Works matching AU Peipei Ping

Results: 41

Protein phosphatase 2Cm is a critical regulator of branched-chain amino acid catabolism in mice and cultured cells.

Published in:

2009

By:

Gang Lu;
Haipeng Sun;
Pengxiang She;
Ji-Youn Youn;
Warburton, Sarah;
Peipei Ping;
Vondriska, Thomas M.;
Hua Cai;
Lynch, Christopher J.;
Yibin Wang;
Lu, Gang;
Sun, Haipeng;
She, Pengxiang;
Youn, Ji-Youn;
Ping, Peipei;
Cai, Hua;
Wang, Yibin

Publication type:

journal article

Reactome enhanced pathway visualization.

Published in:

Bioinformatics, 2017, v. 33, n. 21, p. 3461, doi. 10.1093/bioinformatics/btx441

By:

Sidiropoulos, Konstantinos;
Viteri, Guilherme;
Sevilla, Cristoffer;
Jupe, Steve;
Webber, Marissa;
Orlic-Milacic, Marija;
Jassal, Bijay;
May, Bruce;
Shamovsky, Veronica;
Duenas, Corina;
Rothfels, Karen;
Matthews, Lisa;
Heeyeon Song;
Stein, Lincoln;
Haw, Robin;
D'eustachio, Peter;
Peipei Ping;
Hermjakob, Henning;
Fabregat, Antonio

Publication type:

Article

BioJS: an open source JavaScript framework for biological data visualization.

Published in:

Bioinformatics, 2013, v. 29, n. 8, p. 1103, doi. 10.1093/bioinformatics/btt100

By:

Gómez, John;
García, Leyla J.;
Salazar, Gustavo A.;
Villaveces, Jose;
Gore, Swanand;
García, Alexander;
Martín, Maria J.;
Launay, Guillaume;
Alcántara, Rafael;
del-Toro, Noemi;
Dumousseau, Marine;
Orchard, Sandra;
Velankar, Sameer;
Hermjakob, Henning;
Zong, Chenggong;
Ping, Peipei;
Corpas, Manuel;
Jiménez, Rafael C.

Publication type:

Article

Building an Ethical and Trustworthy Biomedical AI Ecosystem for the Translational and Clinical Integration of Foundation Models.

Published in:

Bioengineering (Basel), 2024, v. 11, n. 10, p. 984, doi. 10.3390/bioengineering11100984

By:

Sankar, Baradwaj Simha;
Gilliland, Destiny;
Rincon, Jack;
Hermjakob, Henning;
Yan, Yu;
Adam, Irsyad;
Lemaster, Gwyneth;
Wang, Dean;
Watson, Karol;
Bui, Alex;
Wang, Wei;
Ping, Peipei

Publication type:

Article

Machine Learning and Integrative Analysis of Biomedical Big Data.

Published in:

Genes, 2019, v. 10, n. 2, p. 87, doi. 10.3390/genes10020087

By:

Mirza, Bilal;
Wang, Wei;
Wang, Jie;
Choi, Howard;
Chung, Neo Christopher;
Ping, Peipei

Publication type:

Article

New Frontiers in Myocardial Protection: A Systems Biology Approach.

Published in:

Journal of Cardiovascular Pharmacology & Therapeutics, 2011, v. 16, n. 3/4, p. 285, doi. 10.1177/1074248411415855

By:

Lotz, Christopher;
Liem, David;
Ping, Peipei

Publication type:

Article

Comparison of Whole Blood and Peripheral Blood Mononuclear Cell Gene Expression for Evaluation of the Perioperative Inflammatory Response in Patients with Advanced Heart Failure.

Published in:

PLoS ONE, 2014, v. 9, n. 12, p. 1, doi. 10.1371/journal.pone.0115097

By:

Bondar, Galyna;
Cadeiras, Martin;
Wisniewski, Nicholas;
Maque, Jetrina;
Chittoor, Jay;
Chang, Eleanor;
Bakir, Maral;
Starling, Charlotte;
Shahzad, Khurram;
Ping, Peipei;
Reed, Elaine;
Deng, Mario

Publication type:

Article

Functional Recovery in Traumatic Spinal Cord Injury after Transplantation of Multineurotrophin-Expressing Glial-Restricted Precursor Cells.

Published in:

Journal of Neuroscience, 2005, v. 25, n. 30, p. 6947, doi. 10.1523/JNEUROSCI.1065-05.2005

By:

Qilin Cao;
Xiao-Ming Xu;
DeVries, William H.;
Enzmann, Gaby U.;
Peipei Ping;
Tsoulfas, Pantelis;
Wood, Patrick M.;
Bunge, Mary Bartlett;
Whittemore, Scott R.

Publication type:

Article

Reactome graph database: Efficient access to complex pathway data.

Published in:

PLoS Computational Biology, 2018, v. 14, n. 1, p. 1, doi. 10.1371/journal.pcbi.1005968

By:

Fabregat, Antonio;
Korninger, Florian;
Viteri, Guilherme;
Sidiropoulos, Konstantinos;
Marin-Garcia, Pablo;
Ping, Peipei;
Wu, Guanming;
Stein, Lincoln;
D’Eustachio, Peter;
Hermjakob, Henning

Publication type:

Article

Protein kinetic signatures of the remodeling heart following isoproterenol stimulation.

Published in:

Journal of Clinical Investigation, 2014, v. 124, n. 4, p. 1734, doi. 10.1172/JCI73787

By:

Lam, Maggie P. Y.;
Ding Wang;
Lau, Edward;
Liem, David A.;
Kim, Allen K.;
Ng, Dominic C. M.;
Xiangbo Liang;
Bleakley, Brian J.;
Chenguang Liu;
Tabaraki, Jason D.;
Cadeiras, Martin;
Yibin Wang;
Deng, Mario C.;
Peipei Ping

Publication type:

Article

Exploring proteasome complexes by proteomic approaches.

Published in:

Proteomics, 2007, v. 7, n. 7, p. 1047, doi. 10.1002/pmic.200600574

By:

Drews, Oliver;
Zong, Chenggong;
Ping, Peipei

Publication type:

Article

Publication Committee Meeting HUPO 5<sup>th</sup> Annual World Congress Long Beach, CA, USA 30 October 2006.

Published in:

Proteomics, 2007, v. 7, n. 7, p. 1009, doi. 10.1002/pmic.200700015

By:

Orchard, Sandra;
Heck, Albert;
Uhlen, Mathias;
Ping, Peipei

Publication type:

Article

A functional annotation of subproteomes in human plasma.

Published in:

Proteomics, 2005, v. 5, n. 13, p. 3506, doi. 10.1002/pmic.200500140

By:

Peipei Ping;
Thomas M. Vondriska;
Chad J. Creighton;
TKB Gandhi;
Ziping Yang;
Rajasree Menon;
Min-Seok Kwon;
Sang Yun Cho;
Garry Drwal;
Markus Kellmann;
Suraj Peri;
Shubha Suresh;
Mads Gronborg;
Henrik Molina;
Raghothama Chaerkady;
B. Rekha;
Arun S. Shet;
Robert E. Gerszten;
Haifeng Wu;
Mark Raftery

Publication type:

Article

Cardiovascular-related proteins identified in human plasma by the HUPO Plasma Proteome Project Pilot Phase.

Published in:

Proteomics, 2005, v. 5, n. 13, p. 3520, doi. 10.1002/pmic.200401308

By:

Beniam T. Berhane;
Chenggong Zong;
David A. Liem;
Aaron Huang;
Steven Le;
Ricky D. Edmondson;
Richard C. Jones;
Xin Qiao;
Julian P. Whitelegge;
Peipei Ping;
Thomas M. Vondriska

Publication type:

Article

Integrated omics dissection of proteome dynamics during cardiac remodeling.

Published in:

Nature Communications, 2018, v. 9, n. 1, p. 1, doi. 10.1038/s41467-017-02467-3

By:

Jie Wang;
Ng, Dominic C. M.;
Lee, Jessica M.;
Liem, David A.;
Ding Wang;
Bleakley, Brian J.;
Lau, Edward;
Quan Cao;
Lam, Maggie P. Y.;
Ping, Peipei;
Hermjakob, Henning

Publication type:

Article

The minimum information about a proteomics experiment (MIAPE).

Published in:

Nature Biotechnology, 2007, v. 25, n. 8, p. 887, doi. 10.1038/nbt1329

By:

Taylor, Chris F;
Paton, Norman W;
Lilley, Kathryn S;
Binz, Pierre-Alain;
Julian, Randall K;
Jones, Andrew R;
Zhu, Weimin;
Apweiler, Rolf;
Aebersold, Ruedi;
Deutsch, Eric W;
Dunn, Michael J;
Heck, Albert J R;
Leitner, Alexander;
Macht, Marcus;
Mann, Matthias;
Martens, Lennart;
Neubert, Thomas A;
Patterson, Scott D;
Ping, Peipei;
Seymour, Sean L

Publication type:

Article

Priorities and trends in the study of proteins in eye research, 1924-2014.

Published in:

Proteomics - Clinical Applications, 2015, v. 9, n. 11/12, p. 1105, doi. 10.1002/prca.201500006

By:

Semba, Richard D.;
Lam, Maggie;
Sun, Kai;
Zhang, Pingbo;
Schaumberg, Debra A.;
Ferrucci, Luigi;
Ping, Peipei;
Eyk, Jennifer E.

Publication type:

Article

Characterization of human plasma proteome dynamics using deuterium oxide.

Published in:

Proteomics - Clinical Applications, 2014, v. 8, n. 7/8, p. 610, doi. 10.1002/prca.201400038

By:

Wang, Ding;
Liem, David A.;
Lau, Edward;
Ng, Dominic C. M.;
Bleakley, Brian J.;
Cadeiras, Martin;
Deng, Mario C.;
Lam, Maggie P. Y.;
Ping, Peipei

Publication type:

Article

Lysine ubiquitination and acetylation of human cardiac 20S proteasomes.

Published in:

Proteomics - Clinical Applications, 2014, v. 8, n. 7/8, p. 590, doi. 10.1002/prca.201400029

By:

Zong, Nobel;
Ping, Peipei;
Lau, Edward;
Choi, Howard J. H.;
Ng, Dominic C. M.;
Meyer, David;
Fang, Caiyun;
Li, Haomin;
Wang, Ding;
Zelaya, Ivette M.;
Yates, John R.;
Lam, Maggie P. Y.

Publication type:

Article

Proteomic insights into cardiac cell death and survival.

Published in:

Proteomics - Clinical Applications, 2008, v. 2, n. 6, p. 837, doi. 10.1002/prca.200780121

By:

MacLellan, W. Robb;
Wang, Yibin;
Vondriska, Thomas M.;
Weiss, James N.;
Ping, Peipei

Publication type:

Article

Wiley-VCH and HUPO: A Global Effort to Advance Proteomic Science.

Published in:

Proteomics - Clinical Applications, 2008, v. 2, n. 1, p. 4, doi. 10.1002/prca.200890001

By:

Ping, Peipei;
Bergeron, John;
Apweiler, Rolf

Publication type:

Article

The human cardiac and skeletal muscle proteomes defined by transcriptomics and antibody-based profiling.

Published in:

BMC Genomics, 2015, v. 16, n. 1, p. 1, doi. 10.1186/s12864-015-1686-y

By:

Lindskog, Cecilia;
Linné, Jerker;
Fagerberg, Linn;
Hallström, Björn M.;
Sundberg, Carl Johan;
Lindholm, Malene;
Huss, Mikael;
Kampf, Caroline;
Choi, Howard;
Liem, David A.;
Peipei Ping;
Väremo, Leif;
Mardinoglu, Adil;
Nielsen, Jens;
Larsson, Erik;
Pontén, Fredrik;
Uhlén, Mathias

Publication type:

Article

The human cardiac and skeletal muscle proteomes defined by transcriptomics and antibody-based profiling

Published in:

BMC Genomics, 2015, v. 16, n. 1, p. 475, doi. 10.1186/s12864-015-1686-y

By:

Lindskog, Cecilia;
Linné, Jerker;
Fagerberg, Linn;
Hallström, Björn M;
Sundberg, Carl Johan;
Lindholm, Malene;
Huss, Mikael;
Kampf, Caroline;
Howard Choi;
Liem, David A;
Peipei Ping;
Väremo, Leif;
Mardinoglu, Adil;
Nielsen, Jens;
Larsson, Erik;
Pontén, Fredrik;
Uhlén, Mathias

Publication type:

Article

Mitochondrial aldehyde dehydrogenase 2 plays protective roles in heart failure after myocardial infarction via suppression of the cytosolic JNK/p53 pathway in mice.

Published in:

2014

By:

Sun, Aijun;
Zou, Yunzeng;
Wang, Ping;
Xu, Danling;
Gong, Hui;
Wang, Shijun;
Qin, Yingjie;
Zhang, Peng;
Chen, Yunqin;
Harada, Mutsuo;
Isse, Toyoshi;
Kawamoto, Toshihiro;
Fan, Huizhi;
Yang, Pengyuan;
Akazawa, Hiroshi;
Nagai, Toshio;
Takano, Hiroyuki;
Ping, Peipei;
Komuro, Issei;
Ge, Junbo

Publication type:

journal article

HUPO 2011: The New Cardiovascular Initiative - Integrating Proteomics and Cardiovascular Biology in Health and Disease.

Published in:

Proteomics, 2012, v. 12, n. 6, p. 749, doi. 10.1002/pmic.201270015

By:

Lam, Maggie P. Y.;
Vivanco, Fernando;
Scholten, Arjen;
Hermjakob, Henning;
Van Eyk, Jennifer;
Ping, Peipei

Publication type:

Article

HUPO World Congress Publication Committee Meeting August 2008, Amsterdam, The Netherlands.

Published in:

Proteomics, 2009, v. 9, n. 3, p. 502, doi. 10.1002/pmic.200800839

By:

Orchard, Sandra;
Ping, Peipei

Publication type:

Article

Systematic characterization of the murine mitochondrial proteome using functionally validated cardiac mitochondria.

Published in:

Proteomics, 2008, v. 8, n. 8, p. 1564, doi. 10.1002/pmic.200700851

By:

Zhang, Jun;
Li, Xiaohai;
Mueller, Michael;
Wang, Yueju;
Zong, Chenggong;
Deng, Ning;
Vondriska, Thomas M.;
Liem, David A.;
Yang, Jeong-In;
Korge, Paavo;
Honda, Henry;
Weiss, James N.;
Apweiler, Rolf;
Ping, Peipei

Publication type:

Article

Cardiovascular Initiative of the Human Proteome Organisation, 5th Workshop October 2007, Seoul, Korea.

Published in:

Proteomics, 2008, v. 8, n. 5, p. 924, doi. 10.1002/pmic.200701083

By:

Warburton, Sarah;
White, Melanie Y.;
Van Eyk, Jennifer E.;
Cotter, Robert J.;
Ping, Peipei;
Dunn, Michael J.;
Vondriska, Thomas M.

Publication type:

Article

Wiley-VCH and HUPO: A Global Effort to Advance Proteomic Science.

Published in:

Proteomics, 2008, v. 8, n. 1, p. 4, doi. 10.1002/pmic.200790108

By:

Ping, Peipei;
Bergeron, John;
Apweiler, Rolf

Publication type:

Article

An Exercise Immune Fitness Test to Unravel Disease Mechanisms—A Proof-of-Concept Heart Failure Study.

Published in:

Journal of Clinical Medicine, 2024, v. 13, n. 11, p. 3200, doi. 10.3390/jcm13113200

By:

Bondar, Galyna;
Mahapatra, Abhinandan Das;
Bao, Tra-Mi;
Silacheva, Irina;
Hairapetian, Adrian;
Vu, Thomas;
Su, Stephanie;
Katappagari, Ananya;
Galan, Liana;
Chandran, Joshua;
Adamov, Ruben;
Mancusi, Lorenzo;
Lai, Isabel;
Rahman, Anca;
Grogan, Tristan;
Hsu, Jeffrey J.;
Cappelletti, Monica;
Ping, Peipei;
Elashoff, David;
Reed, Elaine F.

Publication type:

Article

Characterization of the Cardiac Overexpression of HSPB2 Reveals Mitochondrial and Myogenic Roles Supported by a Cardiac HspB2 Interactome.

Published in:

PLoS ONE, 2015, v. 10, n. 10, p. 1, doi. 10.1371/journal.pone.0133994

By:

Grose, Julianne H.;
Langston, Kelsey;
Wang, Xiaohui;
Squires, Shayne;
Mustafi, Soumyajit Banerjee;
Hayes, Whitney;
Neubert, Jonathan;
Fischer, Susan K.;
Fasano, Matthew;
Saunders, Gina Moore;
Dai, Qiang;
Christians, Elisabeth;
Lewandowski, E. Douglas;
Ping, Peipei;
Benjamin, Ivor J.

Publication type:

Article

Cardiovascular informatics: building a bridge to data harmony.

Published in:

Cardiovascular Research, 2022, v. 118, n. 3, p. 732, doi. 10.1093/cvr/cvab067

By:

Caufield, John Harry;
Sigdel, Dibakar;
Fu, John;
Choi, Howard;
Guevara-Gonzalez, Vladimir;
Wang, Ding;
Ping, Peipei

Publication type:

Article

Cardiovascular proteomics in the era of big data: experimental and computational advances.

Published in:

Clinical Proteomics, 2016, v. 13, p. 1, doi. 10.1186/s12014-016-9124-y

By:

Lam, Maggie P. Y.;
Lau, Edward;
Ng, Dominic C. M.;
Ding Wang;
Peipei Ping

Publication type:

Article

Quantifying the impact of public omics data.

Published in:

Nature Communications, 2019, v. 10, n. 1, p. N.PAG, doi. 10.1038/s41467-019-11461-w

By:

Perez-Riverol, Yasset;
Zorin, Andrey;
Dass, Gaurhari;
Vu, Manh-Tu;
Xu, Pan;
Glont, Mihai;
Vizcaíno, Juan Antonio;
Jarnuczak, Andrew F.;
Petryszak, Robert;
Ping, Peipei;
Hermjakob, Henning

Publication type:

Article

The Murine Cardiac 26S Proteasome: An Organelle Awaiting Exploration.

Published in:

Annals of the New York Academy of Sciences, 2005, v. 1047, n. 1, p. 197, doi. 10.1196/annals.1341.018

By:

GOMES, ALDRIN V.;
ZONG, CHENGGONG;
EDMONDSON, RICKY D.;
BERHANE, BENIAM T.;
WANG, GUANG‐WU;
LE, STEVEN;
YOUNG, GLEN;
ZHANG, JUN;
VONDRISKA, THOMAS M.;
WHITELEGGE, JULIAN P.;
JONES, RICHARD C.;
JOSHUA, IRVING G.;
THYPARAMBIL, SHEENO;
PANTALEON, DAWN;
QIAO, JOE;
LOO, JOSEPH;
PING, PEIPEI

Publication type:

Article

Reactome diagram viewer: data structures and strategies to boost performance.

Published in:

Bioinformatics, 2018, v. 34, n. 7, p. 1208, doi. 10.1093/bioinformatics/btx752

By:

Fabregat, Antonio;
Sidiropoulos, Konstantinos;
Viteri, Guilherme;
Marin-Garcia, Pablo;
Ping, Peipei;
Stein, Lincoln;
D'Eustachio, Peter;
Hermjakob, Henning

Publication type:

Article

The contribution of Alu exons to the human proteome.

Published in:

Genome Biology, 2016, v. 17, p. 1, doi. 10.1186/s13059-016-0876-5

By:

Lan Lin;
Peng Jiang;
Juw Won Park;
Jinkai Wang;
Zhi-xiang Lu;
Lam, Maggie P. Y.;
Peipei Ping;
Yi Xing

Publication type:

Article

Protein kinases and kinase-modulated effectors in the late phase of ischemic preconditioning.

Published in:

Basic Research in Cardiology, 2001, v. 96, n. 3, p. 207, doi. 10.1007/s003950170051

By:

Baines, Christopher P.;
Pass, Jason M.;
Ping, Peipei

Publication type:

Article

Data-Driven Insights into the Association Between Oxidative Stress and Calcium-Regulating Proteins in Cardiovascular Disease.

Published in:

Antioxidants, 2024, v. 13, n. 11, p. 1420, doi. 10.3390/antiox13111420

By:

Panday, Namuna;
Sigdel, Dibakar;
Adam, Irsyad;
Ramirez, Joseph;
Verma, Aarushi;
Eranki, Anirudh N.;
Wang, Wei;
Wang, Ding;
Ping, Peipei

Publication type:

Article

Spatial and temporal dynamics of the cardiac mitochondrial proteome.

Published in:

Expert Review of Proteomics, 2015, v. 12, n. 2, p. 133, doi. 10.1586/14789450.2015.1024227

By:

Lau, Edward;
Huang, Derrick;
Cao, Quan;
Dincer, T Umut;
Black, Caitie M;
Lin, Amanda J;
Lee, Jessica M;
Wang, Ding;
Liem, David A;
Lam, Maggie PY;
Ping, Peipei

Publication type:

Article

HUPO 3rd Annual World Congress on Proteomics.

Published in:

Expert Review of Proteomics, 2005, v. 2, n. 1, p. 9, doi. 10.1586/14789450.2.1.9

By:

Omenn, Gilbert S.;
Ping, Peipei

Publication type:

Article