qiao, Wenhui;
Castanedes-Casey, Monica;
Phillips, Virginia;
Librero, Ariston L;
Asmann, Yan;
Bu, Guojun;
Murray, Melissa E;
Lutz, Cathleen

Publication type:

journal article

APOE4 exacerbates synapse loss and neurodegeneration in Alzheimer's disease patient iPSC-derived cerebral organoids.

Published in:

Nature Communications, 2020, v. 11, n. 1, p. N.PAG, doi. 10.1038/s41467-020-19264-0

By:

Zhao, Jing;
Fu, Yuan;
Yamazaki, Yu;
Ren, Yingxue;
Davis, Mary D.;
Liu, Chia-Chen;
Lu, Wenyan;
Wang, Xue;
Chen, Kai;
Cherukuri, Yesesri;
Jia, Lin;
Martens, Yuka A.;
Job, Lucy;
Shue, Francis;
Nguyen, Thanh Thanh;
Younkin, Steven G.;
Graff-Radford, Neill R.;
Wszolek, Zbigniew K.;
Brafman, David A.;
Asmann, Yan W.

Publication type:

Article

Suppression of Wnt/β-Catenin Signaling Is Associated with Downregulation of Wnt1, PORCN, and Rspo2 in Alzheimer's Disease.

Published in:

Molecular Neurobiology, 2023, v. 60, n. 1, p. 26, doi. 10.1007/s12035-022-03065-1

By:

Macyczko, Jesse R.;
Wang, Na;
Zhao, Jing;
Ren, Yingxue;
Lu, Wenyan;
Ikezu, Tadafumi C.;
Zhao, Na;
Liu, Chia-Chen;
Bu, Guojun;
Li, Yonghe

Publication type:

Article

Extensive transcriptomic study emphasizes importance of vesicular transport in C9orf72 expansion carriers.

Published in:

Acta Neuropathologica Communications, 2019, v. 7, n. 1, p. N.PAG, doi. 10.1186/s40478-019-0797-0

By:

Dickson, Dennis W.;
Baker, Matthew C.;
Jackson, Jazmyne L.;
DeJesus-Hernandez, Mariely;
Finch, NiCole A.;
Tian, Shulan;
Heckman, Michael G.;
Pottier, Cyril;
Gendron, Tania F.;
Murray, Melissa E.;
Ren, Yingxue;
Reddy, Joseph S.;
Graff-Radford, Neill R.;
Boeve, Bradley F.;
Petersen, Ronald C.;
Knopman, David S.;
Josephs, Keith A.;
Petrucelli, Leonard;
Oskarsson, Björn;
Sheppard, John W.

Publication type:

Article

APOE3-Jacksonville (V236E) variant reduces self-aggregation and risk of dementia.

Published in:

Science Translational Medicine, 2021, v. 13, n. 613, p. 1, doi. 10.1126/scitranslmed.abc9375

By:

Liu, Chia-Chen;
Murray, Melissa E.;
Li, Xia;
Zhao, Na;
Wang, Na;
Heckman, Michael G.;
Shue, Francis;
Martens, Yuka;
Li, Yonghe;
Raulin, Ana-Caroline;
Rosenberg, Cassandra L.;
Doss, Sydney V.;
Zhao, Jing;
Wren, Melissa C.;
Jia, Lin;
Ren, Yingxue;
Ikezu, Tadafumi C.;
Lu, Wenyan;
Fu, Yuan;
Caulfield, Thomas

Publication type:

Article

APOE4 exacerbates α-synuclein pathology and related toxicity independent of amyloid.

Published in:

Science Translational Medicine, 2020, v. 12, n. 529, p. 1, doi. 10.1126/scitranslmed.aay1809

By:

Zhao, Na;
Attrebi, Olivia N.;
Ren, Yingxue;
Qiao, Wenhui;
Sonustun, Berkiye;
Martens, Yuka A.;
Meneses, Axel D.;
Li, Fuyao;
Shue, Francis;
Zheng, Jiaying;
Van Ingelgom, Alexandra J.;
Davis, Mary D.;
Kurti, Aishe;
Knight, Joshua A.;
Linares, Cynthia;
Chen, Yixing;
Delenclos, Marion;
Liu, Chia-Chen;
Fryer, John D.;
Asmann, Yan W.

Publication type:

Article

Impact of variant-level batch effects on identification of genetic risk factors in large sequencing studies.

Published in:

PLoS ONE, 2021, v. 16, n. 4, p. 1, doi. 10.1371/journal.pone.0249305

By:

Wickland, Daniel P.;
Ren, Yingxue;
Sinnwell, Jason P.;
Reddy, Joseph S.;
Pottier, Cyril;
Sarangi, Vivekananda;
Carrasquillo, Minerva M.;
Ross, Owen A.;
Younkin, Steven G.;
Ertekin-Taner, Nilüfer;
Rademakers, Rosa;
Hudson, Matthew E.;
Mainzer, Liudmila Sergeevna;
Biernacka, Joanna M.;
Asmann, Yan W.

Publication type:

Article

O3‐06‐02: POLYGENIC SCORE ANALYSIS OF EXONIC VARIANTS IN AN IMMUNE CO‐REGULATORY NETWORK IDENTIFIES NOVEL PROTEIN‐ALTERING VARIANTS THAT ASSOCIATE WITH ALZHEIMER'S DISEASE.

Published in:

Alzheimer's & Dementia: The Journal of the Alzheimer's Association, 2018, v. 14, p. P1025, doi. 10.1016/j.jalz.2018.06.2801

By:

Reddy, Joseph S.;
Allen, Mariet;
Wang, Xue;
Biernacka, Joanna M.;
Gregory, Jenkins D.;
Toral, Shastri M.;
McDonnell, Shannon K.;
Sarangi, Vivekananda;
Sinnwell, Jason P.;
Asmann, Yan W.;
Carrasquillo, Minerva M.;
Pottier, Cyril P.;
Ren, Yingxue;
Younkin, Curtis S.;
Rademakers, Rosa;
Ross, Owen A.;
Ertekin-Taner, Nilufer;
Younkin, Steven G.

Publication type:

Article