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Improving the representativeness of UK's national COVID-19 Infection Survey through spatio-temporal regression and post-stratification.
- Published in:
- Nature Communications, 2024, v. 15, n. 1, p. 1, doi. 10.1038/s41467-024-49201-4
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- Article
Improving the representativeness of UK's national COVID-19 Infection Survey through spatio-temporal regression and post-stratification.
- Published in:
- Nature Communications, 2024, v. 15, n. 1, p. 1, doi. 10.1038/s41467-024-49201-4
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- Article
SARS-CoV-2, influenza A/B and respiratory syncytial virus positivity and association with influenza-like illness and self-reported symptoms, over the 2022/23 winter season in the UK: a longitudinal surveillance cohort.
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- BMC Medicine, 2024, v. 22, n. 1, p. 1, doi. 10.1186/s12916-024-03351-w
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- Article
Protection against SARS-CoV-2 Omicron BA.4/5 variant following booster vaccination or breakthrough infection in the UK.
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- Nature Communications, 2023, n. 1, p. 1, doi. 10.1038/s41467-023-38275-1
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- Article
The quality of vital signs measurements and value preferences in electronic medical records varies by hospital, specialty, and patient demographics.
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- Scientific Reports, 2023, v. 13, n. 1, p. 1, doi. 10.1038/s41598-023-30691-z
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- Article
Omicron-Associated Changes in Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) Symptoms in the United Kingdom.
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- Clinical Infectious Diseases, 2023, v. 76, n. 3, p. e133, doi. 10.1093/cid/ciac613
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Health record hiccups—5,526 real-world time series with change points labelled by crowdsourced visual inspection.
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- GigaScience, 2023, v. 12, n. 1, p. 1, doi. 10.1093/gigascience/giad060
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Mortality risks associated with empirical antibiotic activity in Escherichia coli bacteraemia: an analysis of electronic health records.
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- 2022
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- journal article
Symptoms and Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) Positivity in the General Population in the United Kingdom.
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- Clinical Infectious Diseases, 2022, v. 75, n. 1, p. e329, doi. 10.1093/cid/ciab945
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- Article
SARS-CoV-2 antibody trajectories after a single COVID-19 vaccination with and without prior infection.
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- Nature Communications, 2022, v. 13, n. 1, p. 1, doi. 10.1038/s41467-022-31495-x
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- Article
Feasibility and acceptability of daily testing at school as an alternative to self-isolation following close contact with a confirmed case of COVID-19: a qualitative analysis.
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- BMC Public Health, 2022, v. 22, n. 1, p. 1, doi. 10.1186/s12889-022-13204-x
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- Article
Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) Infectivity by Viral Load, S Gene Variants and Demographic Factors, and the Utility of Lateral Flow Devices to Prevent Transmission.
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- Clinical Infectious Diseases, 2022, v. 74, n. 3, p. 407, doi. 10.1093/cid/ciab421
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- Article
Antimicrobial resistance in commensal opportunistic pathogens isolated from non-sterile sites can be an effective proxy for surveillance in bloodstream infections.
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- Scientific Reports, 2021, v. 11, n. 1, p. 1, doi. 10.1038/s41598-021-02755-5
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Improving patient flow during infectious disease outbreaks using machine learning for real-time prediction of patient readiness for discharge.
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- PLoS ONE, 2021, v. 16, n. 11, p. 1, doi. 10.1371/journal.pone.0260476
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Anti-spike antibody response to natural SARS-CoV-2 infection in the general population.
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- Nature Communications, 2021, v. 12, n. 1, p. 1, doi. 10.1038/s41467-021-26479-2
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Human and Porcine Transmission of Clostridioides difficile Ribotype 078, Europe.
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- 2021
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- journal article
Preferences for Medical Consultations from Online Providers: Evidence from a Discrete Choice Experiment in the United Kingdom.
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- Applied Health Economics & Health Policy, 2021, v. 19, n. 4, p. 521, doi. 10.1007/s40258-021-00642-8
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- Article
Awareness of Appropriate Antibiotic Use in Primary Care for Influenza-Like Illness: Evidence of Improvement from UK Population-Based Surveys.
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- Antibiotics (2079-6382), 2020, v. 9, n. 10, p. 690, doi. 10.3390/antibiotics9100690
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Why do hospital prescribers continue antibiotics when it is safe to stop? Results of a choice experiment survey.
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- 2020
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- journal article
Reducing expectations for antibiotics in primary care: a randomised experiment to test the response to fear-based messages about antimicrobial resistance.
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- 2020
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- journal article
Patient engagement with antibiotic messaging in secondary care: a qualitative feasibility study of the 'review and revise' experience.
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- Pilot & Feasibility Studies, 2020, v. 6, n. 1, p. 1, doi. 10.1186/s40814-020-00590-5
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- Article
Selective culture enrichment and sequencing of feces to enhance detection of antimicrobial resistance genes in third-generation cephalosporin resistant Enterobacteriaceae.
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- PLoS ONE, 2019, v. 14, n. 11, p. 1, doi. 10.1371/journal.pone.0222831
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The impact of sequencing depth on the inferred taxonomic composition and AMR gene content of metagenomic samples.
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- Environmental Microbiome, 2019, v. 14, n. 1, p. N.PAG, doi. 10.1186/s40793-019-0347-1
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'Caveat emptor': the cautionary tale of endocarditis and the potential pitfalls of clinical coding data-an electronic health records study.
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- 2019
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- journal article
Using hospital network-based surveillance for antimicrobial resistance as a more robust alternative to self-reporting.
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- PLoS ONE, 2019, v. 14, n. 7, p. 1, doi. 10.1371/journal.pone.0219994
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WGS to determine the extent of Clostridioides difficile transmission in a high incidence setting in North Wales in 2015.
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- 2019
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- journal article
SNP-IT Tool for Identifying Subspecies and Associated Lineages of Mycobacterium tuberculosis Complex.
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- 2019
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- journal article
Two Distinct Patterns of Clostridium difficile Diversity Across Europe Indicating Contrasting Routes of Spread.
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- Clinical Infectious Diseases, 2018, v. 67, n. 7, p. 1035, doi. 10.1093/cid/ciy252
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- Article
Real-time analysis of nanopore-based metagenomic sequencing from infected orthopaedic devices.
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- BMC Genomics, 2018, v. 19, n. 1, p. 1, doi. 10.1186/s12864-018-5094-y
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- Article
Gonorrhoea treatment failure caused by a Neisseria gonorrhoeae strain with combined ceftriaxone and high-level azithromycin resistance, England, February 2018.
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- Eurosurveillance (15607917), 2018, v. 23, n. 27, p. 1, doi. 10.2807/1560-7917.ES.2018.23.27.1800323
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Reducing demand for antibiotic prescriptions: evidence from an online survey of the general public on the interaction between preferences, beliefs and information, United Kingdom, 2015.
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- Eurosurveillance (15607917), 2018, v. 23, n. 25, p. 13, doi. 10.2807/1560-7917.ES.2018.23.25.1700424
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Machine learning for classifying tuberculosis drug-resistance from DNA sequencing data.
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- Bioinformatics, 2018, v. 34, n. 10, p. 1666, doi. 10.1093/bioinformatics/btx801
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BugMat and FindNeighbour: command line and server applications for investigating bacterial relatedness.
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- BMC Bioinformatics, 2017, v. 18, p. 1, doi. 10.1186/s12859-017-1907-2
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- Article
Covert dissemination of carbapenemase-producing Klebsiella pneumoniae (KPC) in a successfully controlled outbreak: long- and short-read whole-genome sequencing demonstrate multiple genetic modes of transmission.
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- 2017
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- journal article
Epidemiology of Clostridium difficile in infants in Oxfordshire, UK: Risk factors for colonization and carriage, and genetic overlap with regional C. difficile infection strains.
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- PLoS ONE, 2017, v. 12, n. 8, p. 1, doi. 10.1371/journal.pone.0182307
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Comparison of Control of Clostridium difficile Infection in Six English Hospitals Using Whole-Genome Sequencing.
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- Clinical Infectious Diseases, 2017, v. 65, n. 3, p. 433, doi. 10.1093/cid/cix338
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WGS to predict antibiotic MICs for Neisseria gonorrhoeae.
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- 2017
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- journal article
The relative importance of large problems far away versus small problems closer to home: insights into limiting the spread of antimicrobial resistance in England.
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- 2017
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- journal article
Plasmid Classification in an Era of Whole-Genome Sequencing: Application in Studies of Antibiotic Resistance Epidemiology.
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- Frontiers in Microbiology, 2017, v. 8, p. 1, doi. 10.3389/fmicb.2017.00182
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The evolutionary and clinical implications of the uneven distribution of the frequency of the inherited haemoglobin variants over short geographical distances.
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- British Journal of Haematology, 2017, v. 176, n. 3, p. 475, doi. 10.1111/bjh.14437
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- Article
Whole-Genome Sequencing Demonstrates That Fidaxomicin Is Superior to Vancomycin for Preventing Reinfection and Relapse of Infection With Clostridium difficile.
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- Journal of Infectious Diseases, 2014, v. 209, n. 9, p. 1446, doi. 10.1093/infdis/jit598
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- Article
Mobile elements drive recombination hotspots in the core genome of Staphylococcus aureus.
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- Nature Communications, 2014, v. 5, n. 5, p. 3956, doi. 10.1038/ncomms4956
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Whole genome sequencing and de novo assembly identifies Sydney-like variant noroviruses and recombinants during the winter 2012/2013 outbreak in England.
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- Virology Journal, 2013, v. 10, n. 1, p. 1, doi. 10.1186/1743-422X-10-335
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- Article
Asymptomatic <i>Clostridium difficile</i> Colonisation and Onward Transmission.
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- PLoS ONE, 2013, v. 8, n. 11, p. 1, doi. 10.1371/journal.pone.0078445
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Regarding “Clostridium Difficile Ribotype Does Not Predict Severe Infection”.
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- Clinical Infectious Diseases, 2013, v. 56, n. 12, p. 1845, doi. 10.1093/cid/cit098
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Relationship Between Bacterial Strain Type, Host Biomarkers, and Mortality in Clostridium difficile Infection.
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- Clinical Infectious Diseases, 2013, v. 56, n. 11, p. 1589
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- Article
A Modified RNA-Seq Approach for Whole Genome Sequencing of RNA Viruses from Faecal and Blood Samples.
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- PLoS ONE, 2013, v. 8, n. 6, p. 1, doi. 10.1371/journal.pone.0066129
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Detection of Mixed Infection from Bacterial Whole Genome Sequence Data Allows Assessment of Its Role in <i>Clostridium difficile</i> Transmission
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- PLoS Computational Biology, 2013, v. 9, n. 5, p. 1, doi. 10.1371/journal.pcbi.1003059
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- Article
Short-Term Genome Stability of Serial <i>Clostridium difficile</i> Ribotype 027 Isolates in an Experimental Gut Model and Recurrent Human Disease
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- PLoS ONE, 2013, v. 8, n. 5, p. 1, doi. 10.1371/journal.pone.0063540
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When enough is enough: how the decision was made to stop the FEAST trial: data and safety monitoring in an African trial of Fluid Expansion As Supportive Therapy (FEAST) for critically ill children.
- Published in:
- Trials, 2013, v. 14, n. 1, p. 1, doi. 10.1186/1745-6215-14-85
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