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Crystal Structure of Inhibitor-Bound Bacterial Oligopeptidase B in the Closed State: Similarity and Difference between Protozoan and Bacterial Enzymes.
Published in:
International Journal of Molecular Sciences, 2023, v. 24, n. 3, p. 2286, doi. 10.3390/ijms24032286
By:
- Petrenko, Dmitry E.;
- Karlinsky, David M.;
- Gordeeva, Veronika D.;
- Arapidi, Georgij P.;
- Britikova, Elena V.;
- Britikov, Vladimir V.;
- Nikolaeva, Alena Y.;
- Boyko, Konstantin M.;
- Timofeev, Vladimir I.;
- Kuranova, Inna P.;
- Mikhailova, Anna G.;
- Bocharov, Eduard V.;
- Rakitina, Tatiana V.
Publication type:
Article
The mRubyFT Protein, Genetically Encoded Blue-to-Red Fluorescent Timer.
Published in:
International Journal of Molecular Sciences, 2022, v. 23, n. 6, p. 3208, doi. 10.3390/ijms23063208
By:
- Subach, Oksana M.;
- Tashkeev, Aleksandr;
- Vlaskina, Anna V.;
- Petrenko, Dmitry E.;
- Gaivoronskii, Filipp A.;
- Nikolaeva, Alena Y.;
- Ivashkina, Olga I.;
- Anokhin, Konstantin V.;
- Popov, Vladimir O.;
- Boyko, Konstantin M.;
- Subach, Fedor V.
Publication type:
Article
The Nature and Mechanism of Charging of Electron Traps in Lu2SiO5:Ce3+ Crystals.
Published in:
Journal of Experimental & Theoretical Physics, 2004, v. 99, n. 2, p. 386, doi. 10.1134/1.1800196
By:
- Znamenski&icaron;, N. V.;
- Manykin, E. A.;
- Petrenko, E. A.;
- Yukina, T. G.;
- Malyukin, Yu. V.;
- Zhmurin, P. N.;
- Grinev, B. V.;
- Masa1ov, A. A.;
- Shpak, A. P.
Publication type:
Article
Effect of the Pump Absorption on Generation of Infrared Stimulated Electronic Raman Scattering in Alkali-Metal Vapors.
Published in:
Journal of Experimental & Theoretical Physics, 2002, v. 94, n. 4, p. 685, doi. 10.1134/1.1477893
By:
- Agafonov, A. I.;
- Grigoryan, G. G.;
- Znamenskiy, N. V.;
- Manykin, E. A.;
- Orlov, Yu. V.;
- Petrenko, E. A.;
- Sitnikov, M. G.;
- Malakyan, Yu. P.
Publication type:
Article
The Nature of Activation Centers in Y[sub 2]SiO[sub 5] : Pr[sup 3+],Gd[sub 2]SiO[sub 5] : Pr[sup 3+], and Lu[sub 2]SiO[sub 5] : Pr[sup 3+] Crystals.
Published in:
Journal of Experimental & Theoretical Physics, 2001, v. 93, n. 2, p. 372, doi. 10.1134/1.1402737
By:
- Znamenskiı, N. V.;
- Manykin, É. A.;
- Orlov, Yu. V.;
- Petrenko, E. A.;
- Yukina, T. G.;
- Malyukin, Yu. V.;
- Borisov, R. S.;
- Zhmurin, P. N.;
- Lebedenko, A. N.;
- Grinev, B. V.
Publication type:
Article
Echo spectroscopy of two-level systems in a Y[sub 2]SiO[sub 5]: Pr[sup 3+] crystal.
Published in:
Journal of Experimental & Theoretical Physics, 1999, v. 88, n. 2, p. 385, doi. 10.1134/1.558807
By:
- Borisov, R. S.;
- Grinev, B. V.;
- Malyukin, Yu. V.;
- Minkov, B. I.;
- Znamenskiı, N. V.;
- Manykin, É. A.;
- Marchenko, D. V.;
- Petrenko, E. A.
Publication type:
Article
Analysis of discrete spectra of electrochemical noise of lithium power sources.
Published in:
Journal of Solid State Electrochemistry, 2019, v. 23, n. 2, p. 497, doi. 10.1007/s10008-018-4156-z
By:
- Klyuev, A. L.;
- Grafov, B. M.;
- Davydov, A. D.;
- Lukovtsev, V. P.;
- Petrenko, E. M.
Publication type:
Article
Hydrogen bonding contribution to the water pair interaction potential: Effects on the model liquid structure.
Published in:
Journal of Structural Chemistry, 2004, v. 45, n. 4, p. 643, doi. 10.1007/s10947-005-0039-0
By:
- Borovkov, A. V.;
- Antipova, M. L.;
- Petrenko, V. E.;
- Kessler, Yu. M.
Publication type:
Article
Electric Strength of Dielectrics under Influence of Bipolar Voltage Pulses of Submicrosecond Duration.
Published in:
Technical Physics, 2023, v. 68, p. S221, doi. 10.1134/S1063784223900589
By:
- Vazhov, V. F.;
- Petrenko, E. V.;
- Yudin, A. S.
Publication type:
Article
Quantum-chemical study of the mechanism of dissolution of scleroproteins in N-methylmorpholine N-oxide.
Published in:
Russian Journal of General Chemistry, 2008, v. 78, n. 1, p. 139, doi. 10.1134/S1070363208010246
By:
- Sashina, E. S.;
- Novoselov, N. P.;
- Toroshekova, S. V.;
- Petrenko, V. E.
Publication type:
Article
New model pair potential for water. Effect of inclusion of specific O⋯H interactions on the topology and dynamics of the hydrogen-bond network.
Published in:
Russian Journal of General Chemistry, 2007, v. 77, n. 10, p. 1700, doi. 10.1134/S1070363207100076
By:
- Petrenko, V. E.;
- Antipova, M. L.;
- Borovkov, A. V.;
- Ved', O. V.
Publication type:
Article
Comparative Structural Investigation of Histone-Like HU Proteins by Small-Angle X-ray Scattering.
Published in:
Crystallography Reports, 2023, v. 68, n. 6, p. 912, doi. 10.1134/S1063774523600953
By:
- Petoukhov, M. V.;
- Rakitina, T. V.;
- Agapova, Yu. K.;
- Petrenko, D. E.;
- Konarev, P. V.;
- Britikov, V. V.;
- Britikova, E. V.;
- Bocharov, E. V.;
- Shtykova, E. V.
Publication type:
Article
Developmental changes in the mechanisms of image classification in young schoolchildren with different cognitive styles.
Published in:
Human Physiology, 2005, v. 31, n. 1, p. 10, doi. 10.1007/s10747-005-0002-7
By:
- T. G. Beteleva;
- N. E. Petrenko
Publication type:
Article
Mechanisms of Classification of Visual Objects in Children with Different Styles of Cognitive Activity.
Published in:
Human Physiology, 2004, v. 30, n. 1, p. 31
By:
- T. G. Beteleva;
- N. E. Petrenko
Publication type:
Article
How the Hinge Region Affects Interactions between the Catalytic and β-Propeller Domains in Oligopeptidase B.
Published in:
Crystals (2073-4352), 2023, v. 13, n. 12, p. 1642, doi. 10.3390/cryst13121642
By:
- Timofeev, Vladimir I.;
- Gaponov, Yury A.;
- Petrenko, Dmitry E.;
- Peters, Georgy S.;
- Agapova, Yulia K.;
- Nikolaeva, Alena Y.;
- Mikhailova, Anna G.;
- Rakitina, Tatiana V.
Publication type:
Article
Elucidation of the Conformational Transition of Oligopeptidase B by an Integrative Approach Based on the Combination of X-ray, SAXS, and Essential Dynamics Sampling Simulation.
Published in:
Crystals (2073-4352), 2022, v. 12, n. 5, p. N.PAG, doi. 10.3390/cryst12050712
By:
- Britikov, Vladimir V.;
- Timofeev, Vladimir I.;
- Petrenko, Dmitry E.;
- Britikova, Elena V.;
- Nikolaeva, Alena Y.;
- Vlaskina, Anna V.;
- Boyko, Konstantin M.;
- Mikhailova, Anna G.;
- Rakitina, Tatiana V.
Publication type:
Article
The Crystal Structure of Nα-p-tosyl-lysyl Chloromethylketone-Bound Oligopeptidase B from Serratia Proteamaculans Revealed a New Type of Inhibitor Binding.
Published in:
Crystals (2073-4352), 2021, v. 11, n. 11, p. 1438, doi. 10.3390/cryst11111438
By:
- Timofeev, Vladimir I.;
- Petrenko, Dmitry E.;
- Agapova, Yulia K.;
- Vlaskina, Anna V.;
- Karlinsky, David M.;
- Mikhailova, Anna G.;
- Kuranova, Inna P.;
- Rakitina, Tatiana V.
Publication type:
Article
Computation of the Morse Spectrum.
Published in:
Journal of Mathematical Sciences, 2004, v. 120, n. 2, p. 1155, doi. 10.1023/B:JOTH.0000014844.96239.dc
By:
- Osipenko, G. S.;
- Romanovsky, J. V.;
- Ampilova, N. B.;
- Petrenko, E. I.
Publication type:
Article
Determination of the Pulsed Electron Beam Spectrum by Current and Voltage Oscillograms.
Published in:
Laser & Particle Beams, 2021, p. 1, doi. 10.1155/2021/8815697
By:
- Pushkarev, A.;
- Prima, A.;
- Ezhov, V.;
- Miloichikova, I.;
- Petrenko, E.;
- Shao, T.
Publication type:
Article
Peculiarities of pseudogap in Y0.95Pr0.05Ba2Cu3O7−δ single crystals under pressure up to 1.7 GPa.
Published in:
Scientific Reports, 2019, v. 9, n. 1, p. 1, doi. 10.1038/s41598-019-55959-1
By:
- Solovjov, A. L.;
- Omelchenko, L. V.;
- Petrenko, E. V.;
- Vovk, R. V.;
- Khotkevych, V. V.;
- Chroneos, A.
Publication type:
Article
Effect of annealing on a pseudogap state in untwinned YBa2Cu3O7−δ single crystals.
Published in:
Scientific Reports, 2019, v. 9, n. 1, p. N.PAG, doi. 10.1038/s41598-019-45286-w
By:
- Solovjov, A. L.;
- Petrenko, E. V.;
- Omelchenko, L. V.;
- Vovk, R. V.;
- Goulatis, I. L.;
- Chroneos, A.
Publication type:
Article
Comparative Analysis of the Interfaces between Monomers in the Dimers of Bacterial Histone-Like HU Proteins by the MM-GBSA Method.
Published in:
Crystallography Reports, 2022, v. 67, n. 6, p. 897, doi. 10.1134/S1063774522060025
By:
- Agapova, Yu. K.;
- Petrenko, D. E.;
- Timofeev, V. I.;
- Rakitina, T. V.
Publication type:
Article
Study of the Binding Free Energy of Peptide Substrates in the Active Site of Oligopeptidase B from Serratia proteamaculans by the MM-GBSA Method.
Published in:
Crystallography Reports, 2022, v. 67, n. 3, p. 383, doi. 10.1134/S1063774522030154
By:
- Petrenko, D. E.;
- Timofeev, V. I.;
- Karlinsky, D. M.;
- Plashchinskaia, D. D.;
- Mikhailova, A. G.;
- Rakitina, T. V.
Publication type:
Article
Modeling of the Complex of the N-Methyl–D-Aspartate (NMDA) Receptor with Lipids of the Postsynaptic Membrane.
Published in:
Crystallography Reports, 2021, v. 66, n. 6, p. 1010, doi. 10.1134/S1063774521060183
By:
- Komolov, A. S.;
- Petrenko, D. E.;
- Timofeev, V. I.
Publication type:
Article
Crystallographic Study of Mutants and Complexes of Oligopeptidase B from Serratia proteamaculans.
Published in:
Crystallography Reports, 2020, v. 65, n. 6, p. 909, doi. 10.1134/S1063774520060255
By:
- Petrenko, D. E.;
- Nikolaeva, A. Yu.;
- Lazarenko, V. A.;
- Dorovatovskiy, P. V.;
- Timofeev, V. I.;
- Vlaskina, A. V.;
- Korzhenevskiy, D. A.;
- Mikhailova, A. G.;
- Boyko, K. M.;
- Rakitina, T. V.
Publication type:
Article
Screening of Conditions that Facilitate Crystallization of Oligopeptidase B from Serratia Proteamaculans by Differential Scanning Fluorimetry.
Published in:
Crystallography Reports, 2020, v. 65, n. 2, p. 264, doi. 10.1134/S1063774520020170
By:
- Petrenko, D. E.;
- Nikolaeva, A. Yu.;
- Lazarenko, V. A.;
- Dorovatovskii, P. V.;
- Timofeev, V. I.;
- Vlaskina, A. V.;
- Korzhenevskiy, D. A.;
- Mikhailova, A. G.;
- Rakitina, T. V.
Publication type:
Article
Two mechanisms of 1D2 fluorescence quenching of Pr3+-doped Y2SiO5 crystal.
Published in:
Physica Status Solidi (B), 2003, v. 240, n. 3, p. 655, doi. 10.1002/pssb.200301902
By:
- Yu. V. Malyukin;
- A. A. Masalov;
- P. N. Zhmurin;
- N. V. Znamenskii;
- E. A. Petrenko;
- T. G. Yukina
Publication type:
Article
First Crystal Structure of Bacterial Oligopeptidase B in an Intermediate State: The Roles of the Hinge Region Modification and Spermine.
Published in:
Biology (2079-7737), 2021, v. 10, n. 10, p. 1021, doi. 10.3390/biology10101021
By:
- Petrenko, Dmitry E.;
- Timofeev, Vladimir I.;
- Britikov, Vladimir V.;
- Britikova, Elena V.;
- Kleymenov, Sergey Y.;
- Vlaskina, Anna V.;
- Kuranova, Inna P.;
- Mikhailova, Anna G.;
- Rakitina, Tatiana V.
Publication type:
Article
Dynamics of EEG Rhythm Interaction Preceding the Awakening Moment with Subsequent Restoration of Activity after Brief Falling Asleep Episodes.
Published in:
Journal of Evolutionary Biochemistry & Physiology, 2022, v. 58, n. 2, p. 558, doi. 10.1134/S0022093022020235
By:
- Yakovenko, I. A.;
- Petrenko, N. E.;
- Cheremushkin, E. A.;
- Dorokhov, V. B.
Publication type:
Article
Interhemispheric Asymmetry of Connections of EEG Rhythms on Spontaneous Waking after Transient Episodes of Sleep while Performing a Monotonous Psychomotor Test.
Published in:
Neuroscience & Behavioral Physiology, 2023, v. 53, n. 1, p. 12, doi. 10.1007/s11055-023-01384-x
By:
- Yakovenko, I. A.;
- Petrenko, N. E.;
- Cheremushkin, E. A.;
- Tkachenko, O. N.;
- Dorokhov, V. B.
Publication type:
Article
EEG Characteristics and Anxiety Levels in Subjects with Different Levels of Success in Recovering Psychomotor Activity on Waking During Daytime Sleep.
Published in:
Neuroscience & Behavioral Physiology, 2022, v. 52, n. 4, p. 562, doi. 10.1007/s11055-022-01275-7
By:
- Cheremushkin, E. A.;
- Petrenko, N. E.;
- Dorokhov, V. B.
Publication type:
Article
Sleep and Neurophysiological Correlates of Activation of Consciousness on Awakening.
Published in:
Neuroscience & Behavioral Physiology, 2022, v. 52, n. 2, p. 213, doi. 10.1007/s11055-022-01226-2
By:
- Cheremushkin, E. A.;
- Petrenko, N. E.;
- Dorokhov, V. B.
Publication type:
Article
EEG Characteristics during Short-Term Spontaneous Waking Periods of Different Durations with Changes in Psychomotor Activity Induced by Falling Asleep.
Published in:
Neuroscience & Behavioral Physiology, 2020, v. 50, n. 9, p. 1232, doi. 10.1007/s11055-020-01024-8
By:
- Cheremushkin, E. A.;
- Petrenko, N. E.;
- Gendzhalieva, M. S.;
- Malakhov, D. G.;
- Dorokhov, V. B.
Publication type:
Article
Interaction of EEG Rhythms in a Set to a Facial Expression.
Published in:
Neuroscience & Behavioral Physiology, 2019, v. 49, n. 4, p. 508, doi. 10.1007/s11055-019-00763-7
By:
- Yakovenko, I. A.;
- Petrenko, N. E.;
- Cheremushkin, E. A.;
- Kozlov, M. K.
Publication type:
Article
Synchronization of EEG Theta and Alpha Rhythms in an Unconscious Set to the Perception of an Emotional Facial Expression.
Published in:
Neuroscience & Behavioral Physiology, 2010, v. 40, n. 2, p. 197, doi. 10.1007/s11055-009-9239-y
By:
- Kostandov, É A..;
- Kurova, N. S.;
- Cheremushkin, E. A.;
- Petrenko, N. E.;
- Ashkinazi, M. L.
Publication type:
Article
Relationship between the plasticity of a set to an emotional facial expression and the load on working memory.
Published in:
Neuroscience & Behavioral Physiology, 2009, v. 39, n. 3, p. 223, doi. 10.1007/s11055-009-9126-6
By:
- Kostandov, É. A.;
- Kurova, N. S.;
- Cheremushkin, E. A.;
- Petrenko, N. E.;
- Ashkinazi, M. L.;
- Yakovenko, I. A.
Publication type:
Article
Interhemispheric asymmetry of the EEG rhythms coupling accompanies cognitive awakening during bimanual performance of a psychomotor test.
Published in:
European Physical Journal: Special Topics, 2024, v. 233, n. 3, p. 607, doi. 10.1140/epjs/s11734-023-01060-8
By:
- Yakovenko, Irina A.;
- Petrenko, Nadezhda E.;
- Tkachenko, Olga N.;
- Gandina, Eugenia O.;
- Puchkova, Alexandra N.;
- Dorokhov, Vladimir B.
Publication type:
Article
Neural correlates of the efficiency of psychomotor activity recovery following short sleep episodes.
Published in:
European Physical Journal: Special Topics, 2024, v. 233, n. 3, p. 601, doi. 10.1140/epjs/s11734-023-01062-6
By:
- Cheremushkin, Evgeniy A.;
- Petrenko, Nadezhda E.;
- Kuznetsova, Yulia A.;
- Arseniev, Gleb N.;
- Taranov, Anton O.;
- Puchkova, Alexandra N.;
- Dorokhov, Vladimir B.
Publication type:
Article
Myelin Basic Protein Attenuates Furin-Mediated Bri2 Cleavage and Postpones Its Membrane Trafficking.
Published in:
International Journal of Molecular Sciences, 2024, v. 25, n. 5, p. 2608, doi. 10.3390/ijms25052608
By:
- Smirnova, Evgeniya V.;
- Timofeev, Vladimir I.;
- Rakitina, Tatiana V.;
- Petrenko, Dmitry E.;
- Elmeeva, Olga S.;
- Saratov, George A.;
- Kudriaeva, Anna A.;
- Bocharov, Eduard V.;
- Belogurov Jr., Alexey A.
Publication type:
Article
Neurophysiological markers of high anxiety level in man during the process of preparing for a visual recognition.
Published in:
Journal of Integrative Neuroscience, 2018, v. 17, n. 3/4, p. 377, doi. 10.3233/JIN-170074
By:
- Cheremushkin, Evgeniy A.;
- Petrenko, Nadezda E.;
- Yakovenko, Irina A.;
- Gordeev, Sergei A.;
- Alipov, Nikolay N.;
- Sergeeva, Olga V.
Publication type:
Article
CHARGE ACCUMULATION ON METAL STRIP-DETECTOR SENSORS UNDER ION BEAM IRRADIATION: EXPERIMENT AND MODELING.
Published in:
Nuclear Physics & Atomic Energy, 2012, v. 13, n. 2, p. 146
By:
- Makarets, M. V.;
- Petrenko, E. O.;
- Pugatch, V. M.
Publication type:
Article

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