Works by Poudel, Suresh

Results: 18

Insights from 20 years of bacterial genome sequencing.
Published in:
Functional & Integrative Genomics, 2015, v. 15, n. 2, p. 141, doi. 10.1007/s10142-015-0433-4
By:
- Land, Miriam;
- Hauser, Loren;
- Jun, Se-Ran;
- Nookaew, Intawat;
- Leuze, Michael;
- Ahn, Tae-Hyuk;
- Karpinets, Tatiana;
- Lund, Ole;
- Kora, Guruprased;
- Wassenaar, Trudy;
- Poudel, Suresh;
- Ussery, David
Publication type:
Article
Integrated Proteomics and Lipidomics Reveal That the Swarming Motility of Paenibacillus polymyxa Is Characterized by Phospholipid Modification, Surfactant Deployment, and Flagellar Specialization Relative to Swimming Motility.
Published in:
Frontiers in Microbiology, 2019, v. 10, p. 1, doi. 10.3389/fmicb.2019.02594
By:
- Poudel, Suresh;
- Giannone, Richard J.;
- Farmer, Abigail T.;
- Campagna, Shawn R.;
- Bible, Amber N.;
- Morrell-Falvey, Jennifer L.;
- Elkins, James G.;
- Hettich, Robert L.
Publication type:
Article
Coculture with hemicellulose-fermenting microbes reverses inhibition of corn fiber solubilization by Clostridium thermocellum at elevated solids loadings.
Published in:
Biotechnology for Biofuels, 2021, v. 14, n. 1, p. 1, doi. 10.1186/s13068-020-01867-w
By:
- Beri, Dhananjay;
- Herring, Christopher D.;
- Blahova, Sofie;
- Poudel, Suresh;
- Giannone, Richard J.;
- Hettich, Robert L.;
- Lynd, Lee R.
Publication type:
Article
2039. Antibiotic Stewardship in Burn and Chronic Wound Centers in Nepal.
Published in:
Open Forum Infectious Diseases, 2019, v. 6, p. S686, doi. 10.1093/ofid/ofz360.1719
By:
- Nauriyal, Varidhi;
- Joshi, Rajesh Dhoj.;
- Poudel, Suresh Raj;
- Banstola, Laxman;
- Joshi, Anip;
- Acharya, Arjun;
- Thapa, Buddhi Bahadur;
- Shrestha, Basudha;
- Maki, Gina;
- Shakya, Malika;
- Joshi, Nilesh Man.;
- Karki, Kshitij;
- Bajracharya, Deepak;
- Gudipati, Smitha;
- Zervos, Marcus;
- Kaljee, Linda;
- Prentiss, Tyler;
- Rai, Shankar
Publication type:
Article
Peeling back the layers of crassulacean acid metabolism: functional differentiation between Kalanchoë fedtschenkoi epidermis and mesophyll proteomes.
Published in:
Plant Journal, 2020, v. 103, n. 2, p. 869, doi. 10.1111/tpj.14757
By:
- Abraham, Paul E.;
- Hurtado Castano, Natalia;
- Cowan‐Turner, Daniel;
- Barnes, Jeremy;
- Poudel, Suresh;
- Hettich, Robert;
- Flütsch, Sabrina;
- Santelia, Diana;
- Borland, Anne M.
Publication type:
Article
Metaproteomics reveals enzymatic strategies deployed by anaerobic microbiomes to maintain lignocellulose deconstruction at high solids.
Published in:
Nature Communications, 2022, v. 13, n. 1, p. 1, doi. 10.1038/s41467-022-31433-x
By:
- Chirania, Payal;
- Holwerda, Evert K.;
- Giannone, Richard J.;
- Liang, Xiaoyu;
- Poudel, Suresh;
- Ellis, Joseph C.;
- Bomble, Yannick J.;
- Hettich, Robert L.;
- Lynd, Lee R.
Publication type:
Article
The diversity and specificity of the extracellular proteome in the cellulolytic bacterium <italic>Caldicellulosiruptor bescii</italic> is driven by the nature of the cellulosic growth substrate.
Published in:
Biotechnology for Biofuels, 2018, v. 11, p. 1, doi. 10.1186/s13068-018-1076-1
By:
- Poudel, Suresh;
- Giannone, Richard J.;
- Basen, Mirko;
- Nookaew, Intawat;
- Poole, Farris L.;
- Kelly, Robert M.;
- Adams, Michael W. W.;
- Hettich, Robert L.
Publication type:
Article
Integrated omics analyses reveal the details of metabolic adaptation of Clostridium thermocellum to lignocellulose-derived growth inhibitors released during the deconstruction of switchgrass.
Published in:
Biotechnology for Biofuels, 2017, v. 10, p. 1, doi. 10.1186/s13068-016-0697-5
By:
- Poudel, Suresh;
- Giannone, Richard J.;
- Rodriguez Jr., Miguel;
- Raman, Babu;
- Martin, Madhavi Z.;
- Engle, Nancy L.;
- Mielenz, Jonathan R.;
- Nookaew, Intawat;
- Brown, Steven D.;
- Tschaplinski, Timothy J.;
- Ussery, David;
- Hettich, Robert L.
Publication type:
Article
Correction to: Proteomic landscape of Alzheimer's Disease: novel insights into pathogenesis and biomarker discovery.
Published in:
2021
By:
- Bai, Bing;
- Vanderwall, David;
- Li, Yuxin;
- Wang, Xusheng;
- Poudel, Suresh;
- Wang, Hong;
- Dey, Kaushik Kumar;
- Chen, Ping-Chung;
- Yang, Ka;
- Peng, Junmin
Publication type:
Correction Notice
Proteomic landscape of Alzheimer's Disease: novel insights into pathogenesis and biomarker discovery.
Published in:
2021
By:
- Bai, Bing;
- Vanderwall, David;
- Li, Yuxin;
- Wang, Xusheng;
- Poudel, Suresh;
- Wang, Hong;
- Dey, Kaushik Kumar;
- Chen, Ping-Chung;
- Yang, Ka;
- Peng, Junmin
Publication type:
Literature Review
JUMPptm: Integrated software for sensitive identification of post‐translational modifications and its application in Alzheimer's disease study.
Published in:
Proteomics, 2023, v. 23, n. 3/4, p. 1, doi. 10.1002/pmic.202100369
By:
- Poudel, Suresh;
- Vanderwall, David;
- Yuan, Zuo‐Fei;
- Wu, Zhiping;
- Peng, Junmin;
- Li, Yuxin
Publication type:
Article
29‐Plex tandem mass tag mass spectrometry enabling accurate quantification by interference correction.
Published in:
Proteomics, 2022, v. 22, n. 19, p. 1, doi. 10.1002/pmic.202100243
By:
- Sun, Huan;
- Poudel, Suresh;
- Vanderwall, David;
- Lee, Dong Geun;
- Li, Yuxin;
- Peng, Junmin
Publication type:
Article
Identification and characterization of proteins of unknown function (PUFs) in Clostridium thermocellum DSM 1313 strains as potential genetic engineering targets.
Published in:
Biotechnology for Biofuels, 2021, v. 14, n. 1, p. 1, doi. 10.1186/s13068-021-01964-4
By:
- Poudel, Suresh;
- Cope, Alexander L.;
- O’Dell, Kaela B.;
- Guss, Adam M.;
- Seo, Hyeongmin;
- Trinh, Cong T.;
- Hettich, Robert L.
Publication type:
Article
An adaptive stress response that confers cellular resilience to decreased ubiquitination.
Published in:
Nature Communications, 2023, v. 14, n. 1, p. 1, doi. 10.1038/s41467-023-43262-7
By:
- Hunt, Liam C.;
- Pagala, Vishwajeeth;
- Stephan, Anna;
- Xie, Boer;
- Kodali, Kiran;
- Kavdia, Kanisha;
- Wang, Yong-Dong;
- Shirinifard, Abbas;
- Curley, Michelle;
- Graca, Flavia A.;
- Fu, Yingxue;
- Poudel, Suresh;
- Li, Yuxin;
- Wang, Xusheng;
- Tan, Haiyan;
- Peng, Junmin;
- Demontis, Fabio
Publication type:
Article
Impact of Fatty-Acid Labeling of Bacillus subtilis Membranes on the Cellular Lipidome and Proteome.
Published in:
Frontiers in Microbiology, 2020, v. 11, p. 1, doi. 10.3389/fmicb.2020.00914
By:
- Nickels, Jonathan D.;
- Poudel, Suresh;
- Chatterjee, Sneha;
- Farmer, Abigail;
- Cordner, Destini;
- Campagna, Shawn R.;
- Giannone, Richard J.;
- Hettich, Robert L.;
- Myles, Dean A. A.;
- Standaert, Robert F.;
- Katsaras, John;
- Elkins, James G.
Publication type:
Article
Meta-omics-aided isolation of an elusive anaerobic arsenic-methylating soil bacterium.
Published in:
ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2022, v. 16, n. 7, p. 1740, doi. 10.1038/s41396-022-01220-z
By:
- Viacava, Karen;
- Qiao, Jiangtao;
- Janowczyk, Andrew;
- Poudel, Suresh;
- Jacquemin, Nicolas;
- Meibom, Karin Lederballe;
- Shrestha, Him K.;
- Reid, Matthew C.;
- Hettich, Robert L.;
- Bernier-Latmani, Rizlan
Publication type:
Article
Evaluation of an Antimicrobial Stewardship Program for Wound and Burn Care in Three Hospitals in Nepal.
Published in:
Antibiotics (2079-6382), 2020, v. 9, n. 12, p. 914, doi. 10.3390/antibiotics9120914
By:
- Nauriyal, Varidhi;
- Rai, Shankar Man;
- Joshi, Rajesh Dhoj;
- Thapa, Buddhi Bahadur;
- Kaljee, Linda;
- Prentiss, Tyler;
- Maki, Gina;
- Shrestha, Basudha;
- Bajracharya, Deepak C.;
- Karki, Kshitij;
- Joshi, Nilesh;
- Acharya, Arjun;
- Banstola, Laxman;
- Poudel, Suresh Raj;
- Joshi, Anip;
- Dahal, Abhinav;
- Palikhe, Niranjan;
- Khadka, Sachin;
- Giri, Piyush;
- Lamichhane, Apar
Publication type:
Article
JUMPm: A Tool for Large-Scale Identification of Metabolites in Untargeted Metabolomics.
Published in:
Metabolites (2218-1989), 2020, v. 10, n. 5, p. 190, doi. 10.3390/metabo10050190
By:
- Wang, Xusheng;
- Cho, Ji-Hoon;
- Poudel, Suresh;
- Li, Yuxin;
- Jones, Drew R.;
- Shaw, Timothy I.;
- Tan, Haiyan;
- Xie, Boer;
- Peng, Junmin
Publication type:
Article