Works by Qi, Lishuang

Results: 35

A Qualitative Transcriptional Signature for Predicting CpG Island Methylator Phenotype Status of the Right-Sided Colon Cancer.

Published in:

Frontiers in Genetics, 2020, v. 11, p. N.PAG, doi. 10.3389/fgene.2020.00971

By:

You, Tianyi;
Song, Kai;
Guo, Wenbing;
Fu, Yelin;
Wang, Kai;
Zheng, Hailong;
Yang, Jing;
Jin, Liangliang;
Qi, Lishuang;
Guo, Zheng;
Zhao, Wenyuan

Publication type:

Article

An individualized gene expression signature for prediction of lung adenocarcinoma metastases.

Published in:

Molecular Oncology, 2017, v. 11, n. 11, p. 1630, doi. 10.1002/1878-0261.12137

By:

Qi, Lishuang;
Li, Tianhao;
Shi, Gengen;
Wang, Jiasheng;
Li, Xin;
Zhang, Sainan;
Chen, Libin;
Qin, Yuan;
Gu, Yunyan;
Zhao, Wenyuan;
Guo, Zheng

Publication type:

Article

Identification of driver copy number alterations in diverse cancer types and application in drug repositioning.

Published in:

Molecular Oncology, 2017, v. 11, n. 10, p. 1459, doi. 10.1002/1878-0261.12112

By:

Zhou, Wenbin;
Zhao, Zhangxiang;
Wang, Ruiping;
Han, Yue;
Wang, Chengyu;
Yang, Fan;
Han, Ya;
Liang, Haihai;
Qi, Lishuang;
Wang, Chenguang;
Guo, Zheng;
Gu, Yunyan

Publication type:

Article

An individualised signature for predicting response with concordant survival benefit for lung adenocarcinoma patients receiving platinum-based chemotherapy.

Published in:

2016

By:

Qi, Lishuang;
Li, Yang;
Qin, Yuan;
Shi, Gengen;
Li, Tianhao;
Wang, Jiasheng;
Chen, Libin;
Gu, Yunyan;
Zhao, Wenyuan;
Guo, Zheng

Publication type:

journal article

RNA-binding motif protein 10 represses tumor progression through the Wnt/β-catenin pathway in lung adenocarcinoma.

Published in:

International Journal of Biological Sciences, 2022, v. 18, n. 1, p. 124, doi. 10.7150/ijbs.63598

By:

Yingyue Cao;
Jianxiong Geng;
Xin Wang;
Qingwei Meng;
Shanqi Xu;
Yaoguo Lang;
Yongxu Zhou;
Lishuang Qi;
Zijie Wang;
Zixin Wei;
Yan Yu;
Shi Jin;
Bo Pan

Publication type:

Article

A qualitative transcriptional signature for the histological reclassification of lung squamous cell carcinomas and adenocarcinomas.

Published in:

BMC Genomics, 2019, v. 20, n. 1, p. N.PAG, doi. 10.1186/s12864-019-6086-2

By:

Li, Xin;
Shi, Gengen;
Chu, Qingsong;
Jiang, Wenbin;
Liu, Yixin;
Zhang, Sainan;
Zhang, Zheyang;
Wei, Zixin;
He, Fei;
Guo, Zheng;
Qi, Lishuang

Publication type:

Article

A qualitative transcriptional signature for predicting microsatellite instability status of right-sided Colon Cancer.

Published in:

BMC Genomics, 2019, v. 20, n. 1, p. N.PAG, doi. 10.1186/s12864-019-6129-8

By:

Fu, Yelin;
Qi, Lishuang;
Guo, Wenbing;
Jin, Liangliang;
Song, Kai;
You, Tianyi;
Zhang, Shuobo;
Gu, Yunyan;
Zhao, Wenyuan;
Guo, Zheng

Publication type:

Article

Identifying metabolic reprogramming phenotypes with glycolysis-lipid metabolism discoordination and intercellular communication for lung adenocarcinoma metastasis.

Published in:

Communications Biology, 2022, v. 5, n. 1, p. 1, doi. 10.1038/s42003-022-03135-z

By:

Li, Xin;
Tang, Lefan;
Deng, Jiaxing;
Qi, Xiuying;
Zhang, Juxuan;
Qi, Haitao;
Li, Mengyue;
Liu, Yixin;
Zhao, Wenyuan;
Gu, Yunyan;
Qi, Lishuang;
Li, Xia

Publication type:

Article

Reference genome and annotation updates lead to contradictory prognostic predictions in gene expression signatures: a case study of resected stage I lung adenocarcinoma.

Published in:

Briefings in Bioinformatics, 2021, v. 22, n. 3, p. 1, doi. 10.1093/bib/bbaa081

By:

Zhang, Zheyang;
Zhang, Sainan;
Li, Xin;
Zhao, Zhangxiang;
Chen, Changjing;
Zhang, Juxuan;
Li, Mengyue;
Wei, Zixin;
Jiang, Wenbin;
Pan, Bo;
Li, Ying;
Liu, Yixin;
Cao, Yingyue;
Zhao, Wenyuan;
Gu, Yunyan;
Yu, Yan;
Meng, Qingwei;
Qi, Lishuang

Publication type:

Article

An absolute human stemness index associated with oncogenic dedifferentiation.

Published in:

Briefings in Bioinformatics, 2021, v. 22, n. 2, p. 2151, doi. 10.1093/bib/bbz174

By:

Zheng, Hailong;
Song, Kai;
Fu, Yelin;
You, Tianyi;
Yang, Jing;
Guo, Wenbing;
Wang, Kai;
Jin, Liangliang;
Gu, Yunyan;
Qi, Lishuang;
Zhao, Wenyuan

Publication type:

Article

Link synthetic lethality to drug sensitivity of cancer cells.

Published in:

Briefings in Bioinformatics, 2019, p. 1295, doi. 10.1093/bib/bbx172

By:

Wang, Ruiping;
Han, Yue;
Zhao, Zhangxiang;
Yang, Fan;
Chen, Tingting;
Zhou, Wenbin;
Wang, Xianlong;
Qi, Lishuang;
Zhao, Wenyuan;
Guo, Zheng;
Gu, Yunyan

Publication type:

Article

A rank-based algorithm of differential expression analysis for small cell line data with statistical control.

Published in:

Briefings in Bioinformatics, 2019, v. 20, n. 2, p. 482, doi. 10.1093/bib/bbx135

By:

Li, Xiangyu;
Cai, Hao;
Wang, Xianlong;
Ao, Lu;
Guo, You;
He, Jun;
Gu, Yunyan;
Qi, Lishuang;
Guan, Qingzhou;
Lin, Xu;
Guo, Zheng

Publication type:

Article

A landscape of synthetic viable interactions in cancer.

Published in:

Briefings in Bioinformatics, 2018, v. 19, n. 4, p. 644, doi. 10.1093/bib/bbw142

By:

Gu, Yunyan;
Wang, Ruiping;
Han, Yue;
Zhou, Wenbin;
Zhao, Zhangxiang;
Chen, Tingting;
Zhang, Yuanyuan;
Peng, Fuduan;
Liang, Haihai;
Qi, Lishuang

Publication type:

Article

Critical limitations of prognostic signatures based on risk scores summarized from gene expression levels: a case study for resected stage I non-small-cell lung cancer.

Published in:

Briefings in Bioinformatics, 2016, v. 17, n. 2, p. 233, doi. 10.1093/bib/bbv064

By:

Lishuang Qi;
Libin Chen;
Yang Li;
Yuan Qin;
Rufei Pan;
Wenyuan Zhao;
Yunyan Gu;
Hongwei Wang;
Ruiping Wang;
Xiangqi Chen;
Zheng Guo

Publication type:

Article

Individualized identification of disease-associated pathways with disrupted coordination of gene expression.

Published in:

Briefings in Bioinformatics, 2016, v. 17, n. 1, p. 78, doi. 10.1093/bib/bbv030

By:

Hongwei Wang;
Hao Cai;
Lu Ao;
Haidan Yan;
Wenyuan Zhao;
Lishuang Qi;
Yunyan Gu;
Zheng Guo

Publication type:

Article

Identification of Genes Universally Differentially Expressed in Gastric Cancer.

Published in:

BioMed Research International, 2021, p. 1, doi. 10.1155/2021/7326853

By:

Shi, Yidan;
Qi, Lishuang;
Chen, Haifeng;
Zhang, Jiahui;
Guan, Qingzhou;
He, Jun;
Li, Meifeng;
Guo, Zheng;
Yan, Haidan;
Li, Ping

Publication type:

Article

A qualitative transcriptional signature of recurrence risk for stages II–III gastric cancer patients after surgical resection.

Published in:

Journal of Gastroenterology & Hepatology, 2021, v. 36, n. 9, p. 2501, doi. 10.1111/jgh.15439

By:

Zhang, Huarong;
Li, Xiangyu;
Wu, Junling;
Zhang, Jiahui;
Huang, Haiyan;
Li, Yawei;
Li, Meifeng;
Wang, Shanshan;
Xia, Jie;
Qi, Lishuang;
Chen, Ting;
Ao, Lu

Publication type:

Article

Integrating multi-omics to unveil PSMD12 as a critical gene in promoting brain metastases of lung adenocarcinoma.

Published in:

Journal of Translational Medicine, 2025, v. 23, n. 1, p. 1, doi. 10.1186/s12967-025-06680-3

By:

Li, Xin;
Zhang, Juxuan;
Zhang, Meng;
Jiang, Wenbin;
Jia, Dexin;
Wang, Ruxiong;
Li, Hao;
Wang, Zhihui;
Liu, Yixin;
Tang, Lefan;
Deng, Jiaxing;
Zhao, Wenyuan;
Yu, Yan;
Liu, Shilong;
Qi, Lishuang

Publication type:

Article

RBM15 recruits myeloid-derived suppressor cells via the m6A-IGF2BP3/CBR3-AS1/miR-409-3p/CXCL1 axis, facilitating radioresistance in non-small-cell lung cancer.

Published in:

Journal of Translational Medicine, 2025, v. 23, n. 1, p. 1, doi. 10.1186/s12967-025-06205-y

By:

Hu, Songliu;
Zhan, Ning;
Li, Jian;
Wang, Liqun;
Liu, Yiyan;
Jin, Ke;
Wang, Yixuan;
Zhang, Juxuan;
Chen, Yiyang;
Bai, Yang;
Wang, Yichong;
Qi, Lishuang;
Liu, Shilong

Publication type:

Article

Draw on advantages and avoid disadvantages: CT-derived individualized radiomic signature for predicting chemo-radiotherapy sensitivity in unresectable advanced non-small cell lung cancer.

Published in:

Journal of Cancer Research & Clinical Oncology, 2024, v. 150, n. 10, p. 1, doi. 10.1007/s00432-024-05971-4

By:

Yang, Liping;
Li, Mengyue;
Liu, Yixin;
Jiang, Zhiyun;
Xu, Shichuan;
Ding, Hongchao;
Gao, Xing;
Liu, Shilong;
Qi, Lishuang;
Wang, Kezheng

Publication type:

Article

Individual-level analysis of differential expression of genes and pathways for personalized medicine.

Published in:

Bioinformatics, 2015, v. 31, n. 1, p. 62, doi. 10.1093/bioinformatics/btu522

By:

Wang, Hongwei;
Sun, Qiang;
Zhao, Wenyuan;
Qi, Lishuang;
Gu, Yunyan;
Li, Pengfei;
Zhang, Mengmeng;
Li, Yang;
Liu, Shu-Lin;
Guo, Zheng

Publication type:

Article

A Qualitative Transcriptional Signature for Predicting Recurrence Risk for High-Grade Serous Ovarian Cancer Patients Treated With Platinum-Taxane Adjuvant Chemotherapy.

Published in:

Frontiers in Oncology, 2019, p. 1, doi. 10.3389/fonc.2019.01094

By:

Liu, Yixin;
Zhang, Zheyang;
Li, Tianhao;
Li, Xin;
Zhang, Sainan;
Li, Ying;
Zhao, Wenyuan;
Gu, Yunyan;
Guo, Zheng;
Qi, Lishuang

Publication type:

Article

Hierarchical identification of a transcriptional panel for the histological diagnosis of lung neuroendocrine tumors.

Published in:

Frontiers in Genetics, 2022, v. 13, p. 1, doi. 10.3389/fgene.2022.944167

By:

Juxuan Zhang;
Jiaxing Deng;
Xiao Feng;
Yilong Tan;
Xin Li;
Yixin Liu;
Mengyue Li;
Haitao Qi;
Lefan Tang;
Qingwei Meng;
Haidan Yan;
Lishuang Qi

Publication type:

Article

A genetic map of the chromatin regulators to drug response in cancer cells.

Published in:

2022

By:

Chen, Bo;
Li, Pengfei;
Liu, Mingyue;
Liu, Kaidong;
Zou, Min;
Geng, Yiding;
Zhuang, Shuping;
Xu, Huanhuan;
Wang, Linzhu;
Chen, Tingting;
Li, Yawei;
Zhao, Zhangxiang;
Qi, Lishuang;
Gu, Yunyan

Publication type:

journal article

Identifying primary site of lung-limited Cancer of unknown primary based on relative gene expression orderings.

Published in:

2019

By:

Li, Mengyao;
Li, Hongdong;
Hong, Guini;
Tang, Zhongjie;
Liu, Guanghao;
Lin, Xiaofang;
Lin, Mingzhang;
Qi, Lishuang;
Guo, Zheng

Publication type:

journal article

Predicting Chemo-Radiotherapy Sensitivity With Concordant Survival Benefit in Non-Small Cell Lung Cancer via Computed Tomography Derived Radiomic Features.

Published in:

Frontiers in Oncology, 2022, v. 12, p. 1, doi. 10.3389/fonc.2022.832343

By:

Liu, Yixin;
Qi, Haitao;
Wang, Chunni;
Deng, Jiaxing;
Tan, Yilong;
Lin, Lin;
Cui, Zhirou;
Li, Jin;
Qi, Lishuang

Publication type:

Article

Sec61γ is a vital protein in the endoplasmic reticulum membrane promoting tumor metastasis and invasion in lung adenocarcinoma.

Published in:

British Journal of Cancer, 2023, v. 128, n. 8, p. 1478, doi. 10.1038/s41416-023-02150-z

By:

Xu, Shanqi;
Li, Xin;
Geng, Jianxiong;
Cao, Yingyue;
Yu, Yan;
Qi, Lishuang

Publication type:

Article

Differential expression analysis at the individual level reveals a lncRNA prognostic signature for lung adenocarcinoma.

Published in:

Molecular Cancer, 2017, v. 16, p. 1, doi. 10.1186/s12943-017-0666-z

By:

Fuduan Peng;
Ruiping Wang;
Yuanyuan Zhang;
Zhangxiang Zhao;
Wenbin Zhou;
Zhiqiang Chang;
Haihai Liang;
Wenyuan Zhao;
Lishuang Qi;
Zheng Guo;
Yunyan Gu

Publication type:

Article

Autophagy-related prognostic signature for breast cancer.

Published in:

Molecular Carcinogenesis, 2016, v. 55, n. 3, p. 292, doi. 10.1002/mc.22278

By:

Gu, Yunyan;
Li, Pengfei;
Peng, Fuduan;
Zhang, Mengmeng;
Zhang, Yuanyuan;
Liang, Haihai;
Zhao, Wenyuan;
Qi, Lishuang;
Wang, Hongwei;
Wang, Chenguang;
Guo, Zheng

Publication type:

Article

Identification of mutational signature for lung adenocarcinoma prognosis and immunotherapy prediction.

Published in:

Journal of Molecular Medicine, 2022, v. 100, n. 12, p. 1755, doi. 10.1007/s00109-022-02266-4

By:

Zhang, Sainan;
Li, Mengyue;
Tan, Yilong;
Zhang, Juxuan;
Liu, Yixin;
Jiang, Wenbin;
Li, Xin;
Qi, Haitao;
Tang, Lefan;
Ji, Ran;
Zhao, Wenyuan;
Gu, Yunyan;
Qi, Lishuang

Publication type:

Article

Deconvolution of the Gene Expression Profiles of Valuable Banked Blood Specimens for Studying the Prognostic Values of Altered Peripheral Immune Cell Proportions in Cancer Patients.

Published in:

PLoS ONE, 2014, v. 9, n. 6, p. 1, doi. 10.1371/journal.pone.0100934

By:

Qi, Lishuang;
Li, Bailiang;
Dong, Yu;
Xu, Hui;
Chen, Libin;
Wang, Hongwei;
Li, Pengfei;
Zhao, Wenyuan;
Gu, Yunyan;
Wang, Chenguang;
Guo, Zheng

Publication type:

Article

Functional Comparison between Genes Dysregulated in Ulcerative Colitis and Colorectal Carcinoma.

Published in:

PLoS ONE, 2013, v. 8, n. 8, p. 1, doi. 10.1371/journal.pone.0071989

By:

Zhao, Wenyuan;
Qi, Lishuang;
Qin, Yao;
Wang, Hongwei;
Chen, Beibei;
Wang, Ruiping;
Gu, Yunyan;
Liu, Chunyang;
Wang, Chenguang;
Guo, Zheng

Publication type:

Article

Pitfalls in Experimental Designs for Characterizing the Transcriptional, Methylational and Copy Number Changes of Oncogenes and Tumor Suppressor Genes.

Published in:

PLoS ONE, 2013, v. 8, n. 3, p. 1, doi. 10.1371/journal.pone.0058163

By:

Zhang, Yuannv;
Xia, Jiguang;
Zhang, Yujing;
Qin, Yao;
Yang, Da;
Qi, Lishuang;
Zhao, Wenyuan;
Wang, Chenguang;
Guo, Zheng

Publication type:

Article

Overexpression of HYOU1 is associated with cisplatin resistance and may depend on m<sup>6</sup>A modification in patients with cervical cancer.

Published in:

Oncology Letters, 2025, v. 29, n. 2, p. N.PAG, doi. 10.3892/ol.2024.14823

By:

Wang, Ruixue;
Deng, Jiaxing;
Zhang, Meng;
Wang, Zhihui;
Wu, Shangjie;
Liu, Shilong;
Qi, Lishuang

Publication type:

Article

Identification of a small mutation panel of coding sequences to predict the efficacy of immunotherapy for lung adenocarcinoma.

Published in:

2020

By:

Li, Ying;
Jiang, Wenbin;
Li, Tianhao;
Li, Mengyue;
Li, Xin;
Zhang, Zheyang;
Zhang, Sainan;
Liu, Yixin;
Zhao, Wenyuan;
Gu, Yunyan;
Qi, Lishuang;
Ao, Lu;
Guo, Zheng

Publication type:

journal article