Works by Polz, Martin F.

Results: 42

Heteroduplexes in mixed-template amplifications: formation, consequence and elimination by ‘reconditioning PCR’.

Published in:

Nucleic Acids Research, 2002, v. 30, n. 9, p. 2083, doi. 10.1093/nar/30.9.2083

By:

Thompson, Janelle R.;
Marcelino, Luisa A.;
Polz, Martin F.

Publication type:

Article

Explaining microbial genomic diversity in light of evolutionary ecology.

Published in:

Nature Reviews Microbiology, 2014, v. 12, n. 4, p. 263, doi. 10.1038/nrmicro3218

By:

Cordero, Otto X.;
Polz, Martin F.

Publication type:

Article

High resolution time series reveals cohesive but short-lived communities in coastal plankton.

Published in:

Nature Communications, 2018, v. 9, n. 1, p. 1, doi. 10.1038/s41467-017-02571-4

By:

Martin-Platero, Antonio M.;
Cleary, Brian;
Kauffman, Kathryn;
Preheim, Sarah P.;
McGillicuddy Jr., Dennis J.;
Alm, Eric J.;
Polz, Martin F.

Publication type:

Article

Physiological basis for atmospheric methane oxidation and methanotrophic growth on air.

Published in:

Nature Communications, 2024, v. 15, n. 1, p. 1, doi. 10.1038/s41467-024-48197-1

By:

Schmider, Tilman;
Hestnes, Anne Grethe;
Brzykcy, Julia;
Schmidt, Hannes;
Schintlmeister, Arno;
Roller, Benjamin R. K.;
Teran, Ezequiel Jesús;
Söllinger, Andrea;
Schmidt, Oliver;
Polz, Martin F.;
Richter, Andreas;
Svenning, Mette M.;
Tveit, Alexander T.

Publication type:

Article

Physiological basis for atmospheric methane oxidation and methanotrophic growth on air.

Published in:

Nature Communications, 2024, v. 15, n. 1, p. 1, doi. 10.1038/s41467-024-48197-1

By:

Schmider, Tilman;
Hestnes, Anne Grethe;
Brzykcy, Julia;
Schmidt, Hannes;
Schintlmeister, Arno;
Roller, Benjamin R. K.;
Teran, Ezequiel Jesús;
Söllinger, Andrea;
Schmidt, Oliver;
Polz, Martin F.;
Richter, Andreas;
Svenning, Mette M.;
Tveit, Alexander T.

Publication type:

Article

Comparative genomics of pathogenic lineages of Vibrio nigripulchritudo identifies virulence-associated traits.

Published in:

ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2013, v. 7, n. 10, p. 1985, doi. 10.1038/ismej.2013.90

By:

Goudenège, David;
Labreuche, Yannick;
Krin, Evelyne;
Ansquer, Dominique;
Mangenot, Sophie;
Calteau, Alexandra;
Médigue, Claudine;
Mazel, Didier;
Polz, Martin F;
Le Roux, Frédérique

Publication type:

Article

Reproducibility of Vibrionaceae population structure in coastal bacterioplankton.

Published in:

ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2013, v. 7, n. 3, p. 509, doi. 10.1038/ismej.2012.134

By:

Szabo, Gitta;
Preheim, Sarah P;
Kauffman, Kathryn M;
David, Lawrence A;
Shapiro, Jesse;
Alm, Eric J;
Polz, Martin F

Publication type:

Article

Shape and evolution of the fundamental niche in marine Vibrio.

Published in:

ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2012, v. 6, n. 12, p. 2168, doi. 10.1038/ismej.2012.65

By:

Materna, Arne C;
Friedman, Jonathan;
Bauer, Claudia;
David, Christina;
Chen, Sara;
Huang, Ivy B;
Gillens, April;
Clarke, Sean A;
Polz, Martin F;
Alm, Eric J

Publication type:

Article

Diversity of active marine picoeukaryotes in the Eastern Mediterranean Sea unveiled using photosystem-II psbA transcripts.

Published in:

ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2010, v. 4, n. 8, p. 1044, doi. 10.1038/ismej.2010.25

By:

Man-Aharonovich, Dikla;
Philosof, Alon;
Kirkup, Benjamin C.;
Le Gall, Florence;
Yogev, Tali;
Berman-Frank, Ilana;
Polz, Martin F;
Vaulot, Daniel;
Béjà, Oded

Publication type:

Article

Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas.

Published in:

ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2007, v. 1, n. 1, p. 48, doi. 10.1038/ismej.2007.10

By:

Sabehi, Gazalah;
Kirkup, Benjamin C.;
Rozenberg, Mira;
Stambler, Noga;
Polz, Martin F.;
Béjà, Oded

Publication type:

Article

Vibro chromosomes share common history.

Published in:

BMC Microbiology, 2010, v. 10, p. 137, doi. 10.1186/1471-2180-10-137

By:

Kirkup, Jr, Benjamin C.;
LeeAnn Chang;
Sarah Chang;
Gevers, Dirk;
Polz, Martin F.

Publication type:

Article

Evidence for Ecological Flexibility in the Cosmopolitan Genus Curtobacterium.

Published in:

Frontiers in Microbiology, 2016, v. 7, p. 1, doi. 10.3389/fmicb.2016.01874

By:

Chase, Alexander B.;
Arevalo, Philip;
Polz, Martin F.;
Berlemont, Renaud;
Martiny, Jennifer B. H.;
Antonielli, Livio;
Poire, Erick Cardenas

Publication type:

Article

A simple and efficient method for concentration of ocean viruses by chemical flocculation.

Published in:

Environmental Microbiology Reports, 2011, v. 3, n. 6, p. 809, doi. 10.1111/j.1758-2229.2011.00301.x

By:

John, Seth G.;
Mendez, Carolina B.;
Deng, Li;
Poulos, Bonnie;
Kauffman, Anne Kathryn M.;
Kern, Suzanne;
Brum, Jennifer;
Polz, Martin F.;
Boyle, Edward A.;
Sullivan, Matthew B.

Publication type:

Article

A simple and efficient method for concentration of ocean viruses by chemical flocculation.

Published in:

Environmental Microbiology Reports, 2011, v. 3, n. 2, p. 195, doi. 10.1111/j.1758-2229.2010.00208.x

By:

John, Seth G.;
Mendez, Carolina B.;
Li Deng;
Poulos, Bonnie;
Kauffman, Anne Kathryn M.;
Kern, Suzanne;
Brum, Jennifer;
Polz, Martin F.;
Boyle, Edward A.;
Sullivan, Matthew B.

Publication type:

Article

Trophic ecology of massive shrimp aggregations at a Mid-Atlantic Ridge hydrothermal vent site.

Published in:

Limnology & Oceanography, 1998, v. 43, n. 7, p. 1631, doi. 10.4319/lo.1998.43.7.1631

By:

Polz, Martin F.;
Robinson, Jonathan J.;
Cavanaugh, Colleen M.;
Van Dover, Cindy L.

Publication type:

Article

Culture‐independent tracking of Vibrio cholerae lineages reveals complex spatiotemporal dynamics in a natural population.

Published in:

Environmental Microbiology, 2020, v. 22, n. 10, p. 4244, doi. 10.1111/1462-2920.14921

By:

Kirchberger, Paul C.;
Orata, Fabini D.;
Nasreen, Tania;
Kauffman, Kathryn M.;
Tarr, Cheryl L.;
Case, Rebecca J.;
Polz, Martin F.;
Boucher, Yann F.

Publication type:

Article

Natural resource landscapes of a marine bacterium reveal distinct fitness-determining genes across the genome.

Published in:

Environmental Microbiology, 2017, v. 19, n. 6, p. 2422, doi. 10.1111/1462-2920.13765

By:

Takemura, Alison F.;
Corzett, Christopher H.;
Hussain, Fatima;
Arevalo, Philip;
Datta, Manoshi;
Yu, Xiaoqian;
Le Roux, Frederique;
Polz, Martin F.

Publication type:

Article

Population genomics of the symbiotic plasmids of sympatric nitrogen-fixing Rhizobium species associated with Phaseolus vulgaris.

Published in:

Environmental Microbiology, 2016, v. 18, n. 8, p. 2660, doi. 10.1111/1462-2920.13415

By:

Pérez Carrascal, Olga M.;
VanInsberghe, David;
Juárez, Soledad;
Polz, Martin F.;
Vinuesa, Pablo;
González, Víctor

Publication type:

Article

Metapopulation structure of Vibrionaceae among coastal marine invertebrates.

Published in:

Environmental Microbiology, 2011, v. 13, n. 1, p. 265, doi. 10.1111/j.1462-2920.2010.02328.x

By:

Preheim, Sarah P.;
Boucher, Yan;
Wildschutte, Hans;
David, Lawrence A.;
Veneziano, Daniele;
Alm, Eric J.;
Polz, Martin F.

Publication type:

Article

O-antigen diversity and lateral transfer of the wbe region among Vibrio splendidus isolates H. Wildschutte, S. P. Preheim, Y. Hernandez and M. F. Polz O-antigen diversity among Vibrio splendidus.

Published in:

Environmental Microbiology, 2010, v. 12, n. 11, p. 2977, doi. 10.1111/j.1462-2920.2010.02274.x

By:

Wildschutte, Hans;
Preheim, Sarah P.;
Hernandez, Yasiel;
Polz, Martin F.

Publication type:

Article

Genome sequence of Vibrio splendidus: an abundant planctonic marine species with a large genotypic diversity.

Published in:

Environmental Microbiology, 2009, v. 11, n. 8, p. 1959, doi. 10.1111/j.1462-2920.2009.01918.x

By:

Le Roux, Frédérique;
Zouine, Mohamed;
Chakroun, Nesrine;
Binesse, Johan;
Saulnier, Denis;
Bouchier, Christiane;
Zidane, Nora;
Ma, Laurence;
Rusniok, Christophe;
Lajus, Aurélie;
Buchrieser, Carmen;
Médigue, Claudine;
Polz, Martin F.;
Mazel, Didier

Publication type:

Article

High overall diversity and dominance of microdiverse relationships in salt marsh sulphate-reducing bacteria.

Published in:

Environmental Microbiology, 2004, v. 6, n. 7, p. 686, doi. 10.1111/j.1462-2920.2004.00600.x

By:

Klepac-Ceraj, Vanja;
Bahr, Michele;
Crump, Byron C.;
Teske, Andreas P.;
Hobbie, John E.;
Polz, Martin F.

Publication type:

Article

ACID: annotation of cassette and integron data.

Published in:

BMC Bioinformatics, 2009, v. 10, p. 1, doi. 10.1186/1471-2105-10-118

By:

Joss, Michael J.;
Koenig, Jeremy E.;
Labbate, Maurizio;
Polz, Martin F.;
Gillings, Michael R.;
Stokes, Harold W.;
Doolittle, W. Ford;
Boucher, Yan

Publication type:

Article

Genomic Features for Desiccation Tolerance and Sugar Biosynthesis in the Extremophile Gloeocapsopsis sp. UTEX B3054.

Published in:

Frontiers in Microbiology, 2019, p. N.PAG, doi. 10.3389/fmicb.2019.00950

By:

Urrejola, Catalina;
Alcorta, Jaime;
Salas, Loreto;
Vásquez, Mónica;
Polz, Martin F.;
Vicuña, Rafael;
Díez, Beatriz

Publication type:

Article

Adaptive radiation by waves of gene transfer leads to fine-scale resource partitioning in marine microbes.

Published in:

Nature Communications, 2016, v. 7, n. 9, p. 12860, doi. 10.1038/ncomms12860

By:

Hehemann, Jan-Hendrik;
Arevalo, Philip;
Datta, Manoshi S.;
Yu, Xiaoqian;
Corzett, Christopher H.;
Henschel, Andreas;
Preheim, Sarah P.;
Timberlake, Sonia;
Alm, Eric J.;
Polz, Martin F.

Publication type:

Article

Microbial interactions lead to rapid micro-scale successions on model marine particles.

Published in:

Nature Communications, 2016, v. 7, n. 6, p. 11965, doi. 10.1038/ncomms11965

By:

Datta, Manoshi S.;
Sliwerska, Elzbieta;
Gore, Jeff;
Polz, Martin F.;
Cordero, Otto X.

Publication type:

Article

Fine-scale phylogenetic architecture of a complex bacterial community.

Published in:

Nature, 2004, v. 430, n. 6999, p. 551, doi. 10.1038/nature02649

By:

Acinas, Silvia G.;
Klepac-Ceraj, Vanja;
Hunt, Dana E.;
Pharino, Chanathip;
Ceraj, Ivica;
Distel, Daniel L.;
Polz, Martin F.

Publication type:

Article

Successional dynamics and alternative stable states in a saline activated sludge microbial community over 9 years.

Published in:

Microbiome, 2021, v. 9, n. 1, p. 1, doi. 10.1186/s40168-021-01151-5

By:

Wang, Yulin;
Ye, Jun;
Ju, Feng;
Liu, Lei;
Boyd, Joel A.;
Deng, Yu;
Parks, Donovan H.;
Jiang, Xiaotao;
Yin, Xiaole;
Woodcroft, Ben J.;
Tyson, Gene W.;
Hugenholtz, Philip;
Polz, Martin F.;
Zhang, Tong

Publication type:

Article

Redox-informed models of global biogeochemical cycles.

Published in:

Nature Communications, 2020, v. 11, n. 1, p. N.PAG, doi. 10.1038/s41467-020-19454-w

By:

Zakem, Emily J.;
Polz, Martin F.;
Follows, Michael J.

Publication type:

Article

Correction to: Summer phyto‑ and bacterioplankton communities during low and high productivity scenarios in the Western Antarctic Peninsula.

Published in:

2021

By:

Fuentes, Sebastián;
Arroyo, José Ignacio;
Rodriguez‑Marconi, Susana;
Masotti, Italo;
Alarcon‑Schumacher, Tomás;
Polz, Martin F.;
Trefault, Nicole;
De la Iglesia, Rodrigo;
Díez, Beatriz

Publication type:

Correction Notice

Summer phyto- and bacterioplankton communities during low and high productivity scenarios in the Western Antarctic Peninsula.

Published in:

Polar Biology, 2019, v. 42, n. 1, p. 159, doi. 10.1007/s00300-018-2411-5

By:

Fuentes, Sebastián;
Arroyo, José Ignacio;
Rodríguez-Marconi, Susana;
Masotti, Italo;
Alarcón-Schumacher, Tomás;
Polz, Martin F.;
Trefault, Nicole;
De la Iglesia, Rodrigo;
Díez, Beatriz

Publication type:

Article

A supervised learning approach for taxonomic classification of core-photosystem-II genes and transcripts in the marine environment.

Published in:

BMC Genomics, 2009, v. 10, p. 1, doi. 10.1186/1471-2164-10-229

By:

Tzahor, Shani;
Man-Aharonovich, Dikla;
Kirkup, Benjamin C.;
Yogev, Tali;
Berman-Frank, Ilana;
Polz, Martin F.;
Béjè, Oded;
Mandel-Gutfreund, Yael

Publication type:

Article

Resolving the structure of phage–bacteria interactions in the context of natural diversity.

Published in:

Nature Communications, 2022, v. 13, n. 1, p. 1, doi. 10.1038/s41467-021-27583-z

By:

Kauffman, Kathryn M.;
Chang, William K.;
Brown, Julia M.;
Hussain, Fatima A.;
Yang, Joy;
Polz, Martin F.;
Kelly, Libusha

Publication type:

Article

Prokaryotic viruses impact functional microorganisms in nutrient removal and carbon cycle in wastewater treatment plants.

Published in:

Nature Communications, 2021, v. 12, n. 1, p. 1, doi. 10.1038/s41467-021-25678-1

By:

Chen, Yiqiang;
Wang, Yulin;
Paez-Espino, David;
Polz, Martin F.;
Zhang, Tong

Publication type:

Article

Interactions in self-assembled microbial communities saturate with diversity.

Published in:

ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2019, v. 13, n. 6, p. 1602, doi. 10.1038/s41396-019-0356-5

By:

Yu, Xiaoqian;
Polz, Martin F.;
Alm, Eric J.

Publication type:

Article

Bacterial community structure in a sympagic habitat expanding with global warming: brackish ice brine at 85-90 °N.

Published in:

ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2019, v. 13, n. 2, p. 316, doi. 10.1038/s41396-018-0268-9

By:

Fernández-Gómez, Beatriz;
Díez, Beatriz;
Polz, Martin F.;
Arroyo, José Ignacio;
Alfaro, Fernando D.;
Marchandon, Germán;
Sanhueza, Cynthia;
Farías, Laura;
Trefault, Nicole;
Marquet, Pablo A.;
Molina-Montenegro, Marco A.;
Sylvander, Peter;
Snoeijs-Leijonmalm, Pauline

Publication type:

Article

Ancestral gene acquisition as the key to virulence potential in environmental Vibrio populations.

Published in:

ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2018, v. 12, n. 12, p. 2954, doi. 10.1038/s41396-018-0245-3

By:

Bruto, Maxime;
Labreuche, Yannick;
James, Adèle;
Piel, Damien;
Chenivesse, Sabine;
Petton, Bruno;
Polz, Martin F.;
Le Roux, Frédérique

Publication type:

Article

Inter-individual variability in copepod microbiomes reveals bacterial networks linked to host physiology.

Published in:

ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2018, v. 12, n. 9, p. 2103, doi. 10.1038/s41396-018-0182-1

By:

Datta, Manoshi S.;
Almada, Amalia A.;
Baumgartner, Mark F.;
Mincer, Tracy J.;
Tarrant, Ann M.;
Polz, Martin F.

Publication type:

Article

Vibrio crassostreae, a benign oyster colonizer turned into a pathogen after plasmid acquisition.

Published in:

ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2017, v. 11, n. 4, p. 1043, doi. 10.1038/ismej.2016.162

By:

Bruto, Maxime;
James, Adèle;
Petton, Bruno;
Labreuche, Yannick;
Chenivesse, Sabine;
Alunno-Bruscia, Marianne;
Polz, Martin F;
Le Roux, Frédérique

Publication type:

Article

Endemicity of the cosmopolitan mesophilic chemolithoautotroph Sulfurimonas at deep-sea hydrothermal vents.

Published in:

ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2017, v. 11, n. 4, p. 909, doi. 10.1038/ismej.2016.178

By:

Mino, Sayaka;
Nakagawa, Satoshi;
Makita, Hiroko;
Toki, Tomohiro;
Miyazaki, Junichi;
Sievert, Stefan M;
Polz, Martin F;
Inagaki, Fumio;
Godfroy, Anne;
Kato, Shingo;
Watanabe, Hiromi;
Nunoura, Takuro;
Nakamura, Koichi;
Imachi, Hiroyuki;
Watsuji, Tomo-o;
Kojima, Shigeaki;
Takai, Ken;
Sawabe, Tomoo

Publication type:

Article

Direct single-cell biomass estimates for marine bacteria via Archimedes' principle.

Published in:

ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2017, v. 11, n. 3, p. 825, doi. 10.1038/ismej.2016.161

By:

Cermak, Nathan;
Becker, Jamie W;
Knudsen, Scott M;
Chisholm, Sallie W;
Manalis, Scott R;
Polz, Martin F

Publication type:

Article

A genomic comparison of 13 symbiotic Vibrio fischeri isolates from the perspective of their host source and colonization behavior.

Published in:

ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2016, v. 10, n. 12, p. 2907, doi. 10.1038/ismej.2016.69

By:

Bongrand, Clotilde;
Koch, Eric J;
Moriano-Gutierrez, Silvia;
Cordero, Otto X;
McFall-Ngai, Margaret;
Polz, Martin F;
Ruby, Edward G

Publication type:

Article