Found: 10

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  • High-throughput robust single-cell DNA methylation profiling with sciMETv2.

    Published in:
    Nature Communications, 2022, v. 13, n. 1, p. 1, doi. 10.1038/s41467-022-35374-3
    By:
    • Nichols, Ruth V.;
    • O'Connell, Brendan L.;
    • Mulqueen, Ryan M.;
    • Thomas, Jerushah;
    • Woodfin, Ashley R.;
    • Acharya, Sonia;
    • Mandel, Gail;
    • Pokholok, Dmitry;
    • Steemers, Frank J.;
    • Adey, Andrew C.
    Publication type:
    Article

  • Computational Analysis of Whole-Genome Differential Allelic Expression Data in Human.

    Published in:
    PLoS Computational Biology, 2010, v. 6, n. 7, p. 1, doi. 10.1371/journal.pcbi.1000849
    By:
    • Wagner, James R.;
    • Bing Ge;
    • Pokholok, Dmitry;
    • Gunderson, Kevin L.;
    • Pastinen, Tomi;
    • Blanchette, Mathieu
    Publication type:
    Article

  • Genome-wide assessment of imprinted expression in human cells.

    Published in:
    Genome Biology, 2011, v. 12, n. 3, p. 1, doi. 10.1186/gb-2011-12-3-r25
    By:
    • Morcos, Lisanne;
    • Ge, Bing;
    • Koka, Vonda;
    • Lam, Kevin C. L.;
    • Pokholok, Dmitry K.;
    • Gunderson, Kevin L.;
    • Montpetit, Alexandre;
    • Verlaan, Dominique J.;
    • Pastinen, Tomi
    Publication type:
    Article

  • High-content single-cell combinatorial indexing.

    Published in:
    Nature Biotechnology, 2021, v. 39, n. 12, p. 1574, doi. 10.1038/s41587-021-00962-z
    By:
    • Mulqueen, Ryan M.;
    • Pokholok, Dmitry;
    • O'Connell, Brendan L.;
    • Thornton, Casey A.;
    • Zhang, Fan;
    • O'Roak, Brian J.;
    • Link, Jason;
    • Yardımcı, Galip Gürkan;
    • Sears, Rosalie C.;
    • Steemers, Frank J.;
    • Adey, Andrew C.
    Publication type:
    Article

  • Droplet-based combinatorial indexing for massive-scale single-cell chromatin accessibility.

    Published in:
    Nature Biotechnology, 2019, v. 37, n. 8, p. 916, doi. 10.1038/s41587-019-0147-6
    By:
    • Lareau, Caleb A.;
    • Duarte, Fabiana M.;
    • Chew, Jennifer G.;
    • Kartha, Vinay K.;
    • Burkett, Zach D.;
    • Kohlway, Andrew S.;
    • Pokholok, Dmitry;
    • Aryee, Martin J.;
    • Steemers, Frank J.;
    • Lebofsky, Ronald;
    • Buenrostro, Jason D.
    Publication type:
    Article

  • Global patterns of cis variation in human cells revealed by high-density allelic expression analysis.

    Published in:
    Nature Genetics, 2009, v. 41, n. 11, p. 1216, doi. 10.1038/ng.473
    By:
    • Ge, Bing;
    • Pokholok, Dmitry K.;
    • Kwan, Tony;
    • Grundberg, Elin;
    • Morcos, Lisanne;
    • Verlaan, Dominique J.;
    • Le, Jennie;
    • Koka, Vonda;
    • Lam, Kevin C. L.;
    • Gagné, Vincent;
    • Dias, Joana;
    • Hoberman, Rose;
    • Montpetit, Alexandre;
    • Joly, Marie-Michele;
    • Harvey, Edward J.;
    • Sinnett, Daniel;
    • Beaulieu, Patrick;
    • Hamon, Robert;
    • Graziani, Alexandru;
    • Dewar, Ken
    Publication type:
    Article

  • Highly scalable generation of DNA methylation profiles in single cells.

    Published in:
    Nature Biotechnology, 2018, v. 36, n. 5, p. 428, doi. 10.1038/nbt.4112
    By:
    • Mulqueen, Ryan M;
    • Pokholok, Dmitry;
    • Norberg, Steven J;
    • Torkenczy, Kristof A;
    • Fields, Andrew J;
    • Sun, Duanchen;
    • Sinnamon, John R;
    • Shendure, Jay;
    • Trapnell, Cole;
    • O'Roak, Brian J;
    • Xia, Zheng;
    • Steemers, Frank J;
    • Adey, Andrew C
    Publication type:
    Article

  • Haplotype phasing of whole human genomes using bead-based barcode partitioning in a single tube.

    Published in:
    Nature Biotechnology, 2017, v. 35, n. 9, p. 852, doi. 10.1038/nbt.3897
    By:
    • Zhang, Fan;
    • Christiansen, Lena;
    • Thomas, Jerushah;
    • Pokholok, Dmitry;
    • Jackson, Ros;
    • Morrell, Natalie;
    • Zhao, Yannan;
    • Wiley, Melissa;
    • Welch, Emily;
    • Jaeger, Erich;
    • Granat, Ana;
    • Norberg, Steven J;
    • Halpern, Aaron;
    • C Rogert, Maria;
    • Ronaghi, Mostafa;
    • Shendure, Jay;
    • Gormley, Niall;
    • Gunderson, Kevin L;
    • Steemers, Frank J
    Publication type:
    Article

  • Erratum: High-resolution computational models of genome binding events.

    Published in:
    2006
    By:
    • Qi, Yuan;
    • Rolfe, Alex;
    • MacIsaac, Kenzie D;
    • Gerber, Georg K;
    • Pokholok, Dmitry;
    • Zeitlinger, Julia;
    • Danford, Timothy;
    • Dowell, Robin D;
    • Fraenkel, Ernest;
    • Jaakkola, Tommi S;
    • Young, Richard A;
    • Gifford, David K
    Publication type:
    Correction notice

  • High-resolution computational models of genome binding events.

    Published in:
    Nature Biotechnology, 2006, v. 24, n. 8, p. 963, doi. 10.1038/nbt1233
    By:
    • Yuan Qi;
    • Rolfe, Alex;
    • MacIsaac, Kenzie D.;
    • Gerber, Georg K.;
    • Pokholok, Dmitry;
    • Zeitlinger, Julia;
    • Danford, Timothy;
    • Dowell, Robin D.;
    • Fraenkel, Ernest;
    • Jaakkola, Tommi S.;
    • Young, Richard A.;
    • Gifford, David K.
    Publication type:
    Article