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Predicting breast cancer drug response using a multiple-layer cell line drug response network model.
- Published in:
- 2021
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- Publication type:
- journal article
Prkar1a is an osteosarcoma tumor suppressor that defines a molecular subclass in mice.
- Published in:
- 2010
- By:
- Publication type:
- journal article
Automated Counting of Cancer Cells by Ensembling Deep Features.
- Published in:
- Cells (2073-4409), 2019, v. 8, n. 9, p. 1019, doi. 10.3390/cells8091019
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- Publication type:
- Article
Deep clustering of small molecules at large-scale via variational autoencoder embedding and K-means.
- Published in:
- BMC Bioinformatics, 2022, v. 23, n. 1, p. 1, doi. 10.1186/s12859-022-04667-1
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- Publication type:
- Article
Erratum: A genotype resource for postmortem brain samples from the Autism Tissue Program.
- Published in:
- Autism Research: Official Journal of the International Society for Autism Research, 2011, v. 4, n. 4, p. 314, doi. 10.1002/aur.211
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- Publication type:
- Article
A genotype resource for postmortem brain samples from the Autism Tissue Program.
- Published in:
- Autism Research: Official Journal of the International Society for Autism Research, 2011, v. 4, n. 2, p. 89, doi. 10.1002/aur.173
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- Publication type:
- Article
Association between Downstream Taste Signaling Genes, Oral Microbiome, and Severe Early Childhood Caries.
- Published in:
- International Journal of Molecular Sciences, 2023, v. 24, n. 1, p. 81, doi. 10.3390/ijms24010081
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- Publication type:
- Article
Transcriptomic analysis of dystrophin RNAi knockdown reveals a central role for dystrophin in muscle differentiation and contractileapparatus organization.
- Published in:
- BMC Genomics, 2010, v. 11, p. 345, doi. 10.1186/1471-2164-11-345
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- Publication type:
- Article
Gene network modular-based classification of microarray samples.
- Published in:
- BMC Bioinformatics, 2012, v. 13, n. Suppl 10, p. 1, doi. 10.1186/1471-2105-13-S10-S17
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- Publication type:
- Article
Predicting protein functions by relaxation labelling protein interaction network.
- Published in:
- BMC Bioinformatics, 2010, v. 11, p. 1, doi. 10.1186/1471-2105-11-S1-S64
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- Publication type:
- Article
A machine learning model trained on a high-throughput antibacterial screen increases the hit rate of drug discovery.
- Published in:
- PLoS Computational Biology, 2022, v. 18, n. 10, p. 1, doi. 10.1371/journal.pcbi.1010613
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- Publication type:
- Article
Statistical Methods for Meta-Analysis of Microarray Data: A Comparative Study.
- Published in:
- Information Systems Frontiers, 2006, v. 8, n. 1, p. 9, doi. 10.1007/s10796-005-6099-z
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- Publication type:
- Article
Neuregulin 1-alpha regulates phosphorylation, acetylation, and alternative splicing in lymphoblastoid cells<sup>1</sup>.
- Published in:
- Genome, 2013, v. 56, n. 10, p. 619, doi. 10.1139/gen-2013-0068
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- Publication type:
- Article
Brain-expressed exons under purifying selection are enriched for de novo mutations in autism spectrum disorder.
- Published in:
- Nature Genetics, 2014, v. 46, n. 7, p. 742, doi. 10.1038/ng.2980
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- Publication type:
- Article
Conditional generative adversarial network driven radiomic prediction of mutation status based on magnetic resonance imaging of breast cancer.
- Published in:
- Journal of Translational Medicine, 2024, v. 22, n. 1, p. 1, doi. 10.1186/s12967-024-05018-9
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- Publication type:
- Article
ST-CellSeg: Cell segmentation for imaging-based spatial transcriptomics using multi-scale manifold learning.
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- PLoS Computational Biology, 2024, v. 20, n. 6, p. 1, doi. 10.1371/journal.pcbi.1012254
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- Publication type:
- Article
MicroRNA regulatory networks associated with abnormal muscle repair in survivors of critical illness.
- Published in:
- Journal of Cachexia, Sarcopenia & Muscle, 2022, v. 13, n. 2, p. 1262, doi. 10.1002/jcsm.12903
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- Publication type:
- Article
Epigenome-wide DNA methylation profiling of periprostatic adipose tissue in prostate cancer patients with excess adiposity—a pilot study.
- Published in:
- Clinical Epigenetics, 2018, v. 10, n. 1, p. N.PAG, doi. 10.1186/s13148-018-0490-3
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- Publication type:
- Article
Integrative analysis of multiple gene expression profiles with quality-adjusted effect size models.
- Published in:
- BMC Bioinformatics, 2005, v. 6, p. 128, doi. 10.1186/1471-2105-6-128
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- Publication type:
- Article
iNGNN-DTI: prediction of drug–target interaction with interpretable nested graph neural network and pretrained molecule models.
- Published in:
- Bioinformatics, 2024, v. 40, n. 3, p. 1, doi. 10.1093/bioinformatics/btae135
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- Publication type:
- Article
Tightly integrated multiomics-based deep tensor survival model for time-to-event prediction.
- Published in:
- Bioinformatics, 2022, v. 38, n. 12, p. 3259, doi. 10.1093/bioinformatics/btac286
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- Publication type:
- Article
DTF: Deep Tensor Factorization for predicting anticancer drug synergy.
- Published in:
- Bioinformatics, 2020, v. 36, n. 16, p. 4483, doi. 10.1093/bioinformatics/btaa287
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- Publication type:
- Article
Association Between a Multi-Locus Genetic Risk Score and Inflammatory Bowel Disease.
- Published in:
- Bioinformatics & Biology Insights, 2013, n. 7, p. 143, doi. 10.4137/BBI.S11601
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- Publication type:
- Article
Data Integration in Genetics and Genomics: Methods and Challenges.
- Published in:
- Human Genomics & Proteomics, 2009, v. 2009, p. 1, doi. 10.4061/2009/869093
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- Publication type:
- Article
Microarray Meta-Analysis Identifies Acute Lung Injury Biomarkers in Donor Lungs That Predict Development of Primary Graft Failure in Recipients.
- Published in:
- PLoS ONE, 2012, v. 7, n. 10, p. 1, doi. 10.1371/journal.pone.0045506
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- Publication type:
- Article
Gene Expression Changes Associated with Resistance to Intravenous Corticosteroid Therapy in Children with Severe Ulcerative Colitis.
- Published in:
- PLoS ONE, 2010, v. 5, n. 9, p. 1, doi. 10.1371/journal.pone.0013085
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- Publication type:
- Article
Global Functional Atlas of Escherichia coli Encompassing Previously Uncharacterized Proteins.
- Published in:
- PLoS Biology, 2009, v. 7, n. 4, p. 0929, doi. 10.1371/journal.pbio.1000096
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- Publication type:
- Article
MicroRNA-144 is a circulating effector of remote ischemic preconditioning.
- Published in:
- Basic Research in Cardiology, 2014, v. 109, n. 5, p. 1, doi. 10.1007/s00395-014-0423-z
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- Publication type:
- Article
A self-knowledge distillation-driven CNN-LSTM model for predicting disease outcomes using longitudinal microbiome data.
- Published in:
- Bioinformatics Advances, 2023, v. 3, n. 1, p. 1, doi. 10.1093/bioadv/vbad059
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- Publication type:
- Article
Computational prediction of cancer-gene function.
- Published in:
- Nature Reviews Cancer, 2007, v. 7, n. 1, p. 23, doi. 10.1038/nrc2036
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- Publication type:
- Article
A pathogenic deletion in Forkhead Box L1 (FOXL1) identifies the first otosclerosis (OTSC) gene.
- Published in:
- Human Genetics, 2022, v. 141, n. 3/4, p. 965, doi. 10.1007/s00439-021-02381-1
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- Publication type:
- Article
Transcriptomic analysis reveals abnormal muscle repair and remodeling in survivors of critical illness with sustained weakness.
- Published in:
- Scientific Reports, 2016, p. 29334, doi. 10.1038/srep29334
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- Publication type:
- Article
Computational Drug Repurposing for Alzheimer's Disease Using Risk Genes From GWAS and Single-Cell RNA Sequencing Studies.
- Published in:
- Frontiers in Pharmacology, 2021, v. 12, p. 1, doi. 10.3389/fphar.2021.617537
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- Publication type:
- Article
Characterization of Supragingival Plaque and Oral Swab Microbiomes in Children With Severe Early Childhood Caries.
- Published in:
- Frontiers in Microbiology, 2021, v. 12, p. 1, doi. 10.3389/fmicb.2021.683685
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- Publication type:
- Article
Computational Prediction of the Pathogenic Status of Cancer-Specific Somatic Variants.
- Published in:
- Frontiers in Genetics, 2022, v. 12, p. 1, doi. 10.3389/fgene.2021.805656
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- Publication type:
- Article
Discovery of inflammatory bowel disease-associated miRNAs using a novel bipartite clustering approach.
- Published in:
- BMC Medical Genomics, 2020, v. 13, p. 1, doi. 10.1186/s12920-020-0660-y
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- Publication type:
- Article
An empirical test of the competing destinations model.
- Published in:
- Journal of Geographical Systems, 2002, v. 4, n. 3, p. 301, doi. 10.1007/s101090200088
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- Publication type:
- Article
DJ-1/PARK7 Impairs Bacterial Clearance in Sepsis.
- Published in:
- 2017
- By:
- Publication type:
- journal article
A machine learning-based clinical tool for diagnosing myopathy using multi-cohort microarray expression profiles.
- Published in:
- 2020
- By:
- Publication type:
- journal article
An integrative network-based approach to identify novel disease genes and pathways: a case study in the context of inflammatory bowel disease.
- Published in:
- BMC Bioinformatics, 2018, v. 19, n. 1, p. 1, doi. 10.1186/s12859-018-2251-x
- By:
- Publication type:
- Article
Incidence, Characteristics, and Outcomes of Interval Breast Cancers Compared With Screening-Detected Breast Cancers.
- Published in:
- JAMA Network Open, 2020, v. 3, n. 9, p. e2018179, doi. 10.1001/jamanetworkopen.2020.18179
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- Publication type:
- Article
Clustering on longitudinal quality‐of‐life measurements using growth mixture models for clinical prognosis: Implementation on CCTG/AGITG CO.20 trial.
- Published in:
- Cancer Medicine, 2023, v. 12, n. 5, p. 6117, doi. 10.1002/cam4.5341
- By:
- Publication type:
- Article
The genetic diversity of Epstein-Barr virus in the setting of transplantation relative to non-transplant settings: A feasibility study.
- Published in:
- Pediatric Transplantation, 2016, v. 20, n. 1, p. 124, doi. 10.1111/petr.12610
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- Publication type:
- Article
Gene expression using microarrays in transplant recipients at risk of EBV lymphoproliferation after organ transplantation: Preliminary proof-of-concept.
- Published in:
- Pediatric Transplantation, 2009, v. 13, n. 8, p. 990, doi. 10.1111/j.1399-3046.2009.01193.x
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- Publication type:
- Article
Identification of significantly mutated subnetworks in the breast cancer genome.
- Published in:
- Scientific Reports, 2021, v. 11, n. 1, p. 1, doi. 10.1038/s41598-020-80204-5
- By:
- Publication type:
- Article
Modeling Gene-Environment Interaction for the Risk of Non-hodgkin Lymphoma.
- Published in:
- Frontiers in Oncology, 2019, p. N.PAG, doi. 10.3389/fonc.2018.00657
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- Publication type:
- Article
SNVer: a statistical tool for variant calling in analysis of pooled or individual next-generation sequencing data.
- Published in:
- Nucleic Acids Research, 2011, v. 39, n. 19, p. e132, doi. 10.1093/nar/gkr599
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- Publication type:
- Article
ABT-MPNN: an atom-bond transformer-based message-passing neural network for molecular property prediction.
- Published in:
- Journal of Cheminformatics, 2023, v. 15, n. 1, p. 1, doi. 10.1186/s13321-023-00698-9
- By:
- Publication type:
- Article
Deep learning-driven prediction of drug mechanism of action from large-scale chemical-genetic interaction profiles.
- Published in:
- Journal of Cheminformatics, 2022, v. 14, n. 1, p. 1, doi. 10.1186/s13321-022-00596-6
- By:
- Publication type:
- Article
Obesity and prostate cancer: gene expression signature of human periprostatic adipose tissue.
- Published in:
- BMC Medicine, 2012, v. 10, n. 1, p. 108, doi. 10.1186/1741-7015-10-108
- By:
- Publication type:
- Article