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AMBIENT: Active Modules for Bipartite Networks - using high-throughput transcriptomic data to dissect metabolic response.
- Published in:
- BMC Systems Biology, 2013, v. 7, n. 1, p. 1, doi. 10.1186/1752-0509-7-26
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- Publication type:
- Article
The biological context of HIV-1 host interactionsreveals subtle insights into a system hijack.
- Published in:
- BMC Systems Biology, 2010, v. 4, p. 80, doi. 10.1186/1752-0509-4-80
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- Publication type:
- Article
Low complexity regions within protein sequences have position-dependent roles.
- Published in:
- BMC Systems Biology, 2010, v. 4, p. 43, doi. 10.1186/1752-0509-4-43
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- Publication type:
- Article
SHARKview: a tool for the visualization of systems biology data.
- Published in:
- 2007
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- Publication type:
- Abstract
Intrahost speciations and host switches played an important role in the evolution of herpesviruses.
- Published in:
- Virus Evolution, 2021, v. 7, n. 1, p. 1, doi. 10.1093/ve/veab025
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- Publication type:
- Article
The evolution of protein domain repertoires: Shedding light on the origins of the Herpesviridae family.
- Published in:
- Virus Evolution, 2020, v. 6, n. 1, p. 1, doi. 10.1093/ve/veaa001
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- Publication type:
- Article
The Arabidopsis co-expression tool (ACT): a WWW-based tool and database for microarray-based gene expression analysis.
- Published in:
- Plant Journal, 2006, v. 46, n. 2, p. 336, doi. 10.1111/j.1365-313X.2006.02681.x
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- Publication type:
- Article
Protein-protein interaction networks and biology—what's the connection?
- Published in:
- Nature Biotechnology, 2008, v. 26, n. 1, p. 69, doi. 10.1038/nbt0108-69
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- Publication type:
- Article
Modular Biological Function Is Most Effectively Captured by Combining Molecular Interaction Data Types
- Published in:
- PLoS ONE, 2013, v. 8, n. 5, p. 1, doi. 10.1371/journal.pone.0062670
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- Publication type:
- Article
A Unique Dual Activity Amino Acid Hydroxylase in Toxoplasma gondii.
- Published in:
- PLoS ONE, 2009, v. 4, n. 3, p. 1, doi. 10.1371/journal.pone.0004801
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- Publication type:
- Article
Heat Stress Enhances the Accumulation of Polyadenylated Mitochondrial Transcripts in Arabidopsis thaliana.
- Published in:
- PLoS ONE, 2008, v. 3, n. 8, p. 1, doi. 10.1371/journal.pone.0002889
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- Publication type:
- Article
PathwayBooster: a tool to support the curation of metabolic pathways.
- Published in:
- BMC Bioinformatics, 2015, v. 16, n. 1, p. 1, doi. 10.1186/s12859-014-0447-2
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- Publication type:
- Article
PathwayBooster: a tool to support the curation of metabolic pathways.
- Published in:
- BMC Bioinformatics, 2015, v. 16, n. 1, p. 1, doi. 10.1186/s12859-014-0447-2
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- Publication type:
- Article
JNets: Exploring networks by integrating annotation.
- Published in:
- BMC Bioinformatics, 2009, v. 10, p. 1, doi. 10.1186/1471-2105-10-95
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- Publication type:
- Article
Methodology capture: discriminating between the "best" and the rest of community practice.
- Published in:
- BMC Bioinformatics, 2008, v. 9, p. 1, doi. 10.1186/1471-2105-9-359
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- Publication type:
- Article
Arabidopsis Co-expression Tool (ACT): web server tools for microarray-based gene expression analysis.
- Published in:
- Nucleic Acids Research, 2006, v. 34, n. 11, p. w504, doi. 10.1093/nar/gkl204
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- Publication type:
- Article
metaSHARK: a WWW platform for interactive exploration of metabolic networks.
- Published in:
- Nucleic Acids Research, 2006, v. 34, n. 11, p. w725, doi. 10.1093/nar/gkl196
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- Publication type:
- Article
metaSHARK: software for automated metabolic network prediction from DNA sequence and its application to the genomes of Plasmodium falciparum and Eimeria tenella.
- Published in:
- Nucleic Acids Research, 2005, v. 33, n. 4, p. 1399, doi. 10.1093/nar/gki285
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- Publication type:
- Article
Patterns of HIV-1 Protein Interaction Identify Perturbed Host-Cellular Subsystems.
- Published in:
- PLoS Computational Biology, 2010, v. 6, n. 7, p. 1, doi. 10.1371/journal.pcbi.1000863
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- Publication type:
- Article
Identifying the Important HIV-1 Recombination Breakpoints.
- Published in:
- PLoS Computational Biology, 2008, v. 4, n. 9, p. 1, doi. 10.1371/journal.pcbi.1000178
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- Publication type:
- Article
Protein-Protein Interactions in Virus-Host Systems.
- Published in:
- Frontiers in Microbiology, 2017, p. 1, doi. 10.3389/fmicb.2017.01557
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- Publication type:
- Article
From evidence to inference: probing the evolution of protein interaction networks.
- Published in:
- 2009
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- Publication type:
- Opinion
Back to basics – how the evolution of the extracellular matrix underpinned vertebrate evolution.
- Published in:
- International Journal of Experimental Pathology, 2009, v. 90, n. 2, p. 95, doi. 10.1111/j.1365-2613.2008.00637.x
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- Publication type:
- Article
Making the right connections: biological networks in the light of evolution.
- Published in:
- BioEssays, 2009, v. 31, n. 10, p. 1080, doi. 10.1002/bies.200900043
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- Publication type:
- Article
Deciphering the response of Mycobacterium smegmatis to nitrogen stress using bipartite active modules.
- Published in:
- BMC Genomics, 2013, v. 14, n. 1, p. 1, doi. 10.1186/1471-2164-14-436
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- Publication type:
- Article
Bioinformatic analysis of the neprilysin (M13) family of peptidases reveals complex evolutionary and functional relationships.
- Published in:
- BMC Evolutionary Biology, 2008, v. 8, p. 1, doi. 10.1186/1471-2148-8-16
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- Publication type:
- Article
Simple topological properties predict functional misannotations in a metabolic network.
- Published in:
- Bioinformatics, 2013, v. 29, n. 13, p. i154, doi. 10.1093/bioinformatics/btt236
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- Publication type:
- Article
Proteomic Analysis of Integrin-Associated Complexes Identifies RCC2 as a Dual Regulator of Rac1 and Arf6.
- Published in:
- Science Signaling, 2009, v. 2, n. 87, p. 1, doi. 10.1126/scisignal.2000396
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- Publication type:
- Article