Works by Pekmezci, Melike

Results: 67
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    Clinicopathologic features of anaplastic myxopapillary ependymomas.

    Published in:
    Brain Pathology, 2019, v. 29, n. 1, p. 75, doi. 10.1111/bpa.12673
    By:
    • Lee, Julieann C.;
    • Sharifai, Nima;
    • Dahiya, Sonika;
    • Kleinschmidt‐DeMasters, Bette K.;
    • Rosenblum, Marc K.;
    • Reis, Gerald F.;
    • Samuel, David;
    • Siongco, Aleli M.;
    • Santi, Mariarita;
    • Storm, Phillip B.;
    • Ferris, Sean P.;
    • Bollen, Andrew W.;
    • Pekmezci, Melike;
    • Solomon, David A.;
    • Tihan, Tarik;
    • Perry, Arie
    Publication type:
    Article
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    The genetic landscape of anaplastic pleomorphic xanthoastrocytoma.

    Published in:
    Brain Pathology, 2019, v. 29, n. 1, p. 85, doi. 10.1111/bpa.12639
    By:
    • Phillips, Joanna J.;
    • Gong, Henry;
    • Chen, Katharine;
    • Joseph, Nancy M.;
    • van Ziffle, Jessica;
    • Bastian, Boris C.;
    • Grenert, James P.;
    • Kline, Cassie N.;
    • Mueller, Sabine;
    • Banerjee, Anuradha;
    • Nicolaides, Theodore;
    • Gupta, Nalin;
    • Berger, Mitchel S.;
    • Lee, Han S.;
    • Pekmezci, Melike;
    • Tihan, Tarik;
    • Bollen, Andrew W.;
    • Perry, Arie;
    • Shieh, Joseph T.C.;
    • Solomon, David A.
    Publication type:
    Article
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    High-Grade Progression, Sarcomatous Transformation, and/or Metastasis of Pituitary Neuroendocrine Neoplasms (PitNENs): The UCSF Experience.

    Published in:
    Endocrine Pathology, 2024, v. 35, n. 4, p. 338, doi. 10.1007/s12022-024-09829-w
    By:
    • Terry, Merryl;
    • Nguyen, Minh P.;
    • Tang, Vivian;
    • Guney, Ekin;
    • Bharani, Krishna L.;
    • Dahiya, Sonika;
    • Choutka, Ondrej;
    • Borys, Ewa;
    • Reis, Gerald;
    • Blevins, Lewis;
    • Aghi, Manish K.;
    • Kunwar, Sandeep;
    • DeGroot, John;
    • Raleigh, David R.;
    • Pekmezci, Melike;
    • Bollen, Andrew W.;
    • Cha, Soonmee;
    • Joseph, Nancy M.;
    • Perry, Arie
    Publication type:
    Article
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    Variants near TERT and TERC influencing telomere length are associated with high-grade glioma risk.

    Published in:
    Nature Genetics, 2014, v. 46, n. 7, p. 731, doi. 10.1038/ng.3004
    By:
    • Walsh, Kyle M;
    • Codd, Veryan;
    • Smirnov, Ivan V;
    • Rice, Terri;
    • Decker, Paul A;
    • Hansen, Helen M;
    • Kollmeyer, Thomas;
    • Kosel, Matthew L;
    • Molinaro, Annette M;
    • McCoy, Lucie S;
    • Bracci, Paige M;
    • Cabriga, Belinda S;
    • Pekmezci, Melike;
    • Zheng, Shichun;
    • Wiemels, Joseph L;
    • Pico, Alexander R;
    • Tihan, Tarik;
    • Berger, Mitchell S;
    • Chang, Susan M;
    • Prados, Michael D
    Publication type:
    Article
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    The genetic landscape of ganglioglioma.

    Published in:
    Acta Neuropathologica Communications, 2018, v. 6, n. 1, p. N.PAG, doi. 10.1186/s40478-018-0551-z
    By:
    • Pekmezci, Melike;
    • Villanueva-Meyer, Javier E.;
    • Goode, Benjamin;
    • Van Ziffle, Jessica;
    • Onodera, Courtney;
    • Grenert, James P.;
    • Bastian, Boris C.;
    • Chamyan, Gabriel;
    • Maher, Ossama M.;
    • Khatib, Ziad;
    • Kleinschmidt-DeMasters, Bette K.;
    • Samuel, David;
    • Mueller, Sabine;
    • Banerjee, Anuradha;
    • Clarke, Jennifer L.;
    • Cooney, Tabitha;
    • Torkildson, Joseph;
    • Gupta, Nalin;
    • Theodosopoulos, Philip;
    • Chang, Edward F.
    Publication type:
    Article
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    Consensus recommendations for an integrated diagnostic approach to peripheral nerve sheath tumors arising in the setting of Neurofibromatosis Type 1.

    Published in:
    Neuro-Oncology, 2025, v. 27, n. 3, p. 616, doi. 10.1093/neuonc/noae235
    By:
    • Lucas, Calixto-Hope G;
    • Gross, Andrea M;
    • Romo, Carlos G;
    • Dehner, Carina A;
    • Lazar, Alexander J;
    • Miettinen, Markku;
    • Pekmezci, Melike;
    • Quezado, Martha;
    • Rodriguez, Fausto J;
    • Stemmer-Rachamimov, Anat;
    • Viskochil, David;
    • Perry, Arie;
    • Members, the Symposium on Atypical Neurofibroma: State of the Science
    Publication type:
    Article
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    Longitudinal multimodal profiling of IDH-wildtype glioblastoma reveals the molecular evolution and cellular phenotypes underlying prognostically different treatment responses.

    Published in:
    Neuro-Oncology, 2025, v. 27, n. 1, p. 89, doi. 10.1093/neuonc/noae214
    By:
    • Lucas, Calixto-Hope G;
    • Al-Adli, Nadeem N;
    • Young, Jacob S;
    • Gupta, Rohit;
    • Morshed, Ramin A;
    • Wu, Jasper;
    • Ravindranathan, Ajay;
    • Shai, Anny;
    • Bush, Nancy Ann Oberheim;
    • Taylor, Jennie W;
    • Groot, John de;
    • Villanueva-Meyer, Javier E;
    • Pekmezci, Melike;
    • Perry, Arie;
    • Bollen, Andrew W;
    • Theodosopoulos, Philip V;
    • Aghi, Manish K;
    • Chang, Edward F;
    • Hervey-Jumper, Shawn L;
    • Raleigh, David R
    Publication type:
    Article
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    Novel SOX10 indel mutations drive schwannomas through impaired transactivation of myelination gene programs.

    Published in:
    Neuro-Oncology, 2023, v. 25, n. 12, p. 2221, doi. 10.1093/neuonc/noad121
    By:
    • Williams, Erik A;
    • Ravindranathan, Ajay;
    • Gupta, Rohit;
    • Stevers, Nicholas O;
    • Suwala, Abigail K;
    • Hong, Chibo;
    • Kim, Somang;
    • Yuan, Jimmy Bo;
    • Wu, Jasper;
    • Barreto, Jairo;
    • Lucas, Calixto-Hope G;
    • Chan, Emily;
    • Pekmezci, Melike;
    • LeBoit, Philip E;
    • Mully, Thaddeus;
    • Perry, Arie;
    • Bollen, Andrew;
    • Ziffle, Jessica Van;
    • Devine, W Patrick;
    • Reddy, Alyssa T
    Publication type:
    Article
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    Prospective genomically guided identification of "early/evolving" and "undersampled" IDH-wildtype glioblastoma leads to improved clinical outcomes.

    Published in:
    Neuro-Oncology, 2022, v. 24, p. 1749, doi. 10.1093/neuonc/noac089
    By:
    • Zhang, Yalan;
    • Lucas, Calixto-Hope G;
    • Young, Jacob S;
    • Morshed, Ramin A;
    • McCoy, Lucie;
    • Bush, Nancy Ann Oberheim;
    • Taylor, Jennie W;
    • Daras, Mariza;
    • Butowski, Nicholas A;
    • Villanueva-Meyer, Javier E;
    • Cha, Soonmee;
    • Wrensch, Margaret;
    • Wiencke, John K;
    • Lee, Julieann C;
    • Pekmezci, Melike;
    • Phillips, Joanna J;
    • Perry, Arie;
    • Bollen, Andrew W;
    • Aghi, Manish K;
    • Theodosopoulos, Philip
    Publication type:
    Article
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    Adult diffuse glioma GWAS by molecular subtype identifies variants in D2HGDH and FAM20C.

    Published in:
    Neuro-Oncology, 2020, v. 22, n. 11, p. 1602, doi. 10.1093/neuonc/noaa117
    By:
    • Eckel-Passow, Jeanette E;
    • Drucker, Kristen L;
    • Kollmeyer, Thomas M;
    • Kosel, Matt L;
    • Decker, Paul A;
    • Molinaro, Annette M;
    • Rice, Terri;
    • Praska, Corinne E;
    • Clark, Lauren;
    • Caron, Alissa;
    • Abyzov, Alexej;
    • Batzler, Anthony;
    • Song, Jun S;
    • Pekmezci, Melike;
    • Hansen, Helen M;
    • McCoy, Lucie S;
    • Bracci, Paige M;
    • Wiemels, Joseph;
    • Wiencke, John K;
    • Francis, Stephen
    Publication type:
    Article
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    Lowered H3K27me3 and DNA hypomethylation define poorly prognostic pediatric posterior fossa ependymomas.

    Published in:
    Science Translational Medicine, 2016, v. 8, n. 366, p. 1, doi. 10.1126/scitranslmed.aah6904
    By:
    • Bayliss, Jill;
    • Mukherjee, Piali;
    • Chao Lu;
    • Jain, Siddhant U.;
    • Chan Chung;
    • Martinez, Daniel;
    • Sabari, Benjamin;
    • Margol, Ashley S.;
    • Panwalkar, Pooja;
    • Parolia, Abhijit;
    • Pekmezci, Melike;
    • McEachin, Richard C.;
    • Cieslik, Marcin;
    • Tamrazi, Benita;
    • Garcia, Benjamin A.;
    • La Rocca, Gaspare;
    • Santi, Mariarita;
    • Lewis, Peter W.;
    • Hawkins, Cynthia;
    • Melnick, Ari
    Publication type:
    Article
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    Epigenetic reprogramming shapes the cellular landscape of schwannoma.

    Published in:
    Nature Communications, 2024, v. 15, n. 1, p. 1, doi. 10.1038/s41467-023-40408-5
    By:
    • Liu, S. John;
    • Casey-Clyde, Tim;
    • Cho, Nam Woo;
    • Swinderman, Jason;
    • Pekmezci, Melike;
    • Dougherty, Mark C.;
    • Foster, Kyla;
    • Chen, William C.;
    • Villanueva-Meyer, Javier E.;
    • Swaney, Danielle L.;
    • Vasudevan, Harish N.;
    • Choudhury, Abrar;
    • Pak, Joanna;
    • Breshears, Jonathan D.;
    • Lang, Ursula E.;
    • Eaton, Charlotte D.;
    • Hiam-Galvez, Kamir J.;
    • Stevenson, Erica;
    • Chen, Kuei-Ho;
    • Lien, Brian V.
    Publication type:
    Article
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    Functional interactions between neurofibromatosis tumor suppressors underlie Schwann cell tumor de-differentiation and treatment resistance.

    Published in:
    Nature Communications, 2024, v. 15, n. 1, p. 1, doi. 10.1038/s41467-024-44755-9
    By:
    • Vasudevan, Harish N.;
    • Payne, Emily;
    • Delley, Cyrille L.;
    • John Liu, S.;
    • Mirchia, Kanish;
    • Sale, Matthew J.;
    • Lastella, Sydney;
    • Nunez, Maria Sacconi;
    • Lucas, Calixto-Hope G.;
    • Eaton, Charlotte D.;
    • Casey-Clyde, Tim;
    • Magill, Stephen T.;
    • Chen, William C.;
    • Braunstein, Steve E.;
    • Perry, Arie;
    • Jacques, Line;
    • Reddy, Alyssa T.;
    • Pekmezci, Melike;
    • Abate, Adam R.;
    • McCormick, Frank
    Publication type:
    Article
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    Epigenetic reprogramming shapes the cellular landscape of schwannoma.

    Published in:
    Nature Communications, 2024, v. 15, n. 1, p. 1, doi. 10.1038/s41467-023-40408-5
    By:
    • Liu, S. John;
    • Casey-Clyde, Tim;
    • Cho, Nam Woo;
    • Swinderman, Jason;
    • Pekmezci, Melike;
    • Dougherty, Mark C.;
    • Foster, Kyla;
    • Chen, William C.;
    • Villanueva-Meyer, Javier E.;
    • Swaney, Danielle L.;
    • Vasudevan, Harish N.;
    • Choudhury, Abrar;
    • Pak, Joanna;
    • Breshears, Jonathan D.;
    • Lang, Ursula E.;
    • Eaton, Charlotte D.;
    • Hiam-Galvez, Kamir J.;
    • Stevenson, Erica;
    • Chen, Kuei-Ho;
    • Lien, Brian V.
    Publication type:
    Article
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    Neuropathology of brain metastases.

    Published in:
    Surgical Neurology International, 2013, v. 4, n. Supp 4, p. S245, doi. 10.4103/2152-7806.111302
    By:
    • Pekmezci, Melike;
    • Perry, Arie
    Publication type:
    Article
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    Neuropathology of brain metastases.

    Published in:
    Surgical Neurology International, 2013, v. 4, n. 5, p. S245, doi. 10.4103/2152-7806.111302
    By:
    • Pekmezci, Melike;
    • Perry, Arie
    Publication type:
    Article
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    “De novo replication repair deficient glioblastoma, IDH-wildtype” is a distinct glioblastoma subtype in adults that may benefit from immune checkpoint blockade.

    Published in:
    Acta Neuropathologica, 2024, v. 147, n. 1, p. 1, doi. 10.1007/s00401-023-02654-1
    By:
    • Hadad, Sara;
    • Gupta, Rohit;
    • Oberheim Bush, Nancy Ann;
    • Taylor, Jennie W.;
    • Villanueva-Meyer, Javier E.;
    • Young, Jacob S.;
    • Wu, Jasper;
    • Ravindranathan, Ajay;
    • Zhang, Yalan;
    • Warrier, Gayathri;
    • McCoy, Lucie;
    • Shai, Anny;
    • Pekmezci, Melike;
    • Perry, Arie;
    • Bollen, Andrew W.;
    • Phillips, Joanna J.;
    • Braunstein, Steve E.;
    • Raleigh, David R.;
    • Theodosopoulos, Philip;
    • Aghi, Manish K.
    Publication type:
    Article
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    Intratumor and informatic heterogeneity influence meningioma molecular classification.

    Published in:
    Acta Neuropathologica, 2022, v. 144, n. 3, p. 579, doi. 10.1007/s00401-022-02455-y
    By:
    • Vasudevan, Harish N.;
    • Choudhury, Abrar;
    • Hilz, Stephanie;
    • Villanueva-Meyer, Javier E.;
    • Chen, William C.;
    • Lucas, Calixto-Hope G.;
    • Braunstein, Steve E.;
    • Oberheim Bush, Nancy Ann;
    • Butowski, Nicholas;
    • Pekmezci, Melike;
    • McDermott, Michael W.;
    • Perry, Arie;
    • Solomon, David A.;
    • Magill, Stephen T.;
    • Raleigh, David R.
    Publication type:
    Article
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    The immunohistochemical, DNA methylation, and chromosomal copy number profile of cauda equina paraganglioma is distinct from extra-spinal paraganglioma.

    Published in:
    Acta Neuropathologica, 2020, v. 140, n. 6, p. 907, doi. 10.1007/s00401-020-02221-y
    By:
    • Ramani, Biswarathan;
    • Gupta, Rohit;
    • Wu, Jasper;
    • Barreto, Jairo;
    • Bollen, Andrew W.;
    • Tihan, Tarik;
    • Mummaneni, Praveen V.;
    • Ames, Christopher;
    • Clark, Aaron;
    • Oberheim Bush, Nancy Ann;
    • Butowski, Nicholas;
    • Phillips, Daniel;
    • King, Bruce E.;
    • Bator, Susan M.;
    • Treynor, Elizabeth C.;
    • Zherebitskiy, Viktor;
    • Quinn, Paula S.;
    • Walker, Jeffrey B.;
    • Pekmezci, Melike;
    • Sullivan, Daniel V.
    Publication type:
    Article
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    Immunohistochemical analysis of H3K27me3 demonstrates global reduction in group-A childhood posterior fossa ependymoma and is a powerful predictor of outcome.

    Published in:
    Acta Neuropathologica, 2017, v. 134, n. 5, p. 705, doi. 10.1007/s00401-017-1752-4
    By:
    • Panwalkar, Pooja;
    • Clark, Jonathan;
    • Ramaswamy, Vijay;
    • Hawes, Debra;
    • Yang, Fusheng;
    • Dunham, Christopher;
    • Yip, Stephen;
    • Hukin, Juliette;
    • Sun, Yilun;
    • Schipper, Matthew;
    • Chavez, Lukas;
    • Margol, Ashley;
    • Pekmezci, Melike;
    • Chung, Chan;
    • Banda, Adam;
    • Bayliss, Jill;
    • Curry, Sarah;
    • Santi, Mariarita;
    • Rodriguez, Fausto;
    • Snuderl, Matija
    Publication type:
    Article
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    Adult infiltrating gliomas with WHO 2016 integrated diagnosis: additional prognostic roles of ATRX and TERT.

    Published in:
    Acta Neuropathologica, 2017, v. 133, n. 6, p. 1001, doi. 10.1007/s00401-017-1690-1
    By:
    • Pekmezci, Melike;
    • Rice, Terri;
    • Molinaro, Annette;
    • Walsh, Kyle;
    • Decker, Paul;
    • Hansen, Helen;
    • Sicotte, Hugues;
    • Kollmeyer, Thomas;
    • McCoy, Lucie;
    • Sarkar, Gobinda;
    • Perry, Arie;
    • Giannini, Caterina;
    • Tihan, Tarik;
    • Berger, Mitchel;
    • Wiemels, Joseph;
    • Bracci, Paige;
    • Eckel-Passow, Jeanette;
    • Lachance, Daniel;
    • Clarke, Jennifer;
    • Taylor, Jennie
    Publication type:
    Article
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    CNS angiocentric stromal tumor (CAST), PDGFRA-mutant, a novel entity histologically mimicking meningioangiomatosis and radiologically correlating with giant Virchow–Robin spaces.

    Published in:
    2025
    By:
    • Guney, Ekin;
    • Mirchia, Kanish;
    • Schmid, Simone;
    • Capper, David;
    • Meinhardt, Jenny;
    • Cha, Soonmee;
    • Lee, Han;
    • Brathwaite, Carole;
    • Altman, Nolan;
    • Sloan, Emily A.;
    • Sayah, Anousheh;
    • McGrail, Kevin;
    • Caliskan, Ilay;
    • Terry, Merryl;
    • Perez, Sandra;
    • Bollen, Andrew W.;
    • Tihan, Tarik;
    • Pekmezci, Melike;
    • Perry, Arie
    Publication type:
    Letter
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    Multiplatform genomic profiling and magnetic resonance imaging identify mechanisms underlying intratumor heterogeneity in meningioma.

    Published in:
    Nature Communications, 2020, v. 11, n. 1, p. N.PAG, doi. 10.1038/s41467-020-18582-7
    By:
    • Magill, Stephen T.;
    • Vasudevan, Harish N.;
    • Seo, Kyounghee;
    • Villanueva-Meyer, Javier E.;
    • Choudhury, Abrar;
    • John Liu, S.;
    • Pekmezci, Melike;
    • Findakly, Sarah;
    • Hilz, Stephanie;
    • Lastella, Sydney;
    • Demaree, Benjamin;
    • Braunstein, Steve E.;
    • Bush, Nancy Ann Oberheim;
    • Aghi, Manish K.;
    • Theodosopoulos, Philip V.;
    • Sneed, Penny K.;
    • Abate, Adam R.;
    • Berger, Mitchel S.;
    • McDermott, Michael W.;
    • Lim, Daniel A.
    Publication type:
    Article
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    Genetic predisposition to longer telomere length and risk of childhood, adolescent and adult-onset ependymoma.

    Published in:
    Acta Neuropathologica Communications, 2020, v. 8, n. 1, p. N.PAG, doi. 10.1186/s40478-020-01038-w
    By:
    • Zhang, Chenan;
    • Ostrom, Quinn T.;
    • Semmes, Eleanor C.;
    • Ramaswamy, Vijay;
    • Hansen, Helen M.;
    • Morimoto, Libby;
    • de Smith, Adam J.;
    • Pekmezci, Melike;
    • Vaksman, Zalman;
    • Hakonarson, Hakon;
    • Diskin, Sharon J.;
    • Metayer, Catherine;
    • The Glioma International Case-Control Study (GICC);
    • Claus, Elizabeth B.;
    • Il'yasova, Dora;
    • Walsh, Kyle M.;
    • Schildkraut, Joellen;
    • Barnholtz-Sloan, Jill S.;
    • Olson, Sara H.;
    • Bernstein, Jonine L.
    Publication type:
    Article