Works by Pan, Chongle
1
- PLoS Biology, 2013, v. 11, n. 8, p. 1, doi. 10.1371/journal.pbio.1001637
- McNulty, Nathan P.;
- Wu, Meng;
- Erickson, Alison R.;
- Pan, Chongle;
- Erickson, Brian K.;
- Martens, Eric C.;
- Pudlo, Nicholas A.;
- Muegge, Brian D.;
- Henrissat, Bernard;
- Hettich, Robert L.;
- Gordon, Jeffrey I.
- Article
2
- NPJ Biofilms & Microbiomes, 2024, v. 10, n. 1, p. 1, doi. 10.1038/s41522-024-00525-5
- Wang, Dongyu;
- Candry, Pieter;
- Hunt, Kristopher A.;
- Flinkstrom, Zachary;
- Shi, Zheng;
- Liu, Yunlong;
- Wofford, Neil Q.;
- McInerney, Michael J.;
- Tanner, Ralph S.;
- De Leόn, Kara B.;
- Zhou, Jizhong;
- Winkler, Mari-Karoliina H.;
- Stahl, David A.;
- Pan, Chongle
- Article
3
- Standards in Genomic Sciences, 2016, v. 11, p. 1, doi. 10.1186/s40793-016-0162-x
- Kappler, Ulrike;
- Davenport, Karen;
- Beatson, Scott;
- Lapidus, Alla;
- Pan, Chongle;
- Han, Cliff;
- del Carmen Montero-Calasanz, Maria;
- Land, Miriam;
- Hauser, Loren;
- Rohde, Manfred;
- Göker, Markus;
- Ivanova, Natalia;
- Woyke, Tanja;
- Klenk, Hans-Peter;
- Kyrpides, Nikos C.
- Article
4
- Frontiers in Plant Science, 2021, v. 12, p. 1, doi. 10.3389/fpls.2021.640930
- Saha, Prasenjit;
- Lin, Fan;
- Thibivilliers, Sandra;
- Xiong, Yi;
- Pan, Chongle;
- Bartley, Laura E.
- Article
5
- Genome Biology & Evolution, 2021, v. 13, n. 9, p. 1, doi. 10.1093/gbe/evab198
- Yates, Timothy B;
- Feng, Kai;
- Zhang, Jin;
- Singan, Vasanth;
- Jawdy, Sara S;
- Ranjan, Priya;
- Abraham, Paul E;
- Barry, Kerrie;
- Lipzen, Anna;
- Pan, Chongle;
- Schmutz, Jeremy;
- Chen, Jin-Gui;
- Tuskan, Gerald A;
- Muchero, Wellington
- Article
6
- BMC Evolutionary Biology, 2014, v. 14, n. 1, p. 2, doi. 10.1186/s12862-014-0207-y
- Juanjuan Chai;
- Kora, Guruprasad;
- Ahn, Tae-Hyuk;
- Hyatt, Doug;
- Pan, Chongle
- Article
7
- Plant Journal, 2024, v. 120, n. 6, p. 2668, doi. 10.1111/tpj.17136
- Xie, Meng;
- Tadesse, Dimiru;
- Zhang, Jin;
- Yao, Tao;
- Zhang, Li;
- Jawdy, Sara S.;
- Devireddy, Amith;
- Zheng, Kaijie;
- Smith, Emily B.;
- Morrell‐Falvey, Jennifer;
- Pan, Chongle;
- Chen, Feng;
- Tuskan, Gerald A.;
- Muchero, Wellington;
- Chen, Jin‐Gui
- Article
8
- Journal of Biophotonics, 2024, v. 17, n. 2, p. 1, doi. 10.1002/jbio.202300330
- Wang, Chen;
- Liu, Yunlong;
- Calle, Paul;
- Li, Xinwei;
- Liu, Ronghao;
- Zhang, Qinghao;
- Yan, Feng;
- Fung, Kar‐ming;
- Conner, Andrew K.;
- Chen, Sixia;
- Pan, Chongle;
- Tang, Qinggong
- Article
9
- Journal of Biophotonics, 2022, v. 15, n. 5, p. 1, doi. 10.1002/jbio.202270011
- Wang, Chen;
- Reynolds, Justin C.;
- Calle, Paul;
- Ladymon, Avery D.;
- Yan, Feng;
- Yan, Yuyang;
- Ton, Sam;
- Fung, Kar‐ming;
- Patel, Sanjay G.;
- Yu, Zhongxin;
- Pan, Chongle;
- Tang, Qinggong
- Article
10
- Journal of Biophotonics, 2022, v. 15, n. 5, p. 1, doi. 10.1002/jbio.202100347
- Wang, Chen;
- Reynolds, Justin C.;
- Calle, Paul;
- Ladymon, Avery D.;
- Yan, Feng;
- Yan, Yuyang;
- Ton, Sam;
- Fung, Kar‐ming;
- Patel, Sanjay G.;
- Yu, Zhongxin;
- Pan, Chongle;
- Tang, Qinggong
- Article
11
- ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2011, v. 5, n. 7, p. 1152, doi. 10.1038/ismej.2010.200
- Belnap, Christopher P;
- Pan, Chongle;
- Denef, Vincent J;
- Samatova, Nagiza F;
- Hettich, Robert L;
- Banfield, Jillian F
- Article
12
- ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2010, v. 4, n. 4, p. 520, doi. 10.1038/ismej.2009.139
- Belnap, Christopher P.;
- Pan, Chongle;
- VerBerkmoes, Nathan C.;
- Power, Mary E.;
- Samatova, Nagiza F.;
- Carver, Rudolf L.;
- Hettich, Robert L.;
- Banfield, Jillian F.
- Article
13
- Frontiers in Microbiology, 2016, p. 1, doi. 10.3389/fmicb.2016.00563
- Marlow, Jeffrey J.;
- Skennerton, Connor T.;
- Orphan, Victoria J.;
- Zhou Li;
- Chourey, Karuna;
- Hettich, Robert L.;
- Chongle Pan
- Article
14
- Frontiers in Microbiology, 2016, p. 1, doi. 10.3389/fmicb.2016.00238
- Mosier, Annika C.;
- Miller, Christopher S.;
- Frischkorn, Kyle R.;
- Banfield, Jillian F.;
- Ohm, Robin A.;
- LaButti, Kurt;
- Lipzen, Anna;
- Chen, Cindy;
- Johnson, Jenifer;
- Lindquist, Erika A.;
- Grigoriev, Igor V.;
- Lapidus, Alla;
- Pan, Chongle;
- Hettich, Robert L.;
- Zhou Li;
- Singer, Steven W.
- Article
15
- Frontiers in Microbiology, 2018, p. N.PAG, doi. 10.3389/fmicb.2018.01282
- Kieft, Brandon;
- Li, Zhou;
- Bryson, Samuel;
- Crump, Byron C.;
- Hettich, Robert;
- Pan, Chongle;
- Mayali, Xavier;
- Mueller, Ryan S.
- Article
16
- Bioinformatics, 2013, v. 29, n. 16, p. 2064, doi. 10.1093/bioinformatics/btt329
- Wang, Yingfeng;
- Ahn, Tae-Hyuk;
- Li, Zhou;
- Pan, Chongle
- Article
17
- Bioinformatics, 2012, v. 28, n. 14, p. 1895, doi. 10.1093/bioinformatics/bts274
- Article
18
- Bioinformatics, 2005, v. 21, n. 5, p. 563, doi. 10.1093/bioinformatics/bti044
- Article
19
- Scientific Reports, 2022, v. 12, n. 1, p. 1, doi. 10.1038/s41598-022-12950-7
- Wang, Chen;
- Calle, Paul;
- Reynolds, Justin C.;
- Ton, Sam;
- Yan, Feng;
- Donaldson, Anthony M.;
- Ladymon, Avery D.;
- Roberts, Pamela R.;
- de Armendi, Alberto J.;
- Fung, Kar-ming;
- Shettar, Shashank S.;
- Pan, Chongle;
- Tang, Qinggong
- Article
20
- Frontiers in Microbiology, 2014, v. 5, p. 1, doi. 10.3389/fmicb.2014.00246
- Shihui Yang;
- Chongle Pan;
- Hurst, Gregory B.;
- Dice, Lezlee;
- Davison, Brian H.;
- Brown, Steven D.
- Article
21
- Environmental Microbiology, 2017, v. 19, n. 3, p. 1041, doi. 10.1111/1462-2920.13605
- Li, Zhou;
- Yao, Qiuming;
- Dearth, Stephen P.;
- Entler, Matthew R.;
- Castro Gonzalez, Hector F.;
- Uehling, Jessie K.;
- Vilgalys, Rytas J.;
- Hurst, Gregory B.;
- Campagna, Shawn R.;
- Labbé, Jessy L.;
- Pan, Chongle
- Article
22
- Environmental Microbiology, 2014, v. 16, n. 10, p. 3224, doi. 10.1111/1462-2920.12488
- Justice, Nicholas B.;
- Li, Zhou;
- Wang, Yingfeng;
- Spaudling, Susan E.;
- Mosier, Annika C.;
- Hettich, Robert L.;
- Pan, Chongle;
- Banfield, Jillian F.
- Article
23
- Environmental Microbiology, 2014, v. 16, n. 6, p. 1592, doi. 10.1111/1462-2920.12314
- Glass, Jennifer B.;
- Yu, Hang;
- Steele, Joshua A.;
- Dawson, Katherine S.;
- Sun, Shulei;
- Chourey, Karuna;
- Pan, Chongle;
- Hettich, Robert L.;
- Orphan, Victoria J.
- Article
24
- Environmental Microbiology, 2011, v. 13, n. 8, p. 2279, doi. 10.1111/j.1462-2920.2011.02486.x
- Mueller, Ryan S.;
- Dill, Brian D.;
- Pan, Chongle;
- Belnap, Christopher P.;
- Thomas, Brian C.;
- VerBerkmoes, Nathan C.;
- Hettich, Robert L.;
- Banfield, Jillian F.
- Article
25
- BMC Bioinformatics, 2010, v. 11, p. 118, doi. 10.1186/1471-2105-11-118
- Chongle Pan;
- Park, Byung H.;
- McDonald, William H.;
- Carey, Patricia A.;
- Banfield, Jillian F.;
- VerBerkmoes, Nathan C.;
- Hettich, Robert L.;
- Samatova, Nagiza F.
- Article
26
- Proteomics, 2015, v. 15, n. 20, p. 3463, doi. 10.1002/pmic.201400563
- Young, Jacque C.;
- Pan, Chongle;
- Adams, Rachel M.;
- Brooks, Brandon;
- Banfield, Jillian F.;
- Morowitz, Michael J.;
- Hettich, Robert L.
- Article
27
- Proteomics, 2015, v. 15, n. 20, p. 3424, doi. 10.1002/pmic.201400571
- Xiong, Weili;
- Abraham, Paul E.;
- Li, Zhou;
- Pan, Chongle;
- Hettich, Robert L.
- Article
28
- Bioinformatics, 2018, v. 34, n. 5, p. 795, doi. 10.1093/bioinformatics/btx601
- Guo, Xuan;
- Li, Zhou;
- Yao, Qiuming;
- Mueller, Ryan S;
- Eng, Jimmy K;
- Tabb, David L;
- Hervey, William Judson;
- Pan, Chongle
- Article
29
- Bioinformatics, 2015, v. 31, n. 2, p. 170, doi. 10.1093/bioinformatics/btu641
- Ahn, Tae-Hyuk;
- Chai, Juanjuan;
- Pan, Chongle
- Article
30
- Bioinformatics, 2014, v. 30, n. 19, p. 2717, doi. 10.1093/bioinformatics/btu395
- Haider, Bahlul;
- Ahn, Tae-Hyuk;
- Bushnell, Brian;
- Chai, Juanjuan;
- Copeland, Alex;
- Pan, Chongle
- Article
31
- Microbiome, 2025, v. 13, n. 1, p. 1, doi. 10.1186/s40168-025-02105-x
- Fan, Yupeng;
- Wang, Dongyu;
- Yang, Joy X.;
- Ning, Daliang;
- He, Zhili;
- Zhang, Ping;
- Rocha, Andrea M.;
- Xiao, Naijia;
- Michael, Jonathan P.;
- Walker, Katie F.;
- Joyner, Dominique C.;
- Pan, Chongle;
- Adams, Michael W. W.;
- Fields, Matthew W.;
- Alm, Eric J.;
- Stahl, David A.;
- Hazen, Terry C.;
- Adams, Paul D.;
- Arkin, Adam P.;
- Zhou, Jizhong
- Article
32
- Microbiome, 2024, v. 12, n. 1, p. 1, doi. 10.1186/s40168-024-01866-1
- Xiong, Yi;
- Mueller, Ryan S.;
- Feng, Shichao;
- Guo, Xuan;
- Pan, Chongle
- Article
33
- Frontiers in Microbiology, 2019, v. 10, p. 1, doi. 10.3389/fmicb.2019.02706
- Li, Zhou;
- Yao, Qiuming;
- Guo, Xuan;
- Crits-Christoph, Alexander;
- Mayes, Melanie A.;
- IV, William Judson Hervey;
- Lebeis, Sarah L.;
- Banfield, Jillian F.;
- Hurst, Gregory B.;
- Hettich, Robert L.;
- Pan, Chongle
- Article
34
- Nature Communications, 2014, v. 5, n. 7, p. 4405, doi. 10.1038/ncomms5405
- Li, Zhou;
- Wang, Yingfeng;
- Yao, Qiuming;
- Justice, Nicholas B.;
- Ahn, Tae-Hyuk;
- Xu, Dong;
- Hettich, Robert L.;
- Banfield, Jillian F.;
- Pan, Chongle
- Article
35
- Bioinformatics Advances, 2024, v. 4, n. 1, p. 1, doi. 10.1093/bioadv/vbae024
- Li, Jiancheng;
- Xiong, Yi;
- Feng, Shichao;
- Pan, Chongle;
- Guo, Xuan
- Article
36
- PLoS ONE, 2013, v. 8, n. 7, p. 1, doi. 10.1371/journal.pone.0068886
- Yang, Shihui;
- Pan, Chongle;
- Tschaplinski, Timothy J.;
- Hurst, Gregory B.;
- Engle, Nancy L.;
- Zhou, Wen;
- Dam, PhuongAn;
- Xu, Ying;
- Rodriguez Jr, Miguel;
- Dice, Lezlee;
- Johnson, Courtney M.;
- Davison, Brian H.;
- Brown, Steven D.
- Article
37
- PLoS ONE, 2012, v. 7, n. 11, p. 1, doi. 10.1371/journal.pone.0049138
- Erickson, Alison R.;
- Cantarel, Brandi L.;
- Lamendella, Regina;
- Darzi, Youssef;
- Mongodin, Emmanuel F.;
- Pan, Chongle;
- Shah, Manesh;
- Halfvarson, Jonas;
- Tysk, Curt;
- Henrissat, Bernard;
- Raes, Jeroen;
- Verberkmoes, Nathan C.;
- Fraser, Claire M.;
- Hettich, Robert L.;
- Jansson, Janet K.
- Article
38
- PLoS ONE, 2012, v. 7, n. 5, p. 1, doi. 10.1371/journal.pone.0038077
- Young, Jacque C.;
- Dill, Brian D.;
- Chongle Pan;
- Hettich, Robert L.;
- Banfield, Jillian F.;
- Shah, Manesh;
- Fremaux, Christophe;
- Horvath, Philippe;
- Barrangou, Rodolphe;
- VerBerkmoes, Nathan C.
- Article
39
- PLoS ONE, 2011, v. 6, n. 12, p. 1, doi. 10.1371/journal.pone.0028827
- Article
40
- PLoS ONE, 2011, v. 6, n. 11, p. 1, doi. 10.1371/journal.pone.0027173
- Cantarel, Brandi L.;
- Erickson, Alison R.;
- VerBerkmoes, Nathan C.;
- Erickson, Brian K.;
- Carey, Patricia A.;
- Pan, Chongle;
- Shah, Manesh;
- Mongodin, Emmanuel F.;
- Jansson, Janet K.;
- Fraser-Liggett, Claire M.;
- Hettich, Robert L.
- Article
41
- PLoS ONE, 2009, v. 4, n. 4, p. 1, doi. 10.1371/journal.pone.0005271
- Raman, Babu;
- Pan, Chongle;
- Hurst, Gregory B.;
- Rodriguez Jr., Miguel;
- McKeown, Catherine K.;
- Lankford, Patricia K.;
- Samatova, Nagiza F.;
- Mielenz, Jonathan R.
- Article
42
- PLoS ONE, 2009, v. 4, n. 2, p. 1, doi. 10.1371/journal.pone.0004615
- Karpinets, Tatiana V.;
- Pelletier, Dale A.;
- Chongle Pan;
- Uberbacher, Edward C.;
- Melnichenko, Galina V.;
- Hettich, Robert L.;
- Samatova, Nagiza F.
- Article
43
- Nature Communications, 2022, v. 13, n. 1, p. 1, doi. 10.1038/s41467-022-31227-1
- Zhang, Li;
- Jonscher, Karen R.;
- Zhang, Zuyuan;
- Xiong, Yi;
- Mueller, Ryan S.;
- Friedman, Jacob E.;
- Pan, Chongle
- Article
44
- 2009
- Shihui Yang;
- Pappas, Katherine M;
- Hauser, Loren J;
- Land, Miriam L;
- Gwo-Liang Chen;
- Hurst, Gregory B;
- Pan, Chongle;
- Kouvelis, Vassili N;
- Typas, Milton A;
- Pelletier, Dale A;
- Klingeman, Dawn M;
- Yun-Juan Chang;
- Samatova, Nagiza F;
- Brown, Steven D
- Letter
45
- PLoS Computational Biology, 2023, v. 19, n. 7, p. 1, doi. 10.1371/journal.pcbi.1011211
- Badré, Adrien;
- Pan, Chongle
- Article
46
- Human Genomics, 2019, v. 13, p. N.PAG, doi. 10.1186/s40246-019-0227-1
- Paul, Alexander J.;
- Lawrence, Dylan;
- Song, Myoungkyu;
- Lim, Seung-Hwan;
- Pan, Chongle;
- Ahn, Tae-Hyuk
- Article
47
- PLoS ONE, 2024, v. 19, n. 10, p. 1, doi. 10.1371/journal.pone.0311510
- Ghosh, Satanu;
- Abushukair, Hassan Mohammed;
- Ganesan, Arjun;
- Pan, Chongle;
- Naqash, Abdul Rafeh;
- Lu, Kun
- Article
48
- ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2023, v. 17, n. 6, p. 823, doi. 10.1038/s41396-023-01392-2
- Xu, Tao;
- Tao, Xuanyu;
- He, Hongxi;
- Kempher, Megan L.;
- Zhang, Siping;
- Liu, Xiaochun;
- Wang, Jun;
- Wang, Dongyu;
- Ning, Daliang;
- Pan, Chongle;
- Ge, Honghua;
- Zhang, Nannan;
- He, Yong-Xing;
- Zhou, Jizhong
- Article
49
- ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2017, v. 11, n. 12, p. 2781, doi. 10.1038/ismej.2017.128
- Bryson, Samuel;
- Li, Zhou;
- Chavez, Francisco;
- Weber, Peter K;
- Pett-Ridge, Jennifer;
- Hettich, Robert L;
- Pan, Chongle;
- Mayali, Xavier;
- Mueller, Ryan S
- Article
50
- ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2015, v. 9, n. 1, p. 180, doi. 10.1038/ismej.2014.113
- Mosier, Annika C;
- Li, Zhou;
- Thomas, Brian C;
- Hettich, Robert L;
- Pan, Chongle;
- Banfield, Jillian F
- Article