Works matching AU Raes, Jeroen

Results: 98

Microbial interactions: from networks to models.

Published in:

Nature Reviews Microbiology, 2012, v. 10, n. 8, p. 538, doi. 10.1038/nrmicro2832

By:

Faust, Karoline;
Raes, Jeroen

Publication type:

Article

Molecular eco-systems biology: towards an understanding of community function.

Published in:

Nature Reviews Microbiology, 2008, v. 6, n. 9, p. 693, doi. 10.1038/nrmicro1935

By:

Raes, Jeroen;
Bork, Peer

Publication type:

Article

Analysis of the draft genome of Pseudomonas fluorescens ATCC17400 indicates a capacity to take up iron from a wide range of sources, including different exogenous pyoverdines.

Published in:

BioMetals, 2014, v. 27, n. 4, p. 633, doi. 10.1007/s10534-014-9734-7

By:

Ye, Lumeng;
Matthijs, Sandra;
Bodilis, Josselin;
Hildebrand, Falk;
Raes, Jeroen;
Cornelis, Pierre

Publication type:

Article

A combinatorial approach to the structure elucidation of a pyoverdine siderophore produced by a Pseudomonas putida isolate and the use of pyoverdine as a taxonomic marker for typing P. putida subspecies.

Published in:

BioMetals, 2013, v. 26, n. 4, p. 561, doi. 10.1007/s10534-013-9653-z

By:

Ye, Lumeng;
Ballet, Steven;
Hildebrand, Falk;
Laus, Georges;
Guillemyn, Karel;
Raes, Jeroen;
Matthijs, Sandra;
Martins, José;
Cornelis, Pierre

Publication type:

Article

A web application for sample size and power calculation in case-control microbiome studies.

Published in:

Bioinformatics, 2016, v. 32, n. 13, p. 2038, doi. 10.1093/bioinformatics/btw099

By:

Mattiello, Federico;
Verbist, Bie;
Faust, Karoline;
Raes, Jeroen;
Shannon, William D.;
Bijnens, Luc;
Thas, Olivier

Publication type:

Article

SmashCommunity: a metagenomic annotation and analysis tool.

Published in:

Bioinformatics, 2010, v. 26, n. 23, p. 2977, doi. 10.1093/bioinformatics/btq536

By:

Arumugam, Manimozhiyan;
Harrington, Eoghan D.;
Foerstner, Konrad U.;
Raes, Jeroen;
Bork, Peer

Publication type:

Article

SmashCell: a software framework for the analysis of single-cell amplified genome sequences.

Published in:

Bioinformatics, 2010, v. 26, n. 23, p. 2979, doi. 10.1093/bioinformatics/btq564

By:

Harrington, Eoghan D.;
Arumugam, Manimozhiyan;
Raes, Jeroen;
Bork, Peer;
Relman, David A.

Publication type:

Article

Deep ocean metagenomes provide insight into the metabolic architecture of bathypelagic microbial communities.

Published in:

Communications Biology, 2021, v. 4, n. 1, p. 1, doi. 10.1038/s42003-021-02112-2

By:

Acinas, Silvia G.;
Sánchez, Pablo;
Salazar, Guillem;
Cornejo-Castillo, Francisco M.;
Sebastián, Marta;
Logares, Ramiro;
Royo-Llonch, Marta;
Paoli, Lucas;
Sunagawa, Shinichi;
Hingamp, Pascal;
Ogata, Hiroyuki;
Lima-Mendez, Gipsi;
Roux, Simon;
González, José M.;
Arrieta, Jesús M.;
Alam, Intikhab S.;
Kamau, Allan;
Bowler, Chris;
Raes, Jeroen;
Pesant, Stéphane

Publication type:

Article

Gut microbiome variation is associated to Multiple Sclerosis phenotypic subtypes.

Published in:

Annals of Clinical & Translational Neurology, 2020, v. 7, n. 4, p. 406, doi. 10.1002/acn3.51004

By:

Reynders, Tatjana;
Devolder, Lindsay;
Valles‐Colomer, Mireia;
Van Remoortel, Ann;
Joossens, Marie;
De Keyser, Jacques;
Nagels, Guy;
D'hooghe, Marie;
Raes, Jeroen

Publication type:

Article

Sputum Bacterial Metacommunities in Distinguishing Heterogeneity in Respiratory Health and Disease.

Published in:

Frontiers in Microbiology, 2022, v. 13, p. 1, doi. 10.3389/fmicb.2022.719541

By:

Si, Jiyeon;
Choi, Yongbin;
Raes, Jeroen;
Ko, Gwangpyo;
You, Hyun Ju

Publication type:

Article

Introducing insoluble wheat bran as a gut microbiota niche in an in vitro dynamic gut model stimulates propionate and butyrate production and induces colon region specific shifts in the luminal and mucosal microbial community.

Published in:

Environmental Microbiology, 2018, v. 20, n. 9, p. 3406, doi. 10.1111/1462-2920.14381

By:

De Paepe, Kim;
Verspreet, Joran;
Verbeke, Kristin;
Raes, Jeroen;
Courtin, Christophe M.;
Van de Wiele, Tom

Publication type:

Article

Effect of Mutant and Engineered High-Acetate-Producing Saccharomyces cerevisiae var. boulardii Strains in Dextran Sodium Sulphate-Induced Colitis.

Published in:

Nutrients, 2024, v. 16, n. 16, p. 2668, doi. 10.3390/nu16162668

By:

Deleu, Sara;
Jacobs, Inge;
Vazquez Castellanos, Jorge F.;
Verstockt, Sare;
Trindade de Carvalho, Bruna;
Subotić, Ana;
Verstockt, Bram;
Arnauts, Kaline;
Deprez, Lowie;
Vissers, Eva;
Lenfant, Matthias;
Vandermeulen, Greet;
De Hertogh, Gert;
Verbeke, Kristin;
Matteoli, Gianluca;
Huys, Geert R. B.;
Thevelein, Johan M.;
Raes, Jeroen;
Vermeire, Séverine

Publication type:

Article

A comparative analysis of the intestinal metagenomes present in guinea pigs (Cavia porcellus) and humans (Homo sapiens).

Published in:

BMC Genomics, 2012, v. 13, n. 1, p. 514, doi. 10.1186/1471-2164-13-514

By:

Hildebrand, Falk;
Ebersbach, Tine;
Bj�rn Nielsen, Henrik;
Xiaoping Li;
Brask Sonne, Si;
Bertalan, Marcelo;
Dimitrov, Peter;
Madsen, Lise;
Junjie Qin;
Jun Wang;
Raes, Jeroen;
Kristiansen, Karsten;
Rask Licht, Tine

Publication type:

Article

Towards microbial fermentation metabolites as markers for health benefits of prebiotics.

Published in:

Nutrition Research Reviews, 2015, v. 28, n. 1, p. 42, doi. 10.1017/S0954422415000037

By:

Verbeke, Kristin A.;
Boobis, Alan R.;
Chiodini, Alessandro;
Edwards, Christine A.;
Franck, Anne;
Kleerebezem, Michiel;
Nauta, Arjen;
Raes, Jeroen;
van Tol, Eric A. F.;
Tuohy, Kieran M.

Publication type:

Article

Brief Report: Dialister as a Microbial Marker of Disease Activity in Spondyloarthritis.

Published in:

Arthritis & Rheumatology, 2017, v. 69, n. 1, p. 114, doi. 10.1002/art.39802

By:

Tito, Raul Y.;
Cypers, Heleen;
Joossens, Marie;
Varkas, Gaëlle;
Van Praet, Liesbet;
Glorieus, Elien;
Van den Bosch, Filip;
De Vos, Martine;
Raes, Jeroen;
Elewaut, Dirk

Publication type:

Article

Clinical, gut microbial and neural effects of a probiotic add-on therapy in depressed patients: a randomized controlled trial.

Published in:

Translational Psychiatry, 2022, v. 12, n. 1, p. 1, doi. 10.1038/s41398-022-01977-z

By:

Schaub, Anna-Chiara;
Schneider, Else;
Vazquez-Castellanos, Jorge F.;
Schweinfurth, Nina;
Kettelhack, Cedric;
Doll, Jessica P. K.;
Yamanbaeva, Gulnara;
Mählmann, Laura;
Brand, Serge;
Beglinger, Christoph;
Borgwardt, Stefan;
Raes, Jeroen;
Schmidt, André;
Lang, Undine E.

Publication type:

Article

Temporal variability in quantitative human gut microbiome profiles and implications for clinical research.

Published in:

Nature Communications, 2021, v. 12, n. 1, p. 1, doi. 10.1038/s41467-021-27098-7

By:

Vandeputte, Doris;
De Commer, Lindsey;
Tito, Raul Y.;
Kathagen, Gunter;
Sabino, João;
Vermeire, Séverine;
Faust, Karoline;
Raes, Jeroen

Publication type:

Article

Revitalizing the Gut Microbiome in Chronic Kidney Disease: A Comprehensive Exploration of the Therapeutic Potential of Physical Activity.

Published in:

Toxins, 2024, v. 16, n. 6, p. 242, doi. 10.3390/toxins16060242

By:

Vandecruys, Marieke;
De Smet, Stefan;
De Beir, Jasmine;
Renier, Marie;
Leunis, Sofie;
Van Criekinge, Hanne;
Glorieux, Griet;
Raes, Jeroen;
Vanden Wyngaert, Karsten;
Nagler, Evi;
Calders, Patrick;
Monbaliu, Diethard;
Cornelissen, Véronique;
Evenepoel, Pieter;
Van Craenenbroeck, Amaryllis H.

Publication type:

Article

Integrated Metagenomics/Metaproteomics Reveals Human Host-Microbiota Signatures of Crohn's Disease.

Published in:

PLoS ONE, 2012, v. 7, n. 11, p. 1, doi. 10.1371/journal.pone.0049138

By:

Erickson, Alison R.;
Cantarel, Brandi L.;
Lamendella, Regina;
Darzi, Youssef;
Mongodin, Emmanuel F.;
Pan, Chongle;
Shah, Manesh;
Halfvarson, Jonas;
Tysk, Curt;
Henrissat, Bernard;
Raes, Jeroen;
Verberkmoes, Nathan C.;
Fraser, Claire M.;
Hettich, Robert L.;
Jansson, Janet K.

Publication type:

Article

Assessment of Metagenomic Assembly Using Simulated Next Generation Sequencing Data.

Published in:

PLoS ONE, 2012, v. 7, n. 2, p. 1, doi. 10.1371/journal.pone.0031386

By:

Mende, Daniel R.;
Waller, Alison S.;
Sunagawa, Shinichi;
Järvelin, Aino I.;
Chan, Michelle M.;
Arumugam, Manimozhiyan;
Raes, Jeroen;
Bork, Peer

Publication type:

Article

Universally Distributed Single-Copy Genes Indicate a Constant Rate of Horizontal Transfer.

Published in:

PLoS ONE, 2011, v. 6, n. 8, p. 1, doi. 10.1371/journal.pone.0022099

By:

Creevey, Christopher J.;
Doerks, Tobias;
Fitzpatrick, David A.;
Raes, Jeroen;
Bork, Peer

Publication type:

Article

A Nitrile Hydratase in the Eukaryote Monosiga brevicollis.

Published in:

PLoS ONE, 2008, v. 3, n. 12, p. 1, doi. 10.1371/journal.pone.0003976

By:

Foerstner, Konrad U.;
Doerks, Tobias;
Muller, Jean;
Raes, Jeroen;
Bork, Peer

Publication type:

Article

A Molecular Study of Microbe Transfer between Distant Environments.

Published in:

PLoS ONE, 2008, v. 3, n. 7, p. 1, doi. 10.1371/journal.pone.0002607

By:

Hooper, Sean D.;
Raes, Jeroen;
Foerstner, Konrad U.;
Harrington, Eoghan D.;
Dalevi, Daniel;
Bork, Peer

Publication type:

Article

Prediction and identification of sequences coding for orphan enzymes using genomic and metagenomic neighbours.

Published in:

Molecular Systems Biology, 2012, v. 8, n. 1, p. 1, doi. 10.1038/msb.2012.13

By:

Yamada, Takuji;
Waller, Alison S;
Raes, Jeroen;
Zelezniak, Aleksej;
Perchat, Nadia;
Perret, Alain;
Salanoubat, Marcel;
Patil, Kiran R;
Weissenbach, Jean;
Bork, Peer

Publication type:

Article

Toward molecular trait-based ecology through integration of biogeochemical, geographical and metagenomic data.

Published in:

Molecular Systems Biology, 2011, v. 7, n. 1, p. 1, doi. 10.1038/msb.2011.6

By:

Raes, Jeroen;
Letunic, Ivica;
Yamada, Takuji;
Jensen, Lars Juhl;
Bork, Peer

Publication type:

Article

Millimeter-scale genetic gradients and community-level molecular convergence in a hypersaline microbial mat.

Published in:

Molecular Systems Biology, 2008, v. 4, n. 1, p. 1, doi. 10.1038/msb.2008.35

By:

Kunin, Victor;
Raes, Jeroen;
Harris, J Kirk;
Spear, John R;
Walker, Jeffrey J;
Ivanova, Natalia;
von Mering, Christian;
Bebout, Brad M;
Pace, Norman R;
Bork, Peer;
Hugenholtz, Philip

Publication type:

Article

Decreasing the Crystallinity and Degree of Polymerization of Cellulose Increases Its Susceptibility to Enzymatic Hydrolysis and Fermentation by Colon Microbiota.

Published in:

Foods, 2023, v. 12, n. 5, p. 1100, doi. 10.3390/foods12051100

By:

Thielemans, Karel;
De Bondt, Yamina;
Comer, Luke;
Raes, Jeroen;
Everaert, Nadia;
Sels, Bert F.;
Courtin, Christophe M.

Publication type:

Article

Associations of HIV and iron status with gut microbiota composition, gut inflammation and gut integrity in South African school‐age children: a two‐way factorial case–control study.

Published in:

Journal of Human Nutrition & Dietetics, 2023, v. 36, n. 3, p. 819, doi. 10.1111/jhn.13171

By:

Goosen, Charlene;
Proost, Sebastian;
Baumgartner, Jeannine;
Mallick, Kashish;
Tito, Raul Y.;
Barnabas, Shaun L.;
Cotton, Mark F.;
Zimmermann, Michael B.;
Raes, Jeroen;
Blaauw, Renée

Publication type:

Article

Fire modifies the phylogenetic structure of soil bacterial co-occurrence networks.

Published in:

Environmental Microbiology, 2017, v. 19, n. 1, p. 317, doi. 10.1111/1462-2920.13609

By:

Pérez ‐ Valera, Eduardo;
Goberna, Marta;
Faust, Karoline;
Raes, Jeroen;
García, Carlos;
Verdú, Miguel

Publication type:

Article

Species-sorting and mass-transfer paradigms control managed natural metacommunities.

Published in:

Environmental Microbiology, 2016, v. 18, n. 12, p. 4862, doi. 10.1111/1462-2920.13402

By:

Günther, Susanne;
Faust, Karoline;
Schumann, Joachim;
Harms, Hauke;
Raes, Jeroen;
Müller, Susann

Publication type:

Article

Metagenomic 16S rDNA Illumina tags are a powerful alternative to amplicon sequencing to explore diversity and structure of microbial communities.

Published in:

Environmental Microbiology, 2014, v. 16, n. 9, p. 2659, doi. 10.1111/1462-2920.12250

By:

Logares, Ramiro;
Sunagawa, Shinichi;
Salazar, Guillem;
Cornejo ‐ Castillo, Francisco M.;
Ferrera, Isabel;
Sarmento, Hugo;
Hingamp, Pascal;
Ogata, Hiroyuki;
Vargas, Colomban;
Lima ‐ Mendez, Gipsi;
Raes, Jeroen;
Poulain, Julie;
Jaillon, Olivier;
Wincker, Patrick;
Kandels ‐ Lewis, Stefanie;
Karsenti, Eric;
Bork, Peer;
Acinas, Silvia G.

Publication type:

Article

Soil microbiome responses to the short-term effects of Amazonian deforestation.

Published in:

Molecular Ecology, 2015, v. 24, n. 10, p. 2433, doi. 10.1111/mec.13172

By:

Navarrete, Acacio A.;
Tsai, Siu M.;
Mendes, Lucas W.;
Faust, Karoline;
Hollander, Mattias;
Cassman, Noriko A.;
Raes, Jeroen;
Veen, Johannes A.;
Kuramae, Eiko E.

Publication type:

Article

Technical versus biological variability in a synthetic human gut community.

Published in:

Gut Microbes, 2023, v. 15, n. 1, p. 1, doi. 10.1080/19490976.2022.2155019

By:

van de Velde, Charlotte;
Joseph, Clémence;
Simoens, Kenneth;
Raes, Jeroen;
Bernaerts, Kristel;
Faust, Karoline

Publication type:

Article

Gut microbiome composition is associated with long-term disability worsening in multiple sclerosis.

Published in:

Gut Microbes, 2023, v. 15, n. 1, p. 1, doi. 10.1080/19490976.2023.2180316

By:

Devolder, Lindsay;
Pauwels, Ayla;
Van Remoortel, Ann;
Falony, Gwen;
Vieira-Silva, Sara;
Nagels, Guy;
De Keyser, Jacques;
Raes, Jeroen;
D’Hooghe, Marie B.

Publication type:

Article

Microbiota, not host origin drives ex vivo intestinal epithelial responses.

Published in:

Gut Microbes, 2022, v. 14, n. 1, p. 1, doi. 10.1080/19490976.2022.2089003

By:

Arnauts, Kaline;
Sudhakar, Padhmanand;
Verstockt, Sare;
Lapierre, Cynthia;
Potche, Selina;
Caenepeel, Clara;
Verstockt, Bram;
Raes, Jeroen;
Vermeire, Séverine;
Sabino, João;
Verfaillie, Catherine;
Ferrante, Marc

Publication type:

Article

Lactobacillus rhamnosus CNCM I-3690 decreases subjective academic stress in healthy adults: a randomized placebo-controlled trial.

Published in:

Gut Microbes, 2022, v. 14, n. 1, p. 1, doi. 10.1080/19490976.2022.2031695

By:

Wauters, Lucas;
Van Oudenhove, Luka;
Accarie, Alison;
Geboers, Karlien;
Geysen, Hannelore;
Toth, Joran;
Luypaerts, Anja;
Verbeke, Kristin;
Smokvina, Tamara;
Raes, Jeroen;
Tack, Jan;
Vanuytsel, Tim

Publication type:

Article

Multi-stability and the origin of microbial community types.

Published in:

ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2017, v. 11, n. 10, p. 2159, doi. 10.1038/ismej.2017.60

By:

Gonze, Didier;
Lahti, Leo;
Raes, Jeroen;
Faust, Karoline

Publication type:

Article

Correlation detection strategies in microbial data sets vary widely in sensitivity and precision.

Published in:

ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2016, v. 10, n. 7, p. 1669, doi. 10.1038/ismej.2015.235

By:

Weiss, Sophie;
Van Treuren, Will;
Lozupone, Catherine;
Faust, Karoline;
Friedman, Jonathan;
Deng, Ye;
Xia, Li Charlie;
Xu, Zhenjiang Zech;
Ursell, Luke;
Alm, Eric J;
Birmingham, Amanda;
Cram, Jacob A;
Fuhrman, Jed A;
Raes, Jeroen;
Sun, Fengzhu;
Zhou, Jizhong;
Knight, Rob

Publication type:

Article

Towards biome-specific analysis of meta-omics data.

Published in:

ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2016, v. 10, n. 5, p. 1025, doi. 10.1038/ismej.2015.188

By:

Darzi, Youssef;
Falony, Gwen;
Vieira-Silva, Sara;
Raes, Jeroen

Publication type:

Article

Exploring nucleo-cytoplasmic large DNA viruses in Tara Oceans microbial metagenomes.

Published in:

ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2013, v. 7, n. 9, p. 1678, doi. 10.1038/ismej.2013.59

By:

Hingamp, Pascal;
Grimsley, Nigel;
Acinas, Silvia G;
Clerissi, Camille;
Subirana, Lucie;
Poulain, Julie;
Ferrera, Isabel;
Sarmento, Hugo;
Villar, Emilie;
Lima-Mendez, Gipsi;
Faust, Karoline;
Sunagawa, Shinichi;
Claverie, Jean-Michel;
Moreau, Hervé;
Desdevises, Yves;
Bork, Peer;
Raes, Jeroen;
de Vargas, Colomban;
Karsenti, Eric;
Kandels-Lewis, Stefanie

Publication type:

Article

The chemical interactome space between the human host and the genetically defined gut metabotypes.

Published in:

ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2013, v. 7, n. 4, p. 730, doi. 10.1038/ismej.2012.141

By:

Jacobsen, Ulrik Plesner;
Nielsen, Henrik Bjørn;
Hildebrand, Falk;
Raes, Jeroen;
Sicheritz-Ponten, Thomas;
Kouskoumvekaki, Irene;
Panagiotou, Gianni

Publication type:

Article

The human small intestinal microbiota is driven by rapid uptake and conversion of simple carbohydrates.

Published in:

ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2012, v. 6, n. 7, p. 1415, doi. 10.1038/ismej.2011.212

By:

Zoetendal, Erwin G;
Raes, Jeroen;
van den Bogert, Bartholomeus;
Arumugam, Manimozhiyan;
Booijink, Carien CGM;
Troost, Freddy J;
Bork, Peer;
Wels, Michiel;
de Vos, Willem M;
Kleerebezem, Michiel

Publication type:

Article

Metformin induces weight loss associated with gut microbiota alteration in non-diabetic obese women: a randomized double-blind clinical trial.

Published in:

European Journal of Endocrinology, 2019, v. 180, n. 3, p. 165, doi. 10.1530/EJE-18-0826

By:

Ejtahed, Hanieh-Sadat;
Tito, Raul Y.;
Siadat, Seyed-Davar;
Hasani-Ranjbar, Shirin;
Hoseini-Tavassol, Zahra;
Rymenans, Leen;
Verbeke, Kristin;
Soroush, Ahmad-Reza;
Raes, Jeroen;
Larijani, Bagher

Publication type:

Article

IPED: a highly efficient denoising tool for Illumina MiSeq Paired-end 16S rRNA gene amplicon sequencing data.

Published in:

BMC Bioinformatics, 2016, v. 17, p. 1, doi. 10.1186/s12859-016-1061-2

By:

Mysara, Mohamed;
Leys, Natalie;
Raes, Jeroen;
Monsieurs, Pieter

Publication type:

Article

NoDe: a fast error-correction algorithm for pyrosequencing amplicon reads

Published in:

BMC Bioinformatics, 2015, v. 16, n. 1, p. 1, doi. 10.1186/s12859-015-0520-5

By:

Mysara, Mohamed;
Leys, Natalie;
Raes, Jeroen;
Monsieurs, Pieter

Publication type:

Article

Comparisons of gut microbiota profiles in wild-type and gelatinase B/matrix metalloproteinase-9-deficient mice in acute DSS-induced colitis.

Published in:

NPJ Biofilms & Microbiomes, 2018, v. 4, n. 1, p. N.PAG, doi. 10.1038/s41522-018-0059-0

By:

de Bruyn, Magali;
Sabino, João;
Vandeputte, Doris;
Vermeire, Séverine;
Raes, Jeroen;
Opdenakker, Ghislain

Publication type:

Article

Accumulation of Black Carbon Particles in Placenta, Cord Blood, and Childhood Urine in Association with the Intestinal Microbiome Diversity and Composition in Four- to Six-Year-Old Children in the ENVIRONAGE Birth Cohort.

Published in:

Environmental Health Perspectives, 2023, v. 131, n. 1, p. 017010-1, doi. 10.1289/EHP11257

By:

Van Pee, Thessa;
Hogervorst, Janneke;
Dockx, Yinthe;
Witters, Katrien;
Thijs, Sofie;
Congrong Wang;
Bongaerts, Eva;
Van Hamme, Jonathan D.;
Vangronsveld, Jaco;
Ameloot, Marcel;
Raes, Jeroen;
Nawrot, Tim S.

Publication type:

Article

A Holistic Approach to Marine Eco-Systems Biology.

Published in:

PLoS Biology, 2011, v. 9, n. 10, p. 1, doi. 10.1371/journal.pbio.1001177

By:

Karsenti, Eric;
Acinas, Silvia G.;
Bork, Peer;
Bowler, Chris;
De Vargas, Colomban;
Raes, Jeroen;
Sullivan, Matthew;
Arendt, Detlev;
Benzoni, Francesca;
Claverie, Jean-Michel;
Follows, Mick;
Gorsky, Gaby;
Hingamp, Pascal;
Iudicone, Daniele;
Jaillon, Olivier;
Kandels-Lewis, Stefanie;
Krzic, Uros;
Not, Fabrice;
Ogata, Hiroyuki;
Pesant, Stéphane

Publication type:

Article

Isolation of wheat bran-colonizing and metabolizing species from the human fecal microbiota.

Published in:

PeerJ, 2019, p. 1, doi. 10.7717/peerj.6293

By:

Kim De Paepe;
Verspreet, Joran;
Rezaei, Mohammad Naser;
Martinez, Silvia Hidalgo;
Meysman, Filip;
Van de Walle, Davy;
Dewettinck, Koen;
Raes, Jeroen;
Courtin, Christophe;
Van de Wiele, Tom

Publication type:

Article

Gut microbiota response to in vitro transit time variation is mediated by microbial growth rates, nutrient use efficiency and adaptation to in vivo transit time.

Published in:

Microbiome, 2023, v. 11, n. 1, p. 1, doi. 10.1186/s40168-023-01691-y

By:

Minnebo, Yorick;
Delbaere, Karen;
Goethals, Valerie;
Raes, Jeroen;
Van de Wiele, Tom;
De Paepe, Kim

Publication type:

Article