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Protein Frustratometer 2: a tool to localize energetic frustration in protein molecules, now with electrostatics.
- Published in:
- Nucleic Acids Research, 2016, v. 44, n. W1, p. W256, doi. 10.1093/nar/gkw304
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- Article
RepeatsDB: a database of tandem repeat protein structures.
- Published in:
- Nucleic Acids Research, 2014, v. 42, n. D1, p. D352, doi. 10.1093/nar/gkt1175
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- Article
Protein frustratometer: a tool to localize energetic frustration in protein molecules.
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- Nucleic Acids Research, 2012, v. 40, p. W348, doi. 10.1093/nar/gks447
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- Publication type:
- Article
FrustratometeR: an R-package to compute local frustration in protein structures, point mutants and MD simulations.
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- Bioinformatics, 2021, v. 37, n. 18, p. 3038, doi. 10.1093/bioinformatics/btab176
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- Article
Protein Repeats from First Principles.
- Published in:
- Scientific Reports, 2016, p. 23959, doi. 10.1038/srep23959
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- Article
Local energetic frustration conservation in protein families and superfamilies.
- Published in:
- Nature Communications, 2023, v. 14, n. 1, p. 1, doi. 10.1038/s41467-023-43801-2
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- Article
Capturing coevolutionary signals in repeat proteins.
- Published in:
- BMC Bioinformatics, 2015, v. 16, n. 1, p. 1, doi. 10.1186/s12859-015-0648-3
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- Article
Capturing coevolutionary signals in repeat proteins
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- BMC Bioinformatics, 2015, v. 16, n. 1, p. 1, doi. 10.1186/s12859-015-0648-3
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- Article
Structural and Energetic Characterization of the Ankyrin Repeat Protein Family.
- Published in:
- PLoS Computational Biology, 2015, v. 11, n. 12, p. 1, doi. 10.1371/journal.pcbi.1004659
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- Article
The Upside of Failure: How Regional Student Groups Learn from Their Mistakes.
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- PLoS Computational Biology, 2014, v. 10, n. 8, p. 1, doi. 10.1371/journal.pcbi.1003768
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- Article
Repeat proteins challenge the concept of structural domains.
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- Biochemical Society Transactions, 2015, v. 43, n. 5, p. 844, doi. 10.1042/BST20150083
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- Article
Inferring repeat-protein energetics from evolutionary information.
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- PLoS Computational Biology, 2017, v. 13, n. 6, p. 1, doi. 10.1371/journal.pcbi.1005584
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- Article
Frustraevo: a web server to localize and quantify the conservation of local energetic frustration in protein families.
- Published in:
- Nucleic Acids Research, 2024, v. 52, n. W1, p. W233, doi. 10.1093/nar/gkae244
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- Publication type:
- Article
Reconstructing complex lineage trees from scRNA-seq data using MERLoT.
- Published in:
- Nucleic Acids Research, 2019, v. 47, n. 17, p. 8961, doi. 10.1093/nar/gkz706
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- Article
Reflections on a journey: a retrospective of the ISCB Student Council symposium series.
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- BMC Bioinformatics, 2018, v. 19, p. 1, doi. 10.1186/s12859-018-2369-x
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- Article
Resolving the fine structure in the energy landscapes of repeat proteins.
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- QRB Discovery, 2022, v. 3, p. 1, doi. 10.1017/qrd.2022.4
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- Article
PROSSTT: probabilistic simulation of single-cell RNA-seq data for complex differentiation processes.
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- Bioinformatics, 2019, v. 35, n. 18, p. 3517, doi. 10.1093/bioinformatics/btz078
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- Publication type:
- Article
INSECT 2.0: a web-server for genome-wide cis-regulatory modules prediction.
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- Bioinformatics, 2016, v. 32, n. 8, p. 1229, doi. 10.1093/bioinformatics/btv726
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- Publication type:
- Article
INSECT: IN-silico SEarch for Co-occurring Transcription factors.
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- Bioinformatics, 2013, v. 29, n. 22, p. 2852, doi. 10.1093/bioinformatics/btt506
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- Article
A contact‐based analysis of local energetic frustration dynamics identifies key residues enabling RfaH fold‐switch.
- Published in:
- Protein Science: A Publication of the Protein Society, 2024, v. 33, n. 10, p. 1, doi. 10.1002/pro.5182
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- Article