Works by Rödiger, Stefan

Results: 43

Preface to the Special Issue on PCR on chip and related technologies.

Published in:

2014

By:

Mirsky, Vladimir;
Rödiger, Stefan;
Schierack, Peter;
Roggenbuck, Dirk

Publication type:

Editorial

Nucleic acid detection based on the use of microbeads: a review.

Published in:

Microchimica Acta, 2014, v. 181, n. 11/12, p. 1151, doi. 10.1007/s00604-014-1243-4

By:

Rödiger, Stefan;
Liebsch, Claudia;
Schmidt, Carsten;
Lehmann, Werner;
Resch-Genger, Ute;
Schedler, Uwe;
Schierack, Peter

Publication type:

Article

Genotyping of familial Mediterranean fever gene (MEFV)—Single nucleotide polymorphism—Comparison of Nanopore with conventional Sanger sequencing.

Published in:

PLoS ONE, 2022, v. 17, n. 3, p. 1, doi. 10.1371/journal.pone.0265622

By:

Schmidt, Jonas;
Berghaus, Sandro;
Blessing, Frithjof;
Herbeck, Holger;
Blessing, Josef;
Schierack, Peter;
Rödiger, Stefan;
Roggenbuck, Dirk;
Wenzel, Folker

Publication type:

Article

MicroRNA biomarkers as next-generation diagnostic tools for neurodegenerative diseases: a comprehensive review.

Published in:

Frontiers in Molecular Neuroscience, 2024, p. 01, doi. 10.3389/fnmol.2024.1386735

By:

Husnain Azam, Hafiz Muhammad;
Ilse Rößling, Rosa;
Geithe, Christiane;
Moman Khan, Muhammad;
Dinter, Franziska;
Hanack, Katja;
Prüß, Harald;
Husse, Britta;
Roggenbuck, Dirk;
Schierack, Peter;
Rödiger, Stefan

Publication type:

Article

Applications of Neural Networks in Biomedical Data Analysis.

Published in:

Biomedicines, 2022, v. 10, n. 7, p. N.PAG, doi. 10.3390/biomedicines10071469

By:

Weiss, Romano;
Karimijafarbigloo, Sanaz;
Roggenbuck, Dirk;
Rödiger, Stefan

Publication type:

Article

An explorative study of polymers for 3D printing of bioanalytical test systems.

Published in:

Clinical Hemorheology & Microcirculation, 2020, v. 75, n. 1, p. 57, doi. 10.3233/CH-190713

By:

Jurischka, Christoph;
Dinter, Franziska;
Efimova, Anastasia;
Weiss, Romano;
Schiebel, Juliane;
Schulz, Christian;
Fayziev, Bekzodjon;
Schierack, Peter;
Fischer, Thomas;
Rödiger, Stefan

Publication type:

Article

Second generation analysis of antinuclear antibody (ANA) by combination of screening and confirmatory testing.

Published in:

Clinical Chemistry & Laboratory Medicine, 2015, v. 53, n. 12, p. 1991, doi. 10.1515/cclm-2015-0083

By:

Scholz, Juliane;
Grossmann, Kai;
Knütter, Ilka;
Hiemann, Rico;
Sowa, Mandy;
Röber, Nadja;
Rödiger, Stefan;
Schierack, Peter;
Reinhold, Dirk;
Bogdanos, Dimitrios P.;
Meroni, Pier Luigi;
Radice, Antonella;
Conrad, Karsten;
Roggenbuck, Dirk

Publication type:

Article

LoopTag FRET Probe System for Multiplex qPCR Detection of Borrelia Species.

Published in:

Life (2075-1729), 2021, v. 11, n. 11, p. 1163, doi. 10.3390/life11111163

By:

Hanschmann, Henning;
Rödiger, Stefan;
Kramer, Toni;
Hanschmann, Katrin;
Steidle, Michael;
Fingerle, Volker;
Schmidt, Carsten;
Lehmann, Werner;
Schierack, Peter

Publication type:

Article

Intestinal E scherichia coli colonization in a mallard duck population over four consecutive winter seasons.

Published in:

Environmental Microbiology, 2015, v. 17, n. 9, p. 3352, doi. 10.1111/1462-2920.12807

By:

Rödiger, Stefan;
Kramer, Toni;
Frömmel, Ulrike;
Weinreich, Jörg;
Roggenbuck, Dirk;
Guenther, Sebastian;
Schaufler, Katharina;
Schröder, Christian;
Schierack, Peter

Publication type:

Article

Over-Expression of LEDGF/p75 in HEp-2 Cells Enhances Autoimmune IgG Response in Patients with Benign Prostatic Hyperplasia—A Novel Diagnostic Approach with Therapeutic Consequence?

Published in:

International Journal of Molecular Sciences, 2023, v. 24, n. 7, p. 6166, doi. 10.3390/ijms24076166

By:

Liedtke, Victoria;
Rose, Laura;
Hiemann, Rico;
Nasser, Abdullah;
Rödiger, Stefan;
Bonaventura, Alena;
Winkler, Laura;
Sowa, Mandy;
Stöckle, Michael;
Schierack, Peter;
Junker, Kerstin;
Roggenbuck, Dirk

Publication type:

Article

Novel Anti Double-Stranded Nucleic Acids Full-Length Recombinant Camelid Heavy-Chain Antibody for the Detection of miRNA.

Published in:

International Journal of Molecular Sciences, 2022, v. 23, n. 11, p. 6275, doi. 10.3390/ijms23116275

By:

Czarnecka, Malgorzata;
Weichelt, Ulrike;
Rödiger, Stefan;
Hanack, Katja

Publication type:

Article

LEDGF/p75 Is Required for an Efficient DNA Damage Response.

Published in:

International Journal of Molecular Sciences, 2021, v. 22, n. 11, p. 5866, doi. 10.3390/ijms22115866

By:

Liedtke, Victoria;
Schröder, Christian;
Roggenbuck, Dirk;
Weiss, Romano;
Stohwasser, Ralf;
Schierack, Peter;
Rödiger, Stefan;
Schenk, Lysann

Publication type:

Article

Proteomic Screening for Prediction and Design of Antimicrobial Peptides with AmpGram.

Published in:

International Journal of Molecular Sciences, 2020, v. 21, n. 12, p. 4310, doi. 10.3390/ijms21124310

By:

Burdukiewicz, Michał;
Sidorczuk, Katarzyna;
Rafacz, Dominik;
Pietluch, Filip;
Chilimoniuk, Jarosław;
Rödiger, Stefan;
Gagat, Przemysław

Publication type:

Article

Benchmarks in antimicrobial peptide prediction are biased due to the selection of negative data.

Published in:

Briefings in Bioinformatics, 2022, v. 23, n. 5, p. 1, doi. 10.1093/bib/bbac343

By:

Sidorczuk, Katarzyna;
Gagat, Przemysław;
Pietluch, Filip;
Kała, Jakub;
Rafacz, Dominik;
Bąkała, Laura;
Słowik, Jadwiga;
Kolenda, Rafał;
Rödiger, Stefan;
Fingerhut, Legana C H W;
Cooke, Ira R;
Mackiewicz, Paweł;
Burdukiewicz, Michał

Publication type:

Article

Natural phenolic compounds as biofilm inhibitors of multidrug-resistant Escherichia coli - the role of similar biological processes despite structural diversity.

Published in:

Frontiers in Microbiology, 2023, p. 01, doi. 10.3389/fmicb.2023.1232039

By:

Buchmann, David;
Schwabe, Michael;
Weiss, Romano;
Kuss, Andreas W.;
Schaufler, Katharina;
Schlüter, Rabea;
Rödiger, Stefan;
Guenther, Sebastian;
Schultze, Nadin

Publication type:

Article

New Platform Technology for Comprehensive Serological Diagnostics of Autoimmune Diseases.

Published in:

Clinical & Developmental Immunology, 2012, p. 1, doi. 10.1155/2012/284740

By:

Willitzki, Annika;
Hiemann, Rico;
Peters, Vanessa;
Sack, Ulrich;
Schierack, Peter;
Rödiger, Stefan;
Anderer, Ursula;
Conrad, Karsten;
Bogdanos, Dimitrios P.;
Reinhold, Dirk;
Roggenbuck, Dirk

Publication type:

Article

Enabling reproducible real-time quantitative PCR research: the RDML package.

Published in:

Bioinformatics, 2017, v. 33, n. 24, p. 4012, doi. 10.1093/bioinformatics/btx528

By:

Rödiger, Stefan;
Burdukiewicz, Michał;
Spiess, Andrej-Nikolai;
Blagodatskikh, Konstantin

Publication type:

Article

chipPCR: an R package to pre-process raw data of amplification curves.

Published in:

Bioinformatics, 2015, v. 31, n. 17, p. 2900, doi. 10.1093/bioinformatics/btv205

By:

Rödiger, Stefan;
Burdukiewicz, Michał;
Schierack, Peter

Publication type:

Article

Der CytoBead-Assay - Eine neue Möglichkeit der multiparametrischen Autoantikörperanalytik bei systemischen Autoimmunerkrankungen The CytoBead assay - a novel kind of multiparametric autoantibody analysis in the diagnostics of systemic...

Published in:

2014

By:

Sowa, Mandy;
Großmann, Kai;
Scholz, Juliane;
Röber, Nadja;
Rödiger, Stefan;
Schierack, Peter;
Conrad, Karsten;
Roggenbuck, Dirk;
Hiemann, Rico

Publication type:

Journal Article

Der CytoBead-Assay - Eine neue Möglichkeit der multiparametrischen Autoantikörperanalytik bei systemischen Autoimmunerkrankungen The CytoBead assay - a novel kind of multiparametric autoantibody analysis in the diagnostics of systemic autoimmune diseases

Published in:

Journal of Laboratory Medicine / Laboratoriums Medizin, 2014, v. 38, n. 6, p. 309, doi. 10.1515/labmed-2014-0041

By:

Sowa, Mandy;
Großmann, Kai;
Scholz, Juliane;
Röber, Nadja;
Rödiger, Stefan;
Schierack, Peter;
Conrad, Karsten;
Roggenbuck, Dirk;
Hiemann, Rico

Publication type:

Article

The CytoBead assay – a novel approach of multiparametric autoantibody analysis in the diagnostics of systemic autoimmune diseases.

Published in:

Journal of Laboratory Medicine / Laboratoriums Medizin, 2014, p. 1, doi. 10.1515/labmed-2015-0036

By:

Sowa, Mandy;
Großmann, Kai;
Scholz, Juliane;
Röber, Nadja;
Rödiger, Stefan;
Schierack, Peter;
Conrad, Karsten;
Roggenbuck, Dirk;
Hiemann, Rico

Publication type:

Article

A new reporter design based on DNA origami nanostructures for quantification of short oligonucleotides using microbeads.

Published in:

Scientific Reports, 2019, v. 9, n. 1, p. 1, doi. 10.1038/s41598-019-41136-x

By:

Choi, Youngeun;
Schmidt, Carsten;
Tinnefeld, Philip;
Bald, Ilko;
Rödiger, Stefan

Publication type:

Article

Serological and viral genetic features of patients with COVID-19 in a selected German patient cohort—correlation with disease characteristics.

Published in:

GeroScience, 2021, v. 43, n. 5, p. 2249, doi. 10.1007/s11357-021-00443-w

By:

Schmidt, Jonas;
Berghaus, Sandro;
Blessing, Frithjof;
Wenzel, Folker;
Herbeck, Holger;
Blessing, Josef;
Schierack, Peter;
Rödiger, Stefan;
Roggenbuck, Dirk

Publication type:

Article

Fully automated viability and toxicity screening—A reliable all‐in‐one attempt.

Published in:

Cancer Medicine, 2024, v. 13, n. 12, p. 1, doi. 10.1002/cam4.7392

By:

Liedtke, Victoria;
Weiss, Romano;
Skifov, Anastasia;
Rödiger, Stefan;
Schenk, Lysann

Publication type:

Article

Identification of Chitinase-3-Like Protein 1 as a Novel Neutrophil Antigenic Target in Crohn's Disease.

Published in:

Journal of Crohn's & Colitis, 2019, v. 13, n. 7, p. 894, doi. 10.1093/ecco-jcc/jjz012

By:

Deutschmann, Claudia;
Sowa, Mandy;
Murugaiyan, Jayaseelan;
Roesler, Uwe;
Röber, Nadja;
Conrad, Karsten;
Laass, Martin W;
Bogdanos, Dimitrios;
Sipeki, Nora;
Papp, Maria;
Rödiger, Stefan;
Roggenbuck, Dirk;
Schierack, Peter

Publication type:

Article

MIQE 2.0: Revision of the Minimum Information for Publication of Quantitative Real-Time PCR Experiments Guidelines Free.

Published in:

Clinical Chemistry, 2025, v. 71, n. 6, p. 634, doi. 10.1093/clinchem/hvaf043

By:

Bustin, Stephen A;
Ruijter, Jan M;
Hoff, Maurice J B van den;
Kubista, Mikael;
Pfaffl, Michael W;
Shipley, Gregory L;
Tran, Nham;
Rödiger, Stefan;
Untergasser, Andreas;
Mueller, Reinhold;
Nolan, Tania;
Milavec, Mojca;
Burns, Malcolm J;
Huggett, Jim F;
Vandesompele, Jo;
Wittwer, Carl T

Publication type:

Article

Impact of Smoothing on Parameter Estimation in Quantitative DNA Amplification Experiments.

Published in:

Clinical Chemistry, 2015, v. 61, n. 2, p. 379, doi. 10.1373/clinchem.2014.230656

By:

Spiess, Andrej-Nikolai;
Deutschmann, Claudia;
Burdukiewicz, Michał;
Himmelreich, Ralf;
Klat, Katharina;
Schierack, Peter;
Rödiger, Stefan

Publication type:

Article

Conference Report: Why R? 2019.

Published in:

R Journal, 2020, v. 12, n. 1, p. 484

By:

Burdukiewicz, Michał;
Pietluch, Filip;
Chilimoniuk, Jarosław;
Sidorczuk, Katarzyna;
Rafacz, Dominik;
Jessen, Leon Eyrich;
Rödiger, Stefan;
Kosiński, Marcin;
Wójcik, Piotr

Publication type:

Article

Conference Report: Why R? 2018.

Published in:

R Journal, 2018, v. 10, n. 2, p. 572

By:

Burdukiewicz, Michał;
Karas, Marta;
Jessen, Leon Eyrich;
Kosiński, Marcin;
Bischl, Bernd;
Rödiger, Stefan

Publication type:

Article

R as an Environment for Reproducible Analysis of DNA Amplification Experiments.

Published in:

R Journal, 2015, v. 7, n. 1, p. 127, doi. 10.32614/RJ-2015-011

By:

Rödiger, Stefan;
Burdukiewicz, Michał;
Blagodatskikh, Konstantin;
Jahn, Michael;
Schierack, Peter

Publication type:

Article

Surface Melting Curve Analysis with R.

Published in:

R Journal, 2013, v. 5, n. 2, p. 37, doi. 10.32614/RJ-2013-024

By:

Rödiger, Stefan;
Böhm, Alexander;
Schimke, Ingolf

Publication type:

Article

Solid-phase microbead array for multiplex O-serotyping of Escherichia coli.

Published in:

Microchimica Acta, 2017, v. 184, n. 5, p. 1405, doi. 10.1007/s00604-017-2088-4

By:

Liebsch, Claudia;
Rödiger, Stefan;
Böhm, Alexander;
Nitschke, Jörg;
Weinreich, Jörg;
Fruth, Angelika;
Roggenbuck, Dirk;
Lehmann, Werner;
Schedler, Uwe;
Juretzek, Thomas;
Schierack, Peter

Publication type:

Article

Increased proteasome activator 28 gamma (PA28γ) levels are unspecific but correlate with disease activity in rheumatoid arthritis.

Published in:

BMC Musculoskeletal Disorders, 2014, v. 15, n. 1, p. 164, doi. 10.1186/1471-2474-15-414

By:

Gruner, Melanie;
Moncsek, Anja;
Rödiger, Stefan;
Kühnhardt, Dagmar;
Feist, Eugen;
Stohwasser, Ralf

Publication type:

Article

Increased proteasome activator 28 gamma (PA28[gamma]) levels are unspecific but correlate with disease activity in rheumatoid arthritis.

Published in:

2014

By:

Gruner, Melanie;
Moncsek, Anja;
Rödiger, Stefan;
Kühnhardt, Dagmar;
Feist, Eugen;
Stohwasser, Ralf

Publication type:

Journal Article

Adhesion of Salmonella to Pancreatic Secretory Granule Membrane Major Glycoprotein GP2 of Human and Porcine Origin Depends on FimH Sequence Variation.

Published in:

Frontiers in Microbiology, 2018, p. N.PAG, doi. 10.3389/fmicb.2018.01905

By:

Kolenda, Rafał;
Burdukiewicz, Michał;
Schiebel, Juliane;
Rödiger, Stefan;
Sauer, Lysann;
Szabo, Istvan;
Orłowska, Aleksandra;
Weinreich, Jörg;
Nitschke, Jörg;
Böhm, Alexander;
Gerber, Ulrike;
Roggenbuck, Dirk;
Schierack, Peter

Publication type:

Article

Porcine <i>E. coli</i>: Virulence-Associated Genes, Resistance Genes and Adhesion and Probiotic Activity Tested by a New Screening Method.

Published in:

PLoS ONE, 2013, v. 8, n. 4, p. 1, doi. 10.1371/journal.pone.0059242

By:

Schierack, Peter;
Rödiger, Stefan;
Kuhl, Christoph;
Hiemann, Rico;
Roggenbuck, Dirk;
Li, Ganwu;
Weinreich, Jörg;
Berger, Enrico;
Nolan, Lisa K.;
Nicholson, Bryon;
Römer, Antje;
Frömmel, Ulrike;
Wieler, Lothar H.;
Schröder, Christian

Publication type:

Article

A multiparametric fluorescence assay for screening aptamer–protein interactions based on microbeads.

Published in:

Scientific Reports, 2022, v. 12, n. 1, p. 1, doi. 10.1038/s41598-022-06817-0

By:

Schmidt, Carsten;
Kammel, Anne;
Tanner, Julian A.;
Kinghorn, Andrew B.;
Khan, Muhammad Moman;
Lehmann, Werner;
Menger, Marcus;
Schedler, Uwe;
Schierack, Peter;
Rödiger, Stefan

Publication type:

Article

A semi-automated, isolation-free, high-throughput SARS-CoV-2 reverse transcriptase (RT) loop-mediated isothermal amplification (LAMP) test.

Published in:

Scientific Reports, 2021, v. 11, n. 1, p. 1, doi. 10.1038/s41598-021-00827-0

By:

Schmidt, Jonas;
Berghaus, Sandro;
Blessing, Frithjof;
Wenzel, Folker;
Herbeck, Holger;
Blessing, Josef;
Schierack, Peter;
Rödiger, Stefan;
Roggenbuck, Dirk

Publication type:

Article

Deoxyribonuclease activity of polyclonal IgGs: a putative serological marker in patients with spondyloarthritides.

Published in:

Immunologic Research, 2013, v. 56, n. 2/3, p. 457, doi. 10.1007/s12026-013-8424-9

By:

Kundzer, Alena;
Volkova, Margarita;
Bogdanos, Dimitrios;
Rödiger, Stefan;
Schierack, Peter;
Generalov, I.;
Nevinsky, Georgy;
Roggenbuck, Dirk

Publication type:

Article

Simultaneous detection and quantification of DNA and protein biomarkers in spectrum of cardiovascular diseases in a microfluidic microbead chip.

Published in:

Analytical & Bioanalytical Chemistry, 2019, v. 411, n. 29, p. 7725, doi. 10.1007/s00216-019-02199-x

By:

Dinter, Franziska;
Burdukiewicz, Michał;
Schierack, Peter;
Lehmann, Werner;
Nestler, Jörg;
Dame, Gregory;
Rödiger, Stefan

Publication type:

Article

Investigation of Commensal Escherichia coli Populations of Cormorant Hatchlings in the Absence of Anthropogenic Impacts in Remote Areas of West Mongolia.

Published in:

Microorganisms, 2021, v. 9, n. 2, p. 372, doi. 10.3390/microorganisms9020372

By:

Khan, Muhammad Moman;
Kolenda, Rafal;
Schierack, Peter;
Weinreich, Jörg;
Rödiger, Stefan;
Schierack, Jakob;
Stubbe, Michael;
Lkhagvasuren, Davaa;
Guenther, Sebastian;
Schaufler, Katharina;
Hurtado, Ana

Publication type:

Article

System-specific periodicity in quantitative real-time polymerase chain reaction data questions threshold-based quantitation.

Published in:

Scientific Reports, 2016, p. 38951, doi. 10.1038/srep38951

By:

Spiess, Andrej-Nikolai;
Rödiger, Stefan;
Burdukiewicz, Michał;
Volksdorf, Thomas;
Tellinghuisen, Joel

Publication type:

Article

Adhesion patterns of commensal and pathogenic Escherichia coli from humans and wild animals on human and porcine epithelial cell lines.

Published in:

Gut Pathogens, 2013, v. 5, n. 1, p. 1, doi. 10.1186/1757-4749-5-31

By:

Frömmel, Ulrike;
Böhm, Alexander;
Nitschke, Jörg;
Weinreich, Jörg;
Groß, Julia;
Rödiger, Stefan;
Wex, Thomas;
Ansorge, Hermann;
Zinke, Olaf;
Schröder, Christian;
Roggenbuck, Dirk;
Schierack, Peter

Publication type:

Article