Works by Prangishvili, David

Results: 50

Archaeal viruses: living fossils of the ancient virosphere?

Published in:

Annals of the New York Academy of Sciences, 2015, v. 1341, n. 1, p. 35, doi. 10.1111/nyas.12710

By:

Prangishvili, David

Publication type:

Article

Egress of archaeal viruses.

Published in:

Cellular Microbiology, 2021, v. 23, n. 12, p. 1, doi. 10.1111/cmi.13394

By:

Baquero, Diana P.;
Liu, Junfeng;
Prangishvili, David

Publication type:

Article

A novel archaeal regulatory protein, Sta1, activates transcription from viral promoters.

Published in:

Nucleic Acids Research, 2006, v. 34, n. 17, p. 4837, doi. 10.1093/nar/gkl502

By:

Kessler, Alexandra;
Sezonov, Guennadi;
Guijarro, J. Iñaki;
Desnoues, Nicole;
Rose, Thierry;
Delepierre, Muriel;
Bell, Stephen D.;
Prangishvili, David

Publication type:

Article

Structural basis of enzyme encapsulation into a bacterial nanocompartment.

Published in:

Nature Structural & Molecular Biology, 2008, v. 15, n. 9, p. 939, doi. 10.1038/nsmb.1473

By:

Sutter, Markus;
Boehringer, Daniel;
Gutmann, Sascha;
Günther, Susanne;
Prangishvili, David;
Loessner, Martin J.;
Stetter, Karl O.;
Weber-Ban, Eilika;
Ban, Nenad

Publication type:

Article

The legacy of Carl Woese and Wolfram Zillig: from phylogeny to landmark discoveries.

Published in:

Nature Reviews Microbiology, 2013, v. 11, n. 10, p. 713, doi. 10.1038/nrmicro3124

By:

Albers, Sonja-Verena;
Forterre, Patrick;
Prangishvili, David;
Schleper, Christa

Publication type:

Article

Identification of the minimal replicon and the origin of replication of the crenarchaeal plasmid pRN1.

Published in:

MicrobiologyOpen, 2014, v. 3, n. 5, p. 688, doi. 10.1002/mbo3.198

By:

Berkner, Silvia;
Hinojosa, Mery Pina;
Prangishvili, David;
Lipps, Georg

Publication type:

Article

Structural conservation in a membrane-enveloped filamentous virus infecting a hyperthermophilic acidophile.

Published in:

Nature Communications, 2018, v. 9, p. 1, doi. 10.1038/s41467-018-05684-6

By:

Ying Liu;
Osinsk, Tomasz;
Wang, Fengbin;
Krupovic, Mart;
Schouten, Stefan;
Kasson, Peter;
Prangishvili, David;
Egelma, Edward H.

Publication type:

Article

Unique architecture of thermophilic archaeal virus APBV1 and its genome packaging.

Published in:

Nature Communications, 2017, v. 8, n. 1, p. 1, doi. 10.1038/s41467-017-01668-0

By:

Ptchelkine, Denis;
Gillum, Ashley;
Mochizuki, Tomohiro;
Lucas-Staat, Soizick;
Ying Liu;
Krupovic, Mart;
Phillips, Simon E. V.;
Prangishvili, David;
Huiskonen, Juha T.

Publication type:

Article

&Eavute;nigmatiques virus d'archées.

Published in:

Biologie Aujourd'hui, 2013, v. 207, n. 3, p. 169, doi. 10.1051/jbio/2013015

By:

Bize, Ariane;
Sezonov, Guennadi;
Prangishvili, David

Publication type:

Article

Casposons: a new superfamily of self-synthesizing DNA transposons at the origin of prokaryotic CRISPR-Cas immunity.

Published in:

BMC Biology, 2014, v. 12, n. 1, p. 1, doi. 10.1186/1741-7007-12-36

By:

Krupovic, Mart;
Makarova, Kira S.;
Forterre, Patrick;
Prangishvili, David;
Koonin, Eugene V.

Publication type:

Article

Dark matter in archaeal genomes: a rich source of novel mobile elements, defense systems and secretory complexes.

Published in:

Extremophiles, 2014, v. 18, n. 5, p. 877, doi. 10.1007/s00792-014-0672-7

By:

Makarova, Kira;
Wolf, Yuri;
Forterre, Patrick;
Prangishvili, David;
Krupovic, Mart;
Koonin, Eugene

Publication type:

Article

Characterization of Sulfolobus islandicus rod-shaped virus 2 gp19, a single-strand specific endonuclease.

Published in:

Extremophiles, 2011, v. 15, n. 5, p. 619, doi. 10.1007/s00792-011-0385-0

By:

Gardner, Andrew F.;
Prangishvili, David;
Jack, William E.

Publication type:

Article

Genomic analysis of Acidianus hospitalis W1 a host for studying crenarchaeal virus and plasmid life cycles.

Published in:

Extremophiles, 2011, v. 15, n. 4, p. 487, doi. 10.1007/s00792-011-0379-y

By:

Xiao-Yan You;
Chao Liu;
Sheng-Yue Wang;
Cheng-Ying Jiang;
Shiraz Shah;
Prangishvili, David;
Qunxin She;
Shuang-Jiang Liu;
Garrett, Roger A.

Publication type:

Article

Taxonomy of prokaryotic viruses: 2016 update from the ICTV bacterial and archaeal viruses subcommittee.

Published in:

Archives of Virology, 2017, v. 162, n. 4, p. 1153, doi. 10.1007/s00705-016-3173-4

By:

Adriaenssens, Evelien;
Krupovic, Mart;
Knezevic, Petar;
Ackermann, Hans-Wolfgang;
Barylski, Jakub;
Brister, J.;
Clokie, Martha;
Duffy, Siobain;
Dutilh, Bas;
Edwards, Robert;
Enault, Francois;
Jang, Ho;
Klumpp, Jochen;
Kropinski, Andrew;
Lavigne, Rob;
Poranen, Minna;
Prangishvili, David;
Rumnieks, Janis;
Sullivan, Matthew;
Wittmann, Johannes

Publication type:

Article

Taxonomy of prokaryotic viruses: update from the ICTV bacterial and archaeal viruses subcommittee.

Published in:

Archives of Virology, 2016, v. 161, n. 4, p. 1095, doi. 10.1007/s00705-015-2728-0

By:

Krupovic, Mart;
Dutilh, Bas;
Adriaenssens, Evelien;
Wittmann, Johannes;
Vogensen, Finn;
Sullivan, Mathew;
Rumnieks, Janis;
Prangishvili, David;
Lavigne, Rob;
Kropinski, Andrew;
Klumpp, Jochen;
Gillis, Annika;
Enault, Francois;
Edwards, Rob;
Duffy, Siobain;
Clokie, Martha;
Barylski, Jakub;
Ackermann, Hans-Wolfgang;
Kuhn, Jens

Publication type:

Article

Multiple variants of the archaeal DNA rudivirus SIRV1 in a single host and a novel mechanism of genomic variation.

Published in:

Molecular Microbiology, 2004, v. 54, n. 2, p. 366, doi. 10.1111/j.1365-2958.2004.04287.x

By:

Xu Peng;
Kessler, Alexandra;
Hien Phan;
Garrett, Roger A.;
Prangishvili, David

Publication type:

Article

The genetic element pSSVx of the extremely thermophilic crenarchaeon Sulfolobus is a hybrid between a plasmid and a virus.

Published in:

Molecular Microbiology, 1999, v. 34, n. 2, p. 217, doi. 10.1046/j.1365-2958.1999.01573.x

By:

Arnold, Hans Peter;
She, Qunxin;
Phan, Hien;
Stedman, Kenneth;
Prangishvili, David;
Holz, Ingelore;
Kristjansson, Jakob K;
Garrett, Roger;
Zillig, Wolfram

Publication type:

Article

Unexpected and novel putative viruses in the sediments of a deep-dark permanently anoxic freshwater habitat.

Published in:

ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2012, v. 6, n. 11, p. 2119, doi. 10.1038/ismej.2012.49

By:

Borrel, Guillaume;
Colombet, Jonathan;
Robin, Agnès;
Lehours, Anne-Catherine;
Prangishvili, David;
Sime-Ngando, Télesphore

Publication type:

Article

Site-specific and Spatially Controlled Addressability of a New Viral Nanobuilding Block: Sulfolobus islandicus Rod-shaped Virus 2.

Published in:

Advanced Functional Materials, 2008, v. 18, n. 21, p. 3478, doi. 10.1002/adfm.200800711

By:

Steinmetz, Nicole F.;
Bize, Ariane;
Findlay, Kim C.;
Lomonossoff, George P.;
Manchester, Marianne;
Evans, David J.;
Prangishvili, David

Publication type:

Article

A Novel Virus Family, the Rudiviridae: Structure, Virus-Host Interactions and Genome Variability....

Published in:

Genetics, 1999, v. 152, n. 4, p. 1387, doi. 10.1093/genetics/152.4.1387

By:

Prangishvili, David;
Arnold, Hans Peter

Publication type:

Article

Unique genome replication mechanism of the archaeal virus AFV1.

Published in:

Molecular Microbiology, 2014, v. 92, n. 6, p. 1313, doi. 10.1111/mmi.12630

By:

Pina, Mery;
Basta, Tamara;
Quax, Tessa E. F.;
Joubert, Alexandra;
Baconnais, Sonia;
Cortez, Diego;
Lambert, Sarah;
Le Cam, Eric;
Bell, Stephen D.;
Forterre, Patrick;
Prangishvili, David

Publication type:

Article

Novel archaeal plasmid pAH1 and its interactions with the lipothrixvirus AFV1.

Published in:

Molecular Microbiology, 2009, v. 71, n. 1, p. 23, doi. 10.1111/j.1365-2958.2008.06488.x

By:

Basta, Tamara;
Smyth, John;
Forterre, Patrick;
Prangishvili, David;
Xu Peng

Publication type:

Article

Virus-borne mini-CRISPR arrays are involved in interviral conflicts.

Published in:

Nature Communications, 2019, v. 10, n. 1, p. 1, doi. 10.1038/s41467-019-13205-2

By:

Medvedeva, Sofia;
Liu, Ying;
Koonin, Eugene V.;
Severinov, Konstantin;
Prangishvili, David;
Krupovic, Mart

Publication type:

Article

Genomics and biology of Rudiviruses, a model for the study of virus-host interactions in Archaea.

Published in:

Biochemical Society Transactions, 2013, v. 41, n. 1, p. 443, doi. 10.1042/BST20120313

By:

Prangishvili, David;
Koonin, Eugene V.;
Krupovic, Mart

Publication type:

Article

Microbial Diversity and Phage–Host Interactions in the Georgian Coastal Area of the Black Sea Revealed by Whole Genome Metagenomic Sequencing.

Published in:

Marine Drugs, 2020, v. 18, n. 11, p. 558, doi. 10.3390/md18110558

By:

Jaiani, Ekaterine;
Kusradze, Ia;
Kokashvili, Tamar;
Geliashvili, Natia;
Janelidze, Nino;
Kotorashvili, Adam;
Kotaria, Nato;
Guchmanidze, Archil;
Tediashvili, Marina;
Prangishvili, David

Publication type:

Article

Structure of a filamentous virus uncovers familial ties within the archaeal virosphere.

Published in:

Virus Evolution, 2020, v. 6, n. 1, p. 1, doi. 10.1093/ve/veaa023

By:

Wang, Fengbin;
Baquero, Diana P;
Su, Zhangli;
Osinski, Tomasz;
Prangishvili, David;
Egelman, Edward H;
Krupovic, Mart

Publication type:

Article

New insights into the diversity and evolution of the archaeal mobilome from three complete genomes of Saccharolobus shibatae.

Published in:

Environmental Microbiology, 2021, v. 23, n. 8, p. 4612, doi. 10.1111/1462-2920.15654

By:

Medvedeva, Sofia;
Brandt, David;
Cvirkaite‐Krupovic, Virginija;
Liu, Ying;
Severinov, Konstantin;
Ishino, Sonoko;
Ishino, Yoshizumi;
Prangishvili, David;
Kalinowski, Jörn;
Krupovic, Mart

Publication type:

Article

Novel haloarchaeal viruses from Lake Retba infecting Haloferax and Halorubrum species.

Published in:

Environmental Microbiology, 2019, v. 21, n. 6, p. 2129, doi. 10.1111/1462-2920.14604

By:

Mizuno, Carolina M.;
Prajapati, Bina;
Lucas‐Staat, Soizick;
Sime‐Ngando, Telesphore;
Forterre, Patrick;
Bamford, Dennis H.;
Prangishvili, David;
Krupovic, Mart;
Oksanen, Hanna M.

Publication type:

Article

Integrated mobile genetic elements in Thaumarchaeota.

Published in:

Environmental Microbiology, 2019, v. 21, n. 6, p. 2056, doi. 10.1111/1462-2920.14564

By:

Krupovic, Mart;
Makarova, Kira S.;
Wolf, Yuri I.;
Medvedeva, Sofia;
Prangishvili, David;
Forterre, Patrick;
Koonin, Eugene V.

Publication type:

Article

New archaeal viruses discovered by metagenomic analysis of viral communities in enrichment cultures.

Published in:

Environmental Microbiology, 2019, v. 21, n. 6, p. 2002, doi. 10.1111/1462-2920.14479

By:

Liu, Ying;
Brandt, David;
Ishino, Sonoko;
Ishino, Yoshizumi;
Koonin, Eugene V.;
Kalinowski, Jörn;
Krupovic, Mart;
Prangishvili, David

Publication type:

Article

Analysis of metagenomic data reveals common features of halophilic viral communities across continents.

Published in:

Environmental Microbiology, 2016, v. 18, n. 3, p. 889, doi. 10.1111/1462-2920.13084

By:

Roux, Simon;
Enault, Francois;
Ravet, Viviane;
Colombet, Jonathan;
Bettarel, Yvan;
Auguet, Jean ‐ Christophe;
Bouvier, Thierry;
Lucas ‐ Staat, Soizick;
Vellet, Agnès;
Prangishvili, David;
Forterre, Patrick;
Debroas, Didier;
Sime ‐ Ngando, Telesphore

Publication type:

Article

Diversity of virus-host systems in hypersaline Lake Retba, Senegal.

Published in:

Environmental Microbiology, 2011, v. 13, n. 8, p. 1956, doi. 10.1111/j.1462-2920.2010.02323.x

By:

Sime-Ngando, Télesphore;
Lucas, Soizick;
Robin, Agnès;
Tucker, Kimberly Pause;
Colombet, Jonathan;
Bettarel, Yvan;
Desmond, Elie;
Gribaldo, Simonetta;
Forterre, Patrick;
Breitbart, Mya;
Prangishvili, David

Publication type:

Article

Metagenomic analyses of novel viruses and plasmids from a cultured environmental sample of hyperthermophilic neutrophiles R. A. Garrett et al. Novel viruses and plasmids from hyperthermoneutrophiles.

Published in:

Environmental Microbiology, 2010, v. 12, n. 11, p. 2918, doi. 10.1111/j.1462-2920.2010.02266.x

By:

Garrett, Roger A.;
Prangishvili, David;
Shah, Shiraz A.;
Reuter, Monika;
Stetter, Karl O.;
Peng, Xu

Publication type:

Article

Position paper: The creation of a rational scheme for the nomenclature of viruses of Bacteria and Archaea.

Published in:

2009

By:

Kropinski, Andrew M.;
Prangishvili, David;
Lavigne, Rob

Publication type:

Other

Four newly isolated fuselloviruses from extreme geothermal environments reveal unusual morphologies and a possible interviral recombination mechanism.

Published in:

Environmental Microbiology, 2009, v. 11, n. 11, p. 2849, doi. 10.1111/j.1462-2920.2009.02009.x

By:

Redder, Peter;
Peng, Xu;
Brügger, Kim;
Shah, Shiraz A.;
Roesch, Ferdinand;
Greve, Bo;
She, Qunxin;
Schleper, Christa;
Forterre, Patrick;
Garrett, Roger A.;
Prangishvili, David

Publication type:

Article

Roles of viruses in the environment.

Published in:

2009

By:

Rohwer, Forest;
Prangishvili, David;
Lindell, Debbie

Publication type:

Editorial

The Great Billion-year War between Ribosome- and Capsid-encoding Organisms (Cells and Viruses) as the Major Source of Evolutionary Novelties.

Published in:

Annals of the New York Academy of Sciences, 2009, v. 1178, n. 1, p. 65, doi. 10.1111/j.1749-6632.2009.04993.x

By:

Forterre, Patrick;
Prangishvili, David

Publication type:

Article

Viruses of the Archaea: a unifying view.

Published in:

Nature Reviews Microbiology, 2006, v. 4, n. 11, p. 837, doi. 10.1038/nrmicro1527

By:

Prangishvili, David;
Forterre, Patrick;
Garrett, Roger A.

Publication type:

Article

Crystal structure of AFV3-109, a highly conserved protein from crenarchaeal viruses.

Published in:

Virology Journal, 2007, v. 4, p. 12, doi. 10.1186/1743-422X-4-12

By:

Keller, Jenny;
Leulliot, Nicolas;
Cambillau, Christian;
Campanacci, Valérie;
Porciero, Stéphanie;
Prangishvili, David;
Forterre, Patrick;
Cortez, Diego;
Quevillon-Cheruel, Sophie;
Van Tilbeurgh, Herman

Publication type:

Article

A new proposed taxon for double-stranded DNA viruses, the order 'Ligamenvirales'.

Published in:

Archives of Virology, 2012, v. 157, n. 4, p. 791, doi. 10.1007/s00705-012-1229-7

By:

Prangishvili, David;
Krupovic, Mart

Publication type:

Article

Virology: Independent virus development outside a host.

Published in:

Nature, 2005, v. 436, n. 7054, p. 1101, doi. 10.1038/4361101a

By:

Häring, Monika;
Vestergaard, Gisle;
Rachel, Reinhard;
Chen, Lanming;
Garrett, Roger A.;
Prangishvili, David

Publication type:

Article

The structures of two archaeal type IV pili illuminate evolutionary relationships.

Published in:

Nature Communications, 2020, v. 11, n. 1, p. 1, doi. 10.1038/s41467-020-17268-4

By:

Wang, Fengbin;
Baquero, Diana P.;
Su, Zhangli;
Beltran, Leticia C.;
Prangishvili, David;
Krupovic, Mart;
Egelman, Edward H.

Publication type:

Article

DNA-Interacting Characteristics of the Archaeal Rudiviral Protein SIRV2_Gp1.

Published in:

Viruses (1999-4915), 2017, v. 9, n. 7, p. 190, doi. 10.3390/v9070190

By:

Peeters, Eveline;
Boon, Maarten;
Rollie, Clare;
Willaert, Ronnie G.;
Voet, Marleen;
White, Malcolm F.;
Prangishvili, David;
Lavigne, Rob;
Quax, Tessa E. F.

Publication type:

Article

Solution Structure of an Archaeal DNA Binding Protein with an Eukaryotic Zinc Finger Fold.

Published in:

PLoS ONE, 2013, v. 8, n. 1, p. 1, doi. 10.1371/journal.pone.0052908

By:

Guillière, Florence;
Danioux, Chloé;
Jaubert, Carole;
Desnoues, Nicole;
Delepierre, Muriel;
Prangishvili, David;
Sezonov, Guennadi;
Guijarro, J. Iñaki

Publication type:

Article

Evolution of an archaeal virus nucleocapsid protein from the CRISPR-associated Cas4 nuclease.

Published in:

Biology Direct, 2015, v. 10, p. 1, doi. 10.1186/s13062-015-0093-2

By:

Krupovic, Mart;
Cvirkaite-Krupovic, Virginija;
Prangishvili, David;
Koonin, Eugene V.

Publication type:

Article

The crystal structure of ORF14 from Sulfolobus islandicus filamentous virus.

Published in:

Proteins, 2009, v. 76, n. 4, p. 1020, doi. 10.1002/prot.22448

By:

Goulet, Adeline;
Spinelli, Silvia;
Blangy, Stéphanie;
van Tilbeurgh, Herman;
Leulliot, Nicolas;
Basta, Tamara;
Prangishvili, David;
Cambillau, Christian;
Campanacci, Valérie

Publication type:

Article

Diversity, taxonomy, and evolution of archaeal viruses of the class Caudoviricetes.

Published in:

PLoS Biology, 2021, v. 19, n. 11, p. 1, doi. 10.1371/journal.pbio.3001442

By:

Liu, Ying;
Demina, Tatiana A.;
Roux, Simon;
Aiewsakun, Pakorn;
Kazlauskas, Darius;
Simmonds, Peter;
Prangishvili, David;
Oksanen, Hanna M.;
Krupovic, Mart

Publication type:

Article

Structural basis of RNA polymerase inhibition by viral and host factors.

Published in:

Nature Communications, 2021, v. 12, n. 1, p. 1, doi. 10.1038/s41467-021-25666-5

By:

Pilotto, Simona;
Fouqueau, Thomas;
Lukoyanova, Natalya;
Sheppard, Carol;
Lucas-Staat, Soizick;
Díaz-Santín, Luis Miguel;
Matelska, Dorota;
Prangishvili, David;
Cheung, Alan C. M.;
Werner, Finn

Publication type:

Article

New virus isolates from Italian hydrothermal environments underscore the biogeographic pattern in archaeal virus communities.

Published in:

ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2020, v. 14, n. 7, p. 1821, doi. 10.1038/s41396-020-0653-z

By:

Baquero, Diana P.;
Contursi, Patrizia;
Piochi, Monica;
Bartolucci, Simonetta;
Liu, Ying;
Cvirkaite-Krupovic, Virginija;
Prangishvili, David;
Krupovic, Mart

Publication type:

Article

The thermo- and acido-stable ORF-99 from the archaeal virus AFV1.

Published in:

Protein Science: A Publication of the Protein Society, 2009, v. 18, n. 6, p. 1316, doi. 10.1002/pro.122

By:

Goulet, Adeline;
Spinelli, Silvia;
Blangy, Stéphanie;
van Tilbeurgh, Herman;
Leulliot, Nicolas;
Basta, Tamara;
Prangishvili, David;
Cambillau, Christian;
Campanacci, Valérie

Publication type:

Article