Works matching AU Phelan, Jody E.

Results: 45

Understanding molecular consequences of putative drug resistant mutations in Mycobacterium tuberculosis.

Published in:

Scientific Reports, 2018, v. 8, n. 1, p. 1, doi. 10.1038/s41598-018-33370-6

By:

Portelli, Stephanie;
Phelan, Jody E.;
Ascher, David B.;
Clark, Taane G.;
Furnham, Nicholas

Publication type:

Article

Newly Identified Mycobacterium africanum Lineage 10, Central Africa.

Published in:

Emerging Infectious Diseases, 2024, v. 30, n. 3, p. 560, doi. 10.3201/eid3003.231466

By:

Guyeux, Christophe;
Senelle, Gaetan;
Le Meur, Adrien;
Supply, Philip;
Gaudin, Cyril;
Phelan, Jody E.;
Clark, Taane G.;
Rigouts, Leen;
de Jong, Bouke;
Sola, Christophe;
Refrégier, Guislaine

Publication type:

Article

Clusters of Drug-Resistant Mycobacterium tuberculosis Detected by Whole-Genome Sequence Analysis of Nationwide Sample, Thailand, 2014-2017.

Published in:

2021

By:

Nonghanphithak, Ditthawat;
Chaiprasert, Angkana;
Smithtikarn, Saijai;
Kamolwat, Phalin;
Pungrassami, Petchawan;
Chongsuvivatwong, Virasakdi;
Mahasirimongkol, Surakameth;
Reechaipichitkul, Wipa;
Leepiyasakulchai, Chaniya;
Phelan, Jody E.;
Blair, David;
Clark, Taane G.;
Faksri, Kiatichai

Publication type:

journal article

Flavivirus integrations in Aedes aegypti are limited and highly conserved across samples from different geographic regions unlike integrations in Aedes albopictus.

Published in:

Parasites & Vectors, 2021, v. 14, n. 1, p. 1, doi. 10.1186/s13071-021-04828-w

By:

Spadar, Anton;
Phelan, Jody E.;
Benavente, Ernest Diez;
Campos, Monica;
Gomez, Lara Ferrero;
Mohareb, Fady;
Clark, Taane G.;
Campino, Susana

Publication type:

Article

Flavivirus integrations in Aedes aegypti are limited and highly conserved across samples from different geographic regions unlike integrations in Aedes albopictus.

Published in:

Parasites & Vectors, 2021, v. 14, n. 1, p. 1, doi. 10.1186/s13071-021-04828-w

By:

Spadar, Anton;
Phelan, Jody E.;
Benavente, Ernest Diez;
Campos, Monica;
Gomez, Lara Ferrero;
Mohareb, Fady;
Clark, Taane G.;
Campino, Susana

Publication type:

Article

Author Correction: Characterization of rifampicin-resistant Mycobacterium tuberculosis in Khyber Pakhtunkhwa, Pakistan.

Published in:

2021

By:

Khan, Anwar Sheed;
Phelan, Jody E.;
Khan, Muhammad Tahir;
Ali, Sajid;
Qasim, Muhammad;
Napier, Gary;
Campino, Susana;
Ahmad, Sajjad;
Cabral-Marques, Otavio;
Zhang, Shulin;
Rahman, Hazir;
Wei, Dong-Qing;
Clark, Taane G.;
Khan, Taj Ali

Publication type:

Correction Notice

Characterization of rifampicin-resistant Mycobacterium tuberculosis in Khyber Pakhtunkhwa, Pakistan.

Published in:

Scientific Reports, 2021, v. 11, n. 1, p. 1, doi. 10.1038/s41598-021-93501-4

By:

Khan, Anwar Sheed;
Phelan, Jody E.;
Khan, Muhammad Tahir;
Ali, Sajid;
Qasim, Muhammad;
Napier, Gary;
Campino, Susana;
Ahmad, Sajjad;
Cabral-Marques, Otavio;
Zhang, Shulin;
Rahman, Hazir;
Wei, Dong-Qing;
Clark, Taane G.;
Khan, Taj Ali

Publication type:

Article

Characterization of rifampicin-resistant Mycobacterium tuberculosis in Khyber Pakhtunkhwa, Pakistan.

Published in:

Scientific Reports, 2021, v. 11, n. 1, p. 1, doi. 10.1038/s41598-021-93501-4

By:

Khan, Anwar Sheed;
Phelan, Jody E.;
Khan, Muhammad Tahir;
Ali, Sajid;
Qasim, Muhammad;
Napier, Gary;
Campino, Susana;
Ahmad, Sajjad;
Cabral, Otavio Marques;
Zhang, Shulin;
Rahman, Hazir;
Wei, Dong-Qing;
Clark, Taane G.;
Khan, Taj Ali

Publication type:

Article

Whole genome sequencing of Mycobacterium tuberculosis isolates and clinical outcomes of patients treated for multidrug-resistant tuberculosis in Tanzania.

Published in:

BMC Genomics, 2020, v. 21, n. 1, p. 1, doi. 10.1186/s12864-020-6577-1

By:

Katale, Bugwesa Z.;
Mbelele, Peter M.;
Lema, Nsiande A.;
Campino, Susana;
Mshana, Stephen E.;
Rweyemamu, Mark M.;
Phelan, Jody E.;
Keyyu, Julius D.;
Majigo, Mtebe;
Mbugi, Erasto V.;
Dockrell, Hazel M.;
Clark, Taane G.;
Matee, Mecky I.;
Mpagama, Stellah

Publication type:

Article

Multi-platform whole genome sequencing for tuberculosis clinical and surveillance applications.

Published in:

Scientific Reports, 2024, v. 14, n. 1, p. 1, doi. 10.1038/s41598-024-55865-1

By:

Thorpe, Joseph;
Sawaengdee, Waritta;
Ward, Daniel;
Campos, Monica;
Wichukchinda, Nuanjun;
Chaiyasirinroje, Boonchai;
Thanraka, Aungkana;
Chumpol, Jaluporn;
Phelan, Jody E.;
Campino, Susana;
Mahasirimongkol, Surakameth;
Clark, Taane G.

Publication type:

Article

Detection of insecticide resistance markers in Anopheles funestus from the Democratic Republic of the Congo using a targeted amplicon sequencing panel.

Published in:

Scientific Reports, 2023, v. 13, n. 1, p. 1, doi. 10.1038/s41598-023-44457-0

By:

Acford-Palmer, Holly;
Campos, Monica;
Bandibabone, Janvier;
N'Do, Sévérin;
Bantuzeko, Chimanuka;
Zawadi, Bertin;
Walker, Thomas;
Phelan, Jody E.;
Messenger, Louisa A.;
Clark, Taane G.;
Campino, Susana

Publication type:

Article

High throughput human genotyping for variants associated with malarial disease outcomes using custom targeted amplicon sequencing.

Published in:

Scientific Reports, 2023, v. 13, n. 1, p. 1, doi. 10.1038/s41598-023-39233-z

By:

Osborne, Ashley;
Phelan, Jody E.;
Vanheer, Leen N.;
Manjurano, Alphaxard;
Gitaka, Jesse;
Drakeley, Christopher J.;
Kaneko, Akira;
Kita, Kiyoshi;
Campino, Susana;
Clark, Taane G.

Publication type:

Article

Drug resistance profiling of asymptomatic and low-density Plasmodium falciparum malaria infections on Ngodhe island, Kenya, using custom dual-indexing next-generation sequencing.

Published in:

Scientific Reports, 2023, v. 13, n. 1, p. 1, doi. 10.1038/s41598-023-38481-3

By:

Osborne, Ashley;
Phelan, Jody E.;
Kaneko, Akira;
Kagaya, Wataru;
Chan, Chim;
Ngara, Mtakai;
Kongere, James;
Kita, Kiyoshi;
Gitaka, Jesse;
Campino, Susana;
Clark, Taane G.

Publication type:

Article

An integrated in silico immuno-genetic analytical platform provides insights into COVID-19 serological and vaccine targets.

Published in:

Genome Medicine, 2021, v. 13, n. 1, p. 1, doi. 10.1186/s13073-020-00822-6

By:

Ward, Daniel;
Higgins, Matthew;
Phelan, Jody E.;
Hibberd, Martin L.;
Campino, Susana;
Clark, Taane G.

Publication type:

Article

Integrating informatics tools and portable sequencing technology for rapid detection of resistance to anti-tuberculous drugs.

Published in:

Genome Medicine, 2019, v. 11, n. 1, p. N.PAG, doi. 10.1186/s13073-019-0650-x

By:

Phelan, Jody E.;
O'Sullivan, Denise M.;
Machado, Diana;
Ramos, Jorge;
Oppong, Yaa E. A.;
Campino, Susana;
O'Grady, Justin;
McNerney, Ruth;
Hibberd, Martin L.;
Viveiros, Miguel;
Huggett, Jim F.;
Clark, Taane G.

Publication type:

Article

Emergence of KPC-3- and OXA-181-producing ST13 and ST17 Klebsiella pneumoniae in Portugal: genomic insights on national and international dissemination.

Published in:

Journal of Antimicrobial Chemotherapy (JAC), 2023, v. 78, n. 5, p. 1300, doi. 10.1093/jac/dkad093

By:

Elias, Rita;
Spadar, Anton;
Hendrickx, Antoni P A;
Bonnin, Remy A;
Dortet, Laurent;
Pinto, Margarida;
Phelan, Jody E;
Portugal, Isabel;
Campino, Susana;
Silva, Gabriela Jorge da;
Clark, Taane G;
Duarte, Aida;
Perdigão, João

Publication type:

Article

TB-ML—a framework for comparing machine learning approaches to predict drug resistance of Mycobacterium tuberculosis.

Published in:

Bioinformatics Advances, 2023, v. 3, n. 1, p. 1, doi. 10.1093/bioadv/vbad040

By:

Libiseller-Egger, Julian;
Wang, Linfeng;
Deelder, Wouter;
Campino, Susana;
Clark, Taane G;
Phelan, Jody E

Publication type:

Article

Portable sequencing of Mycobacterium tuberculosis for clinical and epidemiological applications.

Published in:

Briefings in Bioinformatics, 2022, v. 23, n. 5, p. 1, doi. 10.1093/bib/bbac256

By:

Gómez-González, Paula J;
Campino, Susana;
Phelan, Jody E;
Clark, Taane G

Publication type:

Article

A next generation targeted amplicon sequencing method to screen for insecticide resistance mutations in Aedes aegypti populations reveals a rdl mutation in mosquitoes from Cabo Verde.

Published in:

PLoS Neglected Tropical Diseases, 2022, v. 16, n. 12, p. 1, doi. 10.1371/journal.pntd.0010935

By:

Collins, Emma L.;
Phelan, Jody E.;
Hubner, Magdalena;
Spadar, Anton;
Campos, Monica;
Ward, Daniel;
Acford-Palmer, Holly;
Gomes, Ana Rita;
Silva, Keily;
Ferrero Gomez, Lara;
Clark, Taane G.;
Campino, Susana

Publication type:

Article

Recombination in pe/ppe genes contributes to genetic variation in Mycobacterium tuberculosis lineages.

Published in:

BMC Genomics, 2016, v. 17, p. 1, doi. 10.1186/s12864-016-2467-y

By:

Phelan, Jody E.;
Coll, Francesc;
Bergval, Indra;
Anthony, Richard M.;
Warren, Rob;
Sampson, Samantha L.;
Gey van Pittius, Nicolaas C.;
Glynn, Judith R.;
Crampin, Amelia C.;
Alves, Adriana;
Bessa, Theolis Barbosa;
Campino, Susana;
Dheda, Keertan;
Grandjean, Louis;
Hasan, Rumina;
Hasan, Zahra;
Miranda, Anabela;
Moore, David;
Panaiotov, Stefan;
Perdigao, Joao

Publication type:

Article

Leveraging large-scale Mycobacterium tuberculosis whole genome sequence data to characterise drug-resistant mutations using machine learning and statistical approaches.

Published in:

Scientific Reports, 2024, v. 14, n. 1, p. 1, doi. 10.1038/s41598-024-77947-w

By:

Pruthi, Siddharth Sanjay;
Billows, Nina;
Thorpe, Joseph;
Campino, Susana;
Phelan, Jody E.;
Mohareb, Fady;
Clark, Taane G.

Publication type:

Article

Whole genome sequencing analysis of Mycobacterium tuberculosis reveals circulating strain types and drug-resistance mutations in the Philippines.

Published in:

Scientific Reports, 2024, v. 14, n. 1, p. 1, doi. 10.1038/s41598-024-70471-x

By:

Wang, Linfeng;
Lim, Dodge R.;
Phelan, Jody E.;
Reyes, Lorenzo T.;
Palparan, Alma G.;
Sanchez, Maria Guileane C.;
Asuncion, Louella Abigail A.;
Tujan, Ma. Angelica A.;
Medado, Inez Andrea P.;
Daga, Chona Mae A.;
Llames, Jo-Hannah S.;
Mitarai, Satoshi;
Murase, Yoshiro;
Morishige, Yuta;
Ang, Concepcion F.;
Malabad, John Carlo M.;
Montoya, Jaime C.;
Hafalla, Julius C.;
Campino, Susana;
Hibberd, Martin L.

Publication type:

Article

Genomic analysis of Salmonella enterica from Metropolitan Manila abattoirs and markets reveals insights into circulating virulence and antimicrobial resistance genotypes.

Published in:

Frontiers in Microbiology, 2024, p. 1, doi. 10.3389/fmicb.2023.1304283

By:

Mora, Jonah Feliza B.;
Meclat, Vanessa Yvonne B.;
Calayag, Alyzza Marie B.;
Campino, Susana;
Hafalla, Julius C. R.;
Hibberd, Martin L.;
Phelan, Jody E.;
Clark, Taane G.;
Rivera, Windell L.

Publication type:

Article

Functional genetic variation in pe/ppe genes contributes to diversity in Mycobacterium tuberculosis lineages and potential interactions with the human host.

Published in:

Frontiers in Microbiology, 2023, p. 1, doi. 10.3389/fmicb.2023.1244319

By:

Josefina Gómez-González, Paula;
Grabowska, Anna D.;
Tientcheu, Leopold D.;
Tsolaki, Anthony G.;
Hibberd, Martin L.;
Campino, Susana;
Phelan, Jody E.;
Clark, Taane G.

Publication type:

Article

Genomic and functional portrait of multidrug-resistant, hydrogen sulfide (H<sub>2</sub>S)-producing variants of Escherichia coli.

Published in:

Frontiers in Microbiology, 2023, p. 1, doi. 10.3389/fmicb.2023.1206757

By:

Mazumder, Razib;
Hussain, Arif;
Rahman, Mohammad Mustafizur;
Phelan, Jody E.;
Campino, Susana;
Abdullah, Ahmed;
Clark, Taane G.;
Mondal, Dinesh

Publication type:

Article

Genome dynamics of high-risk resistant and hypervirulent Klebsiella pneumoniae clones in Dhaka, Bangladesh.

Published in:

Frontiers in Microbiology, 2023, p. 1, doi. 10.3389/fmicb.2023.1184196

By:

Hussain, Arif;
Mazumder, Razib;
Ahmed, Abdullah;
Saima, Umme;
Phelan, Jody E.;
Campino, Susana;
Ahmed, Dilruba;
Asadulghani, Md;
Clark, Taane G.;
Mondal, Dinesh

Publication type:

Article

Genome sequencing of Plasmodium malariae identifies continental segregation and mutations associated with reduced pyrimethamine susceptibility.

Published in:

Nature Communications, 2024, v. 15, n. 1, p. 1, doi. 10.1038/s41467-024-55102-3

By:

Ibrahim, Amy;
Mohring, Franziska;
Manko, Emilia;
van Schalkwyk, Donelly A.;
Phelan, Jody E.;
Nolder, Debbie;
Borrmann, Steffen;
Adegnika, Ayola A.;
Di Santi, Silvia Maria;
Alam, Mohammad Shafiul;
Mondal, Dinesh;
Nosten, Francois;
Sutherland, Colin J.;
Moon, Robert W.;
Clark, Taane G.;
Campino, Susana

Publication type:

Article

Genomic analysis of global Plasmodium vivax populations reveals insights into the evolution of drug resistance.

Published in:

Nature Communications, 2024, v. 15, n. 1, p. 1, doi. 10.1038/s41467-024-54964-x

By:

Ngwana-Joseph, Gabrielle C.;
Phelan, Jody E.;
Manko, Emilia;
Dombrowski, Jamille G.;
da Silva Santos, Simone;
Suarez-Mutis, Martha;
Vélez-Tobón, Gabriel;
Tobón Castaño, Alberto;
Machado, Ricardo Luiz Dantas;
Marinho, Claudio R. F.;
Nolder, Debbie;
Nosten, François;
Sutherland, Colin J.;
Campino, Susana;
Clark, Taane G.

Publication type:

Article

Molecular characterisation of second-line drug resistance among drug resistant tuberculosis patients tested in Uganda: a two and a half-year's review.

Published in:

2022

By:

Mujuni, Dennis;
Kasemire, Dianah Linda;
Ibanda, Ivan;
Kabugo, Joel;
Nsawotebba, Andrew;
Phelan, Jody E.;
Majwala, Robert Kaos;
Tugumisirize, Didas;
Nyombi, Abdunoor;
Orena, Beatrice;
Turyahabwe, Irene;
Byabajungu, Henry;
Nadunga, Diana;
Musisi, Kenneth;
Joloba, Moses Lutakoome;
Ssengooba, Willy

Publication type:

journal article

Recruitment of multi-segment genomic RNAs by Bluetongue virus requires a preformed RNA network.

Published in:

Nucleic Acids Research, 2024, v. 52, n. 14, p. 8500, doi. 10.1093/nar/gkae404

By:

Sung, Po-yu;
Phelan, Jody E;
Luo, Dongsheng;
Kulasegaran-Shylini, Raghavendran;
Bohn, Patrick;
Smyth, Redmond P;
Roy, Polly

Publication type:

Article

Rapid profiling of Plasmodium parasites from genome sequences to assist malaria control.

Published in:

Genome Medicine, 2023, v. 15, n. 1, p. 1, doi. 10.1186/s13073-023-01247-7

By:

Phelan, Jody E.;
Turkiewicz, Anna;
Manko, Emilia;
Thorpe, Joseph;
Vanheer, Leen N.;
van de Vegte-Bolmer, Marga;
Ngoc, Nguyen Thi Hong;
Binh, Nguyen Thi Huong;
Thieu, Nguyen Quang;
Gitaka, Jesse;
Nolder, Debbie;
Beshir, Khalid B.;
Dombrowski, Jamille G.;
Di Santi, Silvia Maria;
Bousema, Teun;
Sutherland, Colin J.;
Campino, Susana;
Clark, Taane G.

Publication type:

Article

TGV: suite of tools to visualize transmission graphs.

Published in:

NAR Genomics & Bioinformatics, 2024, v. 6, n. 4, p. 1, doi. 10.1093/nargab/lqae158

By:

Phelan, Jody E;
Niazi, Fatima;
Wang, Linfeng;
Ngwana-Joseph, Gabrielle C;
Sobkowiak, Benjamin;
Cohen, Ted;
Campino, Susana;
Clark, Taane G

Publication type:

Article

Using genomics to understand the origin and dispersion of multidrug and extensively drug resistant tuberculosis in Portugal.

Published in:

Scientific Reports, 2020, v. 10, n. 1, p. 1, doi. 10.1038/s41598-020-59558-3

By:

Perdigão, João;
Gomes, Pedro;
Miranda, Anabela;
Maltez, Fernando;
Machado, Diana;
Silva, Carla;
Phelan, Jody E.;
Brum, Laura;
Campino, Susana;
Couto, Isabel;
Viveiros, Miguel;
Clark, Taane G.;
Portugal, Isabel

Publication type:

Article

Whole genome sequencing of drug resistant Mycobacterium tuberculosis isolates from a high burden tuberculosis region of North West Pakistan.

Published in:

Scientific Reports, 2019, v. 9, n. 1, p. N.PAG, doi. 10.1038/s41598-019-51562-6

By:

Jabbar, Abdul;
Phelan, Jody E.;
de Sessions, Paola Florez;
Khan, Taj Ali;
Rahman, Hazir;
Khan, Sadiq Noor;
Cantillon, Daire M.;
Wildner, Leticia Muraro;
Ali, Sajid;
Campino, Susana;
Waddell, Simon J.;
Clark, Taane G.

Publication type:

Article

Mycobacterium tuberculosis whole genome sequencing provides insights into the Manila strain and drug-resistance mutations in the Philippines.

Published in:

Scientific Reports, 2019, v. 9, n. 1, p. N.PAG, doi. 10.1038/s41598-019-45566-5

By:

Phelan, Jody E.;
Lim, Dodge R.;
Mitarai, Satoshi;
de Sessions, Paola Florez;
Tujan, Ma. Angelica A.;
Reyes, Lorenzo T.;
Medado, Inez Andrea P.;
Palparan, Alma G.;
Naim, Ahmad Nazri Mohamed;
Jie, Song;
Segubre-Mercado, Edelwisa;
Simoes, Beatriz;
Campino, Susana;
Hafalla, Julius C.;
Murase, Yoshiro;
Morishige, Yuta;
Hibberd, Martin L.;
Kato, Seiya;
Ama, Ma. Cecilia G.;
Clark, Taane G.

Publication type:

Article

An integrated whole genome analysis of Mycobacterium tuberculosis reveals insights into relationship between its genome, transcriptome and methylome.

Published in:

Scientific Reports, 2019, v. 9, n. 1, p. N.PAG, doi. 10.1038/s41598-019-41692-2

By:

Gomez-Gonzalez, Paula J.;
Andreu, Nuria;
Phelan, Jody E.;
de Sessions, Paola Florez;
Glynn, Judith R.;
Crampin, Amelia C.;
Campino, Susana;
Butcher, Philip D.;
Hibberd, Martin L.;
Clark, Taane G.

Publication type:

Article

Large-scale reference-free analysis of flavivirus sequences in Aedes aegypti whole genome DNA sequencing data.

Published in:

Parasites & Vectors, 2023, v. 16, n. 1, p. 1, doi. 10.1186/s13071-023-05898-8

By:

Spadar, Anton;
Phelan, Jody E.;
Clark, Taane G.;
Campino, Susana

Publication type:

Article

Feature weighted models to address lineage dependency in drug-resistance prediction from Mycobacterium tuberculosis genome sequences.

Published in:

Bioinformatics, 2023, v. 39, n. 7, p. 1, doi. 10.1093/bioinformatics/btad428

By:

Billows, Nina;
Phelan, Jody E;
Xia, Dong;
Peng, Yonghong;
Clark, Taane G;
Chang, Yu-Mei

Publication type:

Article

Genomic evidence supporting the clonal expansion of extensively drug-resistant tuberculosis bacteria belonging to a rare proto-Beijing genotype.

Published in:

Emerging Microbes & Infections, 2020, v. 9, n. 1, p. 2632, doi. 10.1080/22221751.2020.1852891

By:

Srilohasin, Prapaporn;
Prammananan, Therdsak;
Faksri, Kiatichai;
Phelan, Jody E.;
Suriyaphol, Prapat;
Kamolwat, Phalin;
Smithtikarn, Saijai;
Disratthakit, Areeya;
Regmi, Sanjib Mani;
Leechawengwongs, Manoon;
Twee-Hee Ong, Rick;
Teo, Yik Ying;
Tongsima, Sissades;
Clark, Taane G.;
Chaiprasert, Angkana

Publication type:

Article

Genomic evidence supporting the clonal expansion of extensively drugresistant tuberculosis bacteria belonging to a rare proto-Beijing genotype.

Published in:

Emerging Microbes & Infections, 2020, v. 9, n. 1, p. 2632, doi. 10.1080/22221751.2020.1852891

By:

Srilohasin, Prapaporn;
Prammananan, Therdsak;
Faksri, Kiatichai;
Phelan, Jody E.;
Suriyaphol, Prapat;
Kamolwat, Phalin;
Smithtikarn, Saijai;
Disratthakit, Areeya;
Regmi, Sanjib Mani;
Leechawengwongs, Manoon;
Rick Twee-Hee Ong;
Yik Ying Teo;
Tongsima, Sissades;
Clark, Taane G.;
Chaiprasert, Angkana

Publication type:

Article

Identification of two insecticide resistance markers in Ethiopian Anopheles stephensi mosquitoes using a multiplex amplicon sequencing assay.

Published in:

Scientific Reports, 2023, v. 13, n. 1, p. 1, doi. 10.1038/s41598-023-32336-7

By:

Acford-Palmer, Holly;
Phelan, Jody E.;
Tadesse, Fitsum G.;
Kristan, Mojca;
Collins, Emma;
Spadar, Anton;
Walker, Thomas;
Bousema, Teun;
Messenger, Louisa A.;
Clark, Taane G.;
Campino, Susana

Publication type:

Article

Large-scale genomic analysis of Mycobacterium tuberculosis reveals extent of target and compensatory mutations linked to multi-drug resistant tuberculosis.

Published in:

Scientific Reports, 2023, v. 13, n. 1, p. 1, doi. 10.1038/s41598-023-27516-4

By:

Napier, Gary;
Campino, Susana;
Phelan, Jody E.;
Clark, Taane G.

Publication type:

Article

Deep learning-derived cardiovascular age shares a genetic basis with other cardiac phenotypes.

Published in:

Scientific Reports, 2022, v. 12, n. 1, p. 1, doi. 10.1038/s41598-022-27254-z

By:

Libiseller-Egger, Julian;
Phelan, Jody E.;
Attia, Zachi I.;
Benavente, Ernest Diez;
Campino, Susana;
Friedman, Paul A.;
Lopez-Jimenez, Francisco;
Leon, David A.;
Clark, Taane G.

Publication type:

Article

Geographical classification of malaria parasites through applying machine learning to whole genome sequence data.

Published in:

Scientific Reports, 2022, v. 12, n. 1, p. 1, doi. 10.1038/s41598-022-25568-6

By:

Deelder, Wouter;
Manko, Emilia;
Phelan, Jody E.;
Campino, Susana;
Palla, Luigi;
Clark, Taane G.

Publication type:

Article

Identifying mixed Mycobacterium tuberculosis infections from whole genome sequence data.

Published in:

BMC Genomics, 2018, v. 19, n. 1, p. 1, doi. 10.1186/s12864-018-4988-z

By:

Sobkowiak, Benjamin;
Glynn, Judith R.;
Houben, Rein M. G. J.;
Mallard, Kim;
Phelan, Jody E.;
Guerra-Assunção, José Afonso;
Banda, Louis;
Mzembe, Themba;
Viveiros, Miguel;
McNerney, Ruth;
Parkhill, Julian;
Crampin, Amelia C.;
Clark, Taane G.

Publication type:

Article