Works by Prestegard, James H

Results: 27

Sparse isotope labeling for nuclear magnetic resonance (NMR) of glycoproteins using 13C-glucose.

Published in:

Glycobiology, 2021, v. 31, n. 4, p. 425, doi. 10.1093/glycob/cwaa071

By:

Rogals, Monique J;
Yang, Jeong-Yeh;
Williams, Robert V;
Moremen, Kelley W;
Amster, I Jonathan;
Prestegard, James H

Publication type:

Article

Impact of sulfation pattern on the conformation and dynamics of sulfated fucan oligosaccharides as revealed by NMR and MD.

Published in:

Glycobiology, 2015, v. 25, n. 5, p. 535, doi. 10.1093/glycob/cwu184

By:

Queiroz, Ismael N. L.;
Xiaocong Wang;
Glushka, John N.;
Santos, Gustavo R. C.;
Valente, Ana P.;
Prestegard, James H.;
Woods, Robert J.;
Mourão, Paulo A. S.;
Pomin, Vitor H.

Publication type:

Article

Exploiting enzyme specificities in digestions of chondroitin sulfates A and C: Production of well-defined hexasaccharides.

Published in:

Glycobiology, 2012, v. 22, n. 6, p. 826, doi. 10.1093/glycob/cws055

By:

Pomin, Vitor H;
Park, Younghee;
Huang, Rongrong;
Heiss, Christian;
Sharp, Joshua S;
Azadi, Parastoo;
Prestegard, James H

Publication type:

Article

Extension and validation of the GLYCAM force field parameters for modeling glycosaminoglycans.

Published in:

Canadian Journal of Chemistry, 2016, v. 94, n. 11, p. 927, doi. 10.1139/cjc-2015-0606

By:

Singh, Arunima;
Tessier, Matthew B.;
Pederson, Kari;
Wang, Xiaocong;
Venot, Andre P.;
Boons, Geert-Jan;
Prestegard, James H.;
Woods, Robert J.

Publication type:

Article

Measurement of residual dipolar couplings in methyl groups via carbon detection.

Published in:

Journal of Biomolecular NMR, 2019, v. 73, n. 3/4, p. 191, doi. 10.1007/s10858-019-00245-5

By:

Williams, Robert V.;
Yang, Jeong-Yeh;
Moremen, Kelley W.;
Amster, I. Jonathan;
Prestegard, James H.

Publication type:

Article

Partial 13C isotopic enrichment of nucleoside monophosphates: useful reporters for NMR structural studies.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 18, p. e164, doi. 10.1093/nar/gni165

By:

Kishore, Anita I.;
Mayer, Michael R.;
Prestegard, James H.

Publication type:

Article

Structural homology of spinach acyl carrier protein and Escherichia coli acyl carrier protein based on NMR data.

Published in:

Proteins, 1997, v. 27, n. 1, p. 131, doi. 10.1002/(SICI)1097-0134(199701)27:1<131::AID-PROT13>3.0.CO;2-O

By:

Oswood, Mark C.;
Kim, Yangmee;
Ohlrogge, John B.;
Prestegard, James H.

Publication type:

Article

Refinement of the NMR structures for acyl carrier protein with scalar coupling data.

Published in:

Proteins, 1990, v. 8, n. 4, p. 377, doi. 10.1002/prot.340080411

By:

Kim, Yangmee;
Prestegard, James H.

Publication type:

Article

NMR analysis suggests the terminal domains of Robo1 remain extended but are rigidified in the presence of heparan sulfate.

Published in:

Scientific Reports, 2022, v. 12, n. 1, p. 1, doi. 10.1038/s41598-022-18769-6

By:

Williams, Robert V.;
Huang, Chin;
Moremen, Kelley W.;
Amster, I. Jonathan;
Prestegard, James H.

Publication type:

Article

Validated determination of NRG1 Ig-like domain structure by mass spectrometry coupled with computational modeling.

Published in:

Communications Biology, 2022, v. 5, n. 1, p. 1, doi. 10.1038/s42003-022-03411-y

By:

Khaje, Niloofar Abolhasani;
Eletsky, Alexander;
Biehn, Sarah E.;
Mobley, Charles K.;
Rogals, Monique J.;
Kim, Yoonkyoo;
Mishra, Sushil K.;
Doerksen, Robert J.;
Lindert, Steffen;
Prestegard, James H.;
Sharp, Joshua S.

Publication type:

Article

Mistakes in translation: Reflections on mechanism.

Published in:

PLoS ONE, 2017, v. 12, n. 6, p. 1, doi. 10.1371/journal.pone.0180566

By:

Liu, Yizhou;
Sharp, Joshua S.;
Do, Duc H-T.;
Kahn, Richard A.;
Schwalbe, Harald;
Buhr, Florian;
Prestegard, James H.

Publication type:

Article

Lanthanide binding and IgG affinity construct: Potential applications in solution NMR, MRI, and luminescence microscopy.

Published in:

Protein Science: A Publication of the Protein Society, 2012, v. 21, n. 10, p. 1456, doi. 10.1002/pro.2133

By:

Barb, Adam W.;
Ho, Tienhuei Grace;
Flanagan-Steet, Heather;
Prestegard, James H.

Publication type:

Article

Structures of domains I and IV from YbbR are representative of a widely distributed protein family.

Published in:

Protein Science: A Publication of the Protein Society, 2011, v. 20, n. 2, p. 396, doi. 10.1002/pro.571

By:

Barb, Adam W.;
Cort, John R.;
Seetharaman, Jayaraman;
Lew, Scott;
Lee, Hsiau-Wei;
Acton, Thomas;
Xiao, Rong;
Kennedy, Michael A.;
Tong, Liang;
Montelione, Gaetano T.;
Prestegard, James H.

Publication type:

Article

Three-dimensional structure of the weakly associated protein homodimer SeR13 using RDCs and paramagnetic surface mapping.

Published in:

Protein Science: A Publication of the Protein Society, 2010, v. 19, n. 9, p. 1673, doi. 10.1002/pro.447

By:

Lee, Hsiau-Wei;
Wylie, Greg;
Bansal, Sonal;
Wang, Xu;
Barb, Adam W.;
Macnaughtan, Megan A.;
Ertekin, Asli;
Montelione, Gaetano T.;
Prestegard, James H.

Publication type:

Article

Structure determination of a Galectin-3-carbohydrate complex using paramagnetism-based NMR constraints.

Published in:

Protein Science: A Publication of the Protein Society, 2008, v. 17, n. 7, p. 1220, doi. 10.1110/ps.034561.108

By:

Zhuang, Tiandi;
Lee, Han-Seung;
Imperiali, Barbara;
Prestegard, James H.

Publication type:

Article

RDC-assisted modeling of symmetric protein homo-oligomers.

Published in:

Protein Science: A Publication of the Protein Society, 2008, v. 17, n. 5, p. 899, doi. 10.1110/ps.073395108

By:

Wang, Xu;
Bansal, Sonal;
Jiang, Mei;
Prestegard, James H.

Publication type:

Article

Enhancement of bound-state residual dipolar couplings: Conformational analysis of lactose bound to Galectin-3.

Published in:

Protein Science: A Publication of the Protein Society, 2006, v. 15, n. 7, p. 1780, doi. 10.1110/ps.051994306

By:

Zhuang, Tiandi;
Leffler, Hakon;
Prestegard, James H.

Publication type:

Article

Distance mapping of protein-binding sites using spin-labeled oligosaccharide ligands.

Published in:

Protein Science: A Publication of the Protein Society, 2001, v. 10, n. 11, p. 2393, doi. 10.1110/ps.17401

By:

Jain, Nitin U.;
Venot, Andre;
Umemoto, Kimiko;
Leffler, Hakon;
Prestegard, James H.

Publication type:

Article

The influence of C-terminal extension on the structure of the 'J-domain' in E. coli DnaJ.

Published in:

Protein Science: A Publication of the Protein Society, 1999, v. 8, n. 1, p. 203, doi. 10.1110/ps.8.1.203

By:

Huang, Kai;
Flanagan, John M.;
Prestegard, James H.

Publication type:

Article

A Straightforward NMR-Spectroscopy-Based Method for Rapid Library Screening.

Published in:

Angewandte Chemie International Edition, 2002, v. 41, n. 18, p. 3454, doi. 10.1002/1521-3773(20020916)41:18<3454::AID-ANIE3454>3.0.CO;2-L

By:

Siriwardena, Aloysius H.;
Tian, Fang;
Noble, Schroder;
Prestegard, James H.

Publication type:

Article

Datamining Protein Structure Databanks for Crystallization Patterns of Proteins.

Published in:

Annals of the New York Academy of Sciences, 2002, v. 980, n. 1, p. 13, doi. 10.1111/j.1749-6632.2002.tb04885.x

By:

VALAFAR, HOMAYOUN;
PRESTEGARD, JAMES H.;
VALAFAR, FARAMARZ

Publication type:

Article

Dynamic structure of membrane-anchored Arf•GTP.

Published in:

Nature Structural & Molecular Biology, 2010, v. 17, n. 7, p. 876, doi. 10.1038/nsmb.1853

By:

Yizhou Liu;
Kahn, Richard A.;
Prestegard, James H.

Publication type:

Article

Protein Structure Validation and Identification from Unassigned Residual Dipolar Coupling Data Using 2D-PDPA.

Published in:

Molecules, 2013, v. 18, n. 9, p. 10162, doi. 10.3390/molecules180910162

By:

Arjang Fahim;
Rishi Mukhopadhyay;
Ryan Yandle;
Prestegard, James H.;
Valafar, Homayoun

Publication type:

Article

NMR analysis demonstrates immunoglobulin G N-glycans are accessible and dynamic.

Published in:

Nature Chemical Biology, 2011, v. 7, n. 3, p. 147, doi. 10.1038/nchembio.511

By:

Barb, Adam W.;
Prestegard, James H.

Publication type:

Article

Assignment of protein backbone resonances using connectivity, torsion angles and 13Cα chemical shifts.

Published in:

Journal of Biomolecular NMR, 2004, v. 29, n. 1, p. 1, doi. 10.1023/B:JNMR.0000019500.76436.31

By:

Morris, Laura C.;
Valafar, Homayoun;
Prestegard, James H.

Publication type:

Article

Cyclic enterobacterial common antigen: Potential contaminant of bacterially expressed protein preparations.

Published in:

Journal of Biomolecular NMR, 2004, v. 29, n. 2, p. 199, doi. 10.1023/B:JNMR.0000019252.65073.24

By:

Erbel, Paul J. A.;
Seidel, Ronald;
Macintosh, Scott E.;
Gentile, Lisa N.;
Amor, Juan C.;
Kahn, Richard A.;
Prestegard, James H.;
McIntosh, Lawrence P.;
Gardner, Kevin H.

Publication type:

Article

Letter to the Editor: 1H, 15N and 13C assignments of full length human ADP Ribosylation Factor 1 (ARF1) using triple resonance connectivities and dipolar couplings.

Published in:

Journal of Biomolecular NMR, 2002, v. 23, n. 3, p. 253, doi. 10.1023/A:1019839607202

By:

Amor, Juan Carlos;
Seidel III, Ronald D.;
Tian, Fang;
Kahn, Richard A.;
Prestegard, James H.

Publication type:

Article

Works by Prestegard, James H

Sparse isotope labeling for nuclear magnetic resonance (NMR) of glycoproteins using <sup>13</sup>C-glucose.

Impact of sulfation pattern on the conformation and dynamics of sulfated fucan oligosaccharides as revealed by NMR and MD.

Exploiting enzyme specificities in digestions of chondroitin sulfates A and C: Production of well-defined hexasaccharides.

Extension and validation of the GLYCAM force field parameters for modeling glycosaminoglycans.

Measurement of residual dipolar couplings in methyl groups via carbon detection.

Partial 13C isotopic enrichment of nucleoside monophosphates: useful reporters for NMR structural studies.

Structural homology of spinach acyl carrier protein and Escherichia coli acyl carrier protein based on NMR data.

Refinement of the NMR structures for acyl carrier protein with scalar coupling data.

NMR analysis suggests the terminal domains of Robo1 remain extended but are rigidified in the presence of heparan sulfate.

Validated determination of NRG1 Ig-like domain structure by mass spectrometry coupled with computational modeling.

Mistakes in translation: Reflections on mechanism.

Lanthanide binding and IgG affinity construct: Potential applications in solution NMR, MRI, and luminescence microscopy.

Structures of domains I and IV from YbbR are representative of a widely distributed protein family.

Three-dimensional structure of the weakly associated protein homodimer SeR13 using RDCs and paramagnetic surface mapping.

Structure determination of a Galectin-3-carbohydrate complex using paramagnetism-based NMR constraints.

RDC-assisted modeling of symmetric protein homo-oligomers.

Enhancement of bound-state residual dipolar couplings: Conformational analysis of lactose bound to Galectin-3.

Distance mapping of protein-binding sites using spin-labeled oligosaccharide ligands.

The influence of C-terminal extension on the structure of the 'J-domain' in E. coli DnaJ.

A Straightforward NMR-Spectroscopy-Based Method for Rapid Library Screening.

Datamining Protein Structure Databanks for Crystallization Patterns of Proteins.

Dynamic structure of membrane-anchored Arf•GTP.

Protein Structure Validation and Identification from Unassigned Residual Dipolar Coupling Data Using 2D-PDPA.

NMR analysis demonstrates immunoglobulin G N-glycans are accessible and dynamic.

Assignment of protein backbone resonances using connectivity, torsion angles and <sup>13</sup>C<sup>α</sup> chemical shifts.

Cyclic enterobacterial common antigen: Potential contaminant of bacterially expressed protein preparations.

Letter to the Editor: <sup>1</sup>H, <sup>15</sup>N and <sup>13</sup>C assignments of full length human ADP Ribosylation Factor 1 (ARF1) using triple resonance connectivities and dipolar couplings.