Works by Rabinowicz, Pablo D

Results: 19

Sorghum Genome Sequencing by Methylation Filtration.

Published in:

PLoS Biology, 2005, v. 3, n. 1, p. 1, doi. 10.1371/journal.pbio.0030013

By:

Bedell, Joseph A;
Budiman, Muhammad A;
Nunberg, Andrew;
Citek, Robert W;
Robbins, Dan;
Jones, Joshua;
Flick, Elizabeth;
Rohlfing, Theresa;
Fries, Jason;
Bradford, Kourtney;
McMenamy, Jennifer;
Smith, Michael;
Holeman, Heather;
Roe, Bruce A;
Wiley, Graham;
Korf, Ian F;
Rabinowicz, Pablo D;
Lakey, Nathan;
McCombie, W. Richard;
Jeddeloh, Jeffrey A

Publication type:

Article

Sorghum Genome Sequencing by Methylation Filtration.

Published in:

PLoS Biology, 2005, v. 3, n. 1, p. 103, doi. 10.1371/journal.pbio.0030013

By:

Bedell, Joseph A.;
Budiman, Muhammad A.;
Nunberg, Andrew;
Citek, Robert W.;
Robbins, Dan;
Jones, Joshua;
Flick, Elizabeth;
Rohlfing, Theresa;
Fries, Jason;
Bradford, Kourtney;
McMenamy, Jennifer;
Smith, Michael;
Holeman, Heather;
Roe, Bruce A.;
Wiley, Graham;
Korf, Ian F.;
Rabinowicz, Pablo D.;
Lakey, Nathan;
McCombie, W. Richard;
Jeddeloh, Jeffrey A.

Publication type:

Article

The TIGR Plant Transcript Assemblies database.

Published in:

Nucleic Acids Research, 2007, v. 35, p. d846, doi. 10.1093/nar/gkl785

By:

Childs, Kevin L.;
Hamilton, John P.;
Zhu, Wei;
Ly, Eugene;
Cheung, Foo;
Wu, Hank;
Rabinowicz, Pablo D.;
Town, Chris D.;
Buell, C. Robin;
Chan, Agnes P.

Publication type:

Article

The TIGR Maize Database.

Published in:

Nucleic Acids Research, 2006, v. 34, n. suppl 1, p. d771, doi. 10.1093/nar/gkj072

By:

Chan, Agnes P.;
Pertea, Geo;
Cheung, Foo;
Lee, Dan;
Zheng, Li;
Whitelaw, Cathy;
Pontaroli, Ana C.;
SanMiguel, Phillip;
Yuan, Yinan;
Bennetzen, Jeffrey;
Barbazuk, William Brad;
Quackenbush, John;
Rabinowicz, Pablo D.

Publication type:

Article

Differential methylation of genes and retrotransposons facilitates shotgun sequencing of the maize genome.

Published in:

Nature Genetics, 1999, v. 23, n. 3, p. 305, doi. 10.1038/15479

By:

Rabinowicz, Pablo D.;
Schutz, Kristin;
Dedhia, Neilay;
Yordan, Cristina;
Parnell, Laurence D.;
Stein, Lincoln;
McCombie, W. Richard;
Martienssen, Robert A.

Publication type:

Article

Arabidopsis thaliana Chromosome 4 Replicates in Two Phases That Correlate with Chromatin State.

Published in:

PLoS Genetics, 2010, v. 6, n. 6, p. 1, doi. 10.1371/journal.pgen.1000982

By:

Tae-Jin Lee;
Pascuzzi, Pete E.;
Settlage, Sharon B.;
Shultz, Randall W.;
Tanurdzic, Milos;
Rabinowicz, Pablo D.;
Menges, Margit;
Ping Zheng;
Main, Dorrie;
Murray, James A. H.;
Sosinski, Bryon;
Allen, George C.;
Martienssen, Robert A.;
Hanley-Bowdoin, Linda;
Vaughn, Matthew W.;
Thompson, William F.

Publication type:

Article

A novel reverse-genetic approach (SIMF) identifies Mutator insertions in new Myb genes.

Published in:

Planta: An International Journal of Plant Biology, 2000, v. 211, n. 6, p. 887, doi. 10.1007/s004250000402

By:

Rabinowicz, Pablo D.;
Grotewold, Erich

Publication type:

Article

Chromosome arm-specific BAC end sequences permit comparative analysis of homoeologous chromosomes and genomes of polyploid wheat.

Published in:

BMC Plant Biology, 2012, v. 12, n. 1, p. 64, doi. 10.1186/1471-2229-12-64

By:

Sehgal, Sunish K.;
Wanlong Li;
Rabinowicz, Pablo D.;
Chan, Agnes;
Šimkov , Hana;
Doležel, Jaroslav;
Gill, Bikram S.

Publication type:

Article

Single nucleotide polymorphisms for assessing genetic diversity in castor bean (Ricinus communis).

Published in:

BMC Plant Biology, 2010, v. 10, p. 13, doi. 10.1186/1471-2229-10-13

By:

Foster, Jeffrey T.;
Allan, Gerard J.;
Chan, Agnes P.;
Rabinowicz, Pablo D.;
Ravel, Jacques;
Jackson, Paul J.;
Keim, Paul

Publication type:

Article

Reduced representation sequencing: a success in maize and a promise for other plant genomes.

Published in:

BioEssays, 2005, v. 27, n. 8, p. 839, doi. 10.1002/bies.20262

By:

Barbazuk, W. Brad;
Bedell, Joseph A.;
Rabinowicz, Pablo D.

Publication type:

Article

Cassava genome from a wild ancestor to cultivated varieties.

Published in:

Nature Communications, 2014, v. 5, n. 10, p. 5110, doi. 10.1038/ncomms6110

By:

Wenquan Wang;
Binxiao Feng;
Jingfa Xiao;
Zhiqiang Xia;
Xincheng Zhou;
Pinghua Li;
Weixiong Zhang;
Ying Wang;
Lindberg Møller, Birger;
Peng Zhang;
Ming-Cheng Luo;
Gong Xiao;
Jingxing Liu;
Jun Yang;
Songbi Chen;
Rabinowicz, Pablo D.;
Xin Chen;
Hong-Bin Zhang;
Ceballos, Henan;
Qunfeng Lou

Publication type:

Article

Corrigendum: Insights into the role of DNA methylation in diatoms by genome-wide profiling in Phaeodactylum tricornutum.

Published in:

Nature Communications, 2014, v. 5, n. 1, p. 3028, doi. 10.1038/ncomms4028

By:

Veluchamy, Alaguraj;
Lin, Xin;
Maumus, Florian;
Rivarola, Maximo;
Bhavsar, Jaysheel;
Creasy, Todd;
O'Brien, Kimberly;
Sengamalay, Naomi A.;
Tallon, Luke J.;
Smith, Andrew D.;
Rayko, Edda;
Ahmed, Ikhlak;
Crom, Stéphane Le;
Farrant, Gregory K.;
Sgro, Jean-Yves;
Olson, Sue A.;
Bondurant, Sandra Splinter;
Allen, Andrew E.;
Rabinowicz, Pablo D.;
Sussman, Michael R.

Publication type:

Article

Insights into the role of DNA methylation in diatoms by genome-wide profiling in Phaeodactylum tricornutum.

Published in:

Nature Communications, 2013, v. 4, n. 7, p. 2091, doi. 10.1038/ncomms3091

By:

Veluchamy, Alaguraj;
Lin, Xin;
Maumus, Florian;
Rivarola, Maximo;
Bhavsar, Jaysheel;
Creasy, Todd;
O'Brien, Kimberly;
Sengamalay, Naomi A.;
Tallon, Luke J.;
Smith, Andrew D.;
Rayko, Edda;
Ahmed, Ikhlak;
Crom, Stéphane Le;
Farrant, Gregory K.;
Sgro, Jean-Yves;
Olson, Sue A.;
Bondurant, Sandra Splinter;
Allen, Andrew;
Rabinowicz, Pablo D.;
Sussman, Michael R.

Publication type:

Article

An integrative analysis of post-translational histone modifications in the marine diatom Phaeodactylum tricornutum.

Published in:

Genome Biology, 2015, v. 16, n. 1, p. 102, doi. 10.1186/s13059-015-0671-8

By:

Veluchamy, Alaguraj;
Rastogi, Achal;
Xin Lin;
Lombard, Bérangère;
Murik, Omer;
Thomas, Yann;
Dingli, Florent;
Rivarola, Maximo;
Ott, Sandra;
Xinyue Liu;
Sun, Yezhou;
Rabinowicz, Pablo D.;
McCarthy, James;
Allen, Andrew E.;
Loew, Damarys;
Bowler, Chris;
Tirichine, Leïla

Publication type:

Article

Maize R2R3 Myb genes: Sequence analysis reveals amplification in the higher plants.

Published in:

Genetics, 1999, v. 153, n. 1, p. 427, doi. 10.1093/genetics/153.1.427

By:

Rabinowicz, Pablo D.;
Braun, Edward L.

Publication type:

Article

Castor Bean Organelle Genome Sequencing and Worldwide Genetic Diversity Analysis.

Published in:

PLoS ONE, 2011, v. 6, n. 7, p. 1, doi. 10.1371/journal.pone.0021743

By:

Rivarola, Maximo;
Foster, Jeffrey T.;
Chan, Agnes P.;
Williams, Amber L.;
Rice, Danny W.;
Xinyue Liu;
Melake-Berhan, Admasu;
Creasy, Heather Huot;
Puiu, Daniela;
Rosovitz, M. J.;
Khouri, Hoda M.;
Beckstrom-Sternberg, Stephen M.;
Allan, Gerard J.;
Keim, Paul;
Ravel, Jacques;
Rabinowicz, Pablo D.

Publication type:

Article

Draft genome sequence of the oilseed species Ricinus communis.

Published in:

Nature Biotechnology, 2010, v. 28, n. 9, p. 951, doi. 10.1038/nbt.1674

By:

Chan, Agnes P.;
Crabtree, Jonathan;
Zhao, Qi;
Lorenzi, Hernan;
Orvis, Joshua;
Puiu, Daniela;
Melake-Berhan, Admasu;
Jones, Kristine M.;
Redman, Julia;
Chen, Grace;
Cahoon, Edgar B.;
Gedil, Melaku;
Stanke, Mario;
Haas, Brian J.;
Wortman, Jennifer R.;
Fraser-Liggett, Claire M.;
Ravel, Jacques;
Rabinowicz, Pablo D.

Publication type:

Article

The highest-copy repeats are methylated in the small genome of the early divergent vascular plant Selaginella moellendorffii.

Published in:

BMC Genomics, 2008, v. 9, p. 1, doi. 10.1186/1471-2164-9-282

By:

Chan, Agnes P.;
Melake-Berhan, Admasu;
O'Brien, Kimberly;
Buckley, Stephanie;
Hui Quan;
Chen, Dan;
Lewis, Matthew;
Banks, Jo Ann;
Rabinowicz, Pablo D.

Publication type:

Article

Genome sequence and rapid evolution of the rice pathogen Xanthomonas oryzae pv. oryzae PXO99<sup>A</sup>.

Published in:

BMC Genomics, 2008, v. 9, p. 1, doi. 10.1186/1471-2164-9-204

By:

Salzberg, Steven L.;
Sommer, Daniel D.;
Schatz, Michael C.;
Phillippy, Adam M.;
Rabinowicz, Pablo D.;
Tsuge, Seiji;
Furutani, Ayako;
Ochiai, Hirokazu;
Delcher, Arthur L.;
Kelley, David;
Madupu, Ramana;
Puiu, Daniela;
Radune, Diana;
Shumway, Martin;
Trapnell, Cole;
Aparna, Gudlur;
Jha, Gopaljee;
Pandey, Alok;
Patil, Prabhu B.;
Ishihara, Hiromichi

Publication type:

Article