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Simultaneous enumeration of cancer and immune cell types from bulk tumor gene expression data.
Published in:
eLife, 2017, p. 1, doi. 10.7554/eLife.26476.001
By:
- Racle, Julien;
- de Jonge, Kaat;
- Baumgaertner, Petra;
- Speiser, Daniel E.;
- Gfeller, David
Publication type:
Article
Robust prediction of HLA class II epitopes by deep motif deconvolution of immunopeptidomes.
Published in:
Nature Biotechnology, 2019, v. 37, n. 11, p. 1283, doi. 10.1038/s41587-019-0289-6
By:
- Racle, Julien;
- Michaux, Justine;
- Rockinger, Georg Alexander;
- Arnaud, Marion;
- Bobisse, Sara;
- Chong, Chloe;
- Guillaume, Philippe;
- Coukos, George;
- Harari, Alexandre;
- Jandus, Camilla;
- Bassani-Sternberg, Michal;
- Gfeller, David
Publication type:
Article
Dynamic Impacts of the Inhibition of the Molecular Chaperone Hsp90 on the T-Cell Proteome Have Implications for Anti-Cancer Therapy.
Published in:
PLoS ONE, 2013, v. 8, n. 11, p. 1, doi. 10.1371/journal.pone.0080425
By:
- Fierro-Monti, Ivo;
- Echeverria, Pablo;
- Racle, Julien;
- Hernandez, Celine;
- Picard, Didier;
- Quadroni, Manfredo
Publication type:
Article
A Novel Pulse-Chase SILAC Strategy Measures Changes in Protein Decay and Synthesis Rates Induced by Perturbation of Proteostasis with an Hsp90 Inhibitor.
Published in:
PLoS ONE, 2013, v. 8, n. 11, p. 1, doi. 10.1371/journal.pone.0080423
By:
- Fierro-Monti, Ivo;
- Racle, Julien;
- Hernandez, Celine;
- Waridel, Patrice;
- Hatzimanikatis, Vassily;
- Quadroni, Manfredo
Publication type:
Article
A computational framework for the design of optimal protein synthesis.
Published in:
Biotechnology & Bioengineering, 2012, v. 109, n. 8, p. 2127, doi. 10.1002/bit.24463
By:
- Racle, Julien;
- Overney, Jan;
- Hatzimanikatis, Vassily
Publication type:
Article
A Phase Ib Study of the Combination of Personalized Autologous Dendritic Cell Vaccine, Aspirin, and Standard of Care Adjuvant Chemotherapy Followed by Nivolumab for Resected Pancreatic Adenocarcinoma—A Proof of Antigen Discovery Feasibility in Three Patients
Published in:
Frontiers in Immunology, 2019, p. 1, doi. 10.3389/fimmu.2019.01832
By:
- Bassani-Sternberg, Michal;
- Digklia, Antonia;
- Huber, Florian;
- Wagner, Dorothea;
- Sempoux, Christine;
- Stevenson, Brian J.;
- Thierry, Anne-Christine;
- Michaux, Justine;
- Pak, HuiSong;
- Racle, Julien;
- Boudousquie, Caroline;
- Balint, Klara;
- Coukos, George;
- Gfeller, David;
- Martin Lluesma, Silvia;
- Harari, Alexandre;
- Demartines, Nicolas;
- Kandalaft, Lana E.
Publication type:
Article
Robust estimation of cancer and immune cell-type proportions from bulk tumor ATAC-Seq data.
Published in:
eLife, 2024, p. 1, doi. 10.7554/eLife.94833
By:
- Gabriel, Aurélie Anne-Gaëlle;
- Racle, Julien;
- Falquet, Maryline;
- Jandus, Camilla;
- Gfeller, David
Publication type:
Article
A Genome-Scale Integration and Analysis of <i>Lactococcus lactis</i> Translation Data.
Published in:
PLoS Computational Biology, 2013, v. 9, n. 10, p. 1, doi. 10.1371/journal.pcbi.1003240
By:
- Racle, Julien;
- Picard, Flora;
- Girbal, Laurence;
- Cocaign-Bousquet, Muriel;
- Hatzimanikatis, Vassily
Publication type:
Article
ILC2-modulated T cell-to-MDSC balance is associated with bladder cancer recurrence.
Published in:
2017
By:
- Chevalier, Mathieu F.;
- Trabanelli, Sara;
- Racle, Julien;
- Salomé, Bérengère;
- Cesson, Valérie;
- Gharbi, Dalila;
- Bohner, Perrine;
- Domingos-Pereira, Sonia;
- Dartiguenave, Florence;
- Fritschi, Anne-Sophie;
- Speiser, Daniel E.;
- Rentsch, Cyrill A.;
- Gfeller, David;
- Jichlinski, Patrice;
- Nardelli-Haefliger, Denise;
- Jandus, Camilla;
- Derré, Laurent
Publication type:
journal article
Personalized cancer vaccine effectively mobilizes antitumor T cell immunity in ovarian cancer.
Published in:
Science Translational Medicine, 2018, v. 10, n. 436, p. 1, doi. 10.1126/scitranslmed.aao5931
By:
- Tanyi, Janos L.;
- Bobisse, Sara;
- Ophir, Eran;
- Tuyaerts, Sandra;
- Roberti, Annalisa;
- Genolet, Raphael;
- Baumgartner, Petra;
- Stevenson, Brian J.;
- Iseli, Christian;
- Dangaj, Denarda;
- Czerniecki, Brian;
- Semilietof, Aikaterini;
- Racle, Julien;
- Michel, Alexandra;
- Xenarios, Ioannis;
- Chiang, Cheryl;
- Monos, Dimitri S.;
- Torigian, Drew A.;
- Nisenbaum, Harvey L.;
- Michielin, Olivier
Publication type:
Article
MHC Motif Atlas: a database of MHC binding specificities and ligands.
Published in:
Nucleic Acids Research, 2023, v. 51, n. D1, p. D428, doi. 10.1093/nar/gkac965
By:
- Tadros, Daniel M;
- Eggenschwiler, Simon;
- Racle, Julien;
- Gfeller, David
Publication type:
Article
Sensitive and frequent identification of high avidity neo-epitope specific CD8<sup>+</sup>T cells in immunotherapy-naive ovarian cancer.
Published in:
Nature Communications, 2018, v. 9, n. 1, p. 1, doi. 10.1038/s41467-018-03301-0
By:
- Bobisse, Sara;
- Genolet, Raphael;
- Roberti, Annalisa;
- Tanyi, Janos L.;
- Racle, Julien;
- Stevenson, Brian J.;
- Iseli, Christian;
- Michel, Alexandra;
- Le Bitoux, Marie-Aude;
- Guillaume, Philippe;
- Schmidt, Julien;
- Bianchi, Valentina;
- Dangaj, Denarda;
- Fenwick, Craig;
- Derré, Laurent;
- Xenarios, Ioannis;
- Michielin, Olivier;
- Romero, Pedro;
- Monos, Dimitri S.;
- Zoete, Vincent
Publication type:
Article
Tumour-derived PGD2 and NKp30-B7H6 engagement drives an immunosuppressive ILC2-MDSC axis.
Published in:
Nature Communications, 2017, v. 8, n. 1, p. 1, doi. 10.1038/s41467-017-00678-2
By:
- Trabanelli, Sara;
- Chevalier, Mathieu F.;
- Martinez-Usatorre, Amaia;
- Gomez-Cadena, Alejandra;
- Salomé, Bérengère;
- Lecciso, Mariangela;
- Salvestrini, Valentina;
- Verdeil, Grégory;
- Racle, Julien;
- Papayannidis, Cristina;
- Morita, Hideaki;
- Pizzitola, Irene;
- Grandclément, Camille;
- Bohner, Perrine;
- Bruni, Elena;
- Girotra, Mukul;
- Pallavi, Rani;
- Falvo, Paolo;
- Leibundgut, Elisabeth Oppliger;
- Baerlocher, Gabriela M.
Publication type:
Article

Found: 13