Works by Paananen, Jussi

Results: 43

Determinants of Cardiorespiratory Fitness in a Population Sample of Girls and Boys Aged 6 to 8 Years.

Published in:

Journal of Physical Activity & Health, 2016, v. 13, n. 11, p. 1149, doi. 10.1123/jpah.2015-0644

By:

Lintu, Niina;
Savonen, Kai;
Viitasalo, Anna;
Tompuri, Tuomo;
Paananen, Jussi;
Tarvainen, Mika P.;
Lakka, Timo

Publication type:

Article

Kuopio birth cohort - design of a Finnish joint research effort for identification of environmental and lifestyle risk factors for the wellbeing of the mother and the newborn child.

Published in:

2018

By:

Huuskonen, Pasi;
Keski-Nisula, Leea;
Heinonen, Seppo;
Voutilainen, Sari;
Tuomainen, Tomi-Pekka;
Pekkanen, Juha;
Lampi, Jussi;
Lehto, Soili M;
Haaparanta, Hannariikka;
Elomaa, Antti-Pekka;
Voutilainen, Raimo;
Backman, Katri;
Kokki, Hannu;
Kumpulainen, Kirsti;
Paananen, Jussi;
Vähäkangas, Kirsi;
Pasanen, Markku

Publication type:

journal article

ThETA: transcriptome-driven efficacy estimates for gene-based TArget discovery.

Published in:

Bioinformatics, 2020, v. 36, n. 14, p. 4214, doi. 10.1093/bioinformatics/btaa518

By:

Failli, Mario;
Paananen, Jussi;
Fortino, Vittorio

Publication type:

Article

Identification of the UBP1 Locus as a Critical Blood Pressure Determinant Using a Combination of Mouse and Human Genetics.

Published in:

PLoS Genetics, 2009, v. 5, n. 8, p. 1, doi. 10.1371/journal.pgen.1000591

By:

Koutnikova, Hana;
Laakso, Markku;
Lu Lu;
Combe, Roy;
Paananen, Jussi;
Kuulasmaa, Teemu;
Kuusisto, Johanna;
Häring, Hans-Ulrich;
Hansen, Torben;
Pedersen, Oluf;
Smith, Ulf;
Hanefeld, Markolf;
Williams, Robert W.;
Auwerx, Johan

Publication type:

Article

Identification and validation of N-acetyltransferase 2 as an insulin sensitivity gene.

Published in:

2016

By:

Knowles, Joshua W;
Xie, Weijia;
Zhang, Zhongyang;
Chennamsetty, Indumathi;
Assimes, Themistocles L;
Paananen, Jussi;
Hansson, Ola;
Pankow, James;
Goodarzi, Mark O;
Carcamo-Orive, Ivan;
Morris, Andrew P;
Chen, Yii-Der I;
Mäkinen, Ville-Petteri;
Ganna, Andrea;
Mahajan, Anubha;
Guo, Xiuqing;
Abbasi, Fahim;
Greenawalt, Danielle M;
Lum, Pek;
Molony, Cliona

Publication type:

corrected article

Identification and validation of N-acetyltransferase 2 as an insulin sensitivity gene.

Published in:

Journal of Clinical Investigation, 2015, v. 125, n. 4, p. 1739, doi. 10.1172/JCI74692

By:

Knowles, Joshua W.;
Weijia Xie;
Zhongyang Zhang;
Chennemsetty, Indumathi;
Assimes, Themistocles L.;
Paananen, Jussi;
Hansson, Ola;
Pankow, James;
Goodarzi, Mark O.;
Carcamo-Orive, Ivan;
Morris, Andrew P.;
Chen, Yii-Der I.;
Mäkinen, Ville-Petteri;
Ganna, Andrea;
Mahajan, Anubha;
Xiuqing Guo;
Abbasi, Fahim;
Greenawalt, Danielle M.;
Pek Lum;
Molony, Cliona

Publication type:

Article

Active eukaryotes in drinking water distribution systems of ground and surface waterworks.

Published in:

Microbiome, 2019, v. 7, n. 1, p. N.PAG, doi. 10.1186/s40168-019-0715-5

By:

Inkinen, Jenni;
Jayaprakash, Balamuralikrishna;
Siponen, Sallamaari;
Hokajärvi, Anna-Maria;
Pursiainen, Anna;
Ikonen, Jenni;
Ryzhikov, Ivan;
Täubel, Martin;
Kauppinen, Ari;
Paananen, Jussi;
Miettinen, Ilkka T.;
Torvinen, Eila;
Kolehmainen, Mikko;
Pitkänen, Tarja

Publication type:

Article

"Notame": Workflow for Non-Targeted LC–MS Metabolic Profiling.

Published in:

Metabolites (2218-1989), 2020, v. 10, n. 4, p. 135, doi. 10.3390/metabo10040135

By:

Klåvus, Anton;
Kokla, Marietta;
Noerman, Stefania;
Koistinen, Ville M.;
Tuomainen, Marjo;
Zarei, Iman;
Meuronen, Topi;
Häkkinen, Merja R.;
Rummukainen, Soile;
Farizah Babu, Ambrin;
Sallinen, Taisa;
Kärkkäinen, Olli;
Paananen, Jussi;
Broadhurst, David;
Brunius, Carl;
Hanhineva, Kati

Publication type:

Article

In Vitro and In Vivo Pipeline for Validation of Disease-Modifying Effects of Systems Biology-Derived Network Treatments for Traumatic Brain Injury—Lessons Learned.

Published in:

International Journal of Molecular Sciences, 2019, v. 20, n. 21, p. 5395, doi. 10.3390/ijms20215395

By:

Lipponen, Anssi;
Natunen, Teemu;
Hujo, Mika;
Ciszek, Robert;
Hämäläinen, Elina;
Tohka, Jussi;
Hiltunen, Mikko;
Paananen, Jussi;
Poulsen, David;
Kansanen, Emilia;
Ekolle Ndode-Ekane, Xavier;
Levonen, Anna-Liisa;
Pitkänen, Asla

Publication type:

Article

Random forest-based imputation outperforms other methods for imputing LC-MS metabolomics data: a comparative study.

Published in:

BMC Bioinformatics, 2019, v. 20, n. 1, p. N.PAG, doi. 10.1186/s12859-019-3110-0

By:

Kokla, Marietta;
Virtanen, Jyrki;
Kolehmainen, Marjukka;
Paananen, Jussi;
Hanhineva, Kati

Publication type:

Article

Transcription factors <italic>Tp73</italic>, <italic>Cebpd</italic>, <italic>Pax6,</italic> and <italic>Spi1</italic> rather than DNA methylation regulate chronic transcriptomics changes after experimental traumatic brain injury.

Published in:

Acta Neuropathologica Communications, 2018, v. 6, p. 1, doi. 10.1186/s40478-018-0519-z

By:

Lipponen, Anssi;
El-Osta, Assam;
Kaspi, Antony;
Ziemann, Mark;
Khurana, Ishant;
KN, Harikrishnan;
Navarro-Ferrandis, Vicente;
Puhakka, Noora;
Paananen, Jussi;
Pitkänen, Asla

Publication type:

Article

An omics perspective on drug target discovery platforms.

Published in:

Briefings in Bioinformatics, 2020, v. 21, n. 6, p. 1937, doi. 10.1093/bib/bbz122

By:

Paananen, Jussi;
Fortino, Vittorio

Publication type:

Article

GRINL1A Complex Transcription Unit Containing GCOM1, MYZAP, and POLR2M Genes Associates with Fully Penetrant Recessive Dilated Cardiomyopathy.

Published in:

Frontiers in Genetics, 2021, v. 12, p. 1, doi. 10.3389/fgene.2021.786705

By:

Heliö, Krista;
Mäyränpää, Mikko I.;
Saarinen, Inka;
Ahonen, Saija;
Junnila, Heidi;
Tommiska, Johanna;
Weckström, Sini;
Holmström, Miia;
Toivonen, Mia;
Nikus, Kjell;
Hathaway, Julie;
Siivonen, Pauli;
Muona, Mikko;
Sistonen, Johanna;
Salmenperä, Pertteli;
Gentile, Massimiliano;
Paananen, Jussi;
Myllykangas, Samuel;
Alastalo, Tero-Pekka;
Heliö, Tiina

Publication type:

Article

Diagnostic yield of genetic testing in a heterogeneous cohort of 1376 HCM patients.

Published in:

2021

By:

Hathaway, Julie;
Heliö, Krista;
Saarinen, Inka;
Tallila, Jonna;
Seppälä, Eija H;
Tuupanen, Sari;
Turpeinen, Hannu;
Kangas-Kontio, Tiia;
Schleit, Jennifer;
Tommiska, Johanna;
Kytölä, Ville;
Valori, Miko;
Muona, Mikko;
Sistonen, Johanna;
Gentile, Massimiliano;
Salmenperä, Pertteli;
Myllykangas, Samuel;
Paananen, Jussi;
Alastalo, Tero-Pekka;
Heliö, Tiina

Publication type:

journal article

Screening approach for identifying candidate drugs and drug-drug interactions related to hip fracture risk in persons with Alzheimer disease.

Published in:

Pharmacoepidemiology & Drug Safety, 2017, v. 26, n. 8, p. 875, doi. 10.1002/pds.4232

By:

Tolppanen, Anna‐Maija;
Taipale, Heidi;
Koponen, Marjaana;
Tanskanen, Antti;
Lavikainen, Piia;
Paananen, Jussi;
Tiihonen, Jari;
Hartikainen, Sirpa

Publication type:

Article

Varanto: variant enrichment analysis and annotation.

Published in:

Bioinformatics, 2019, v. 35, n. 17, p. 3154, doi. 10.1093/bioinformatics/btz046

By:

Timonen, Oskari;
Särkkä, Mikko;
Fülöp, Tibor;
Mattsson, Anton;
Kekäläinen, Juha;
Paananen, Jussi

Publication type:

Article

Publisher Correction: Prioritizing target-disease associations with novel safety and efficacy scoring methods.

Published in:

2020

By:

Failli, Mario;
Paananen, Jussi;
Fortino, Vittorio

Publication type:

Correction Notice

Prioritizing target-disease associations with novel safety and efficacy scoring methods.

Published in:

Scientific Reports, 2019, v. 9, n. 1, p. N.PAG, doi. 10.1038/s41598-019-46293-7

By:

Failli, Mario;
Paananen, Jussi;
Fortino, Vittorio

Publication type:

Article

The Contribution of Staffing to Medication Administration Errors: A Text Mining Analysis of Incident Report Data.

Published in:

Journal of Nursing Scholarship, 2020, v. 52, n. 1, p. 113, doi. 10.1111/jnu.12531

By:

Härkänen, Marja;
Vehviläinen‐Julkunen, Katri;
Murrells, Trevor;
Paananen, Jussi;
Franklin, Bryony D.;
Rafferty, Anne M.

Publication type:

Article

Reduction in cardiometabolic risk factors by a multifunctional diet is mediated via several branches of metabolism as evidenced by nontargeted metabolite profiling approach.

Published in:

Molecular Nutrition & Food Research, 2017, v. 61, n. 2, p. n/a, doi. 10.1002/mnfr.201600552

By:

Tovar, Juscelino;
Mello, Vanessa D.;
Nilsson, Anne;
Johansson, Maria;
Paananen, Jussi;
Lehtonen, Marko;
Hanhineva, Kati;
Björck, Inger

Publication type:

Article

FORG3D: Force-directed 3D graph editor for visualization of integrated genome scale data.

Published in:

BMC Systems Biology, 2009, v. 3, p. 1, doi. 10.1186/1752-0509-3-26

By:

Paananen, Jussi;
Wong, Garry

Publication type:

Article

The activation of hepatic and muscle polyamine catabolism improves glucose homeostasis.

Published in:

Amino Acids, 2012, v. 42, n. 2/3, p. 427, doi. 10.1007/s00726-011-1013-0

By:

Koponen, Taina;
Cerrada-Gimenez, Marc;
Pirinen, Eija;
Hohtola, Esa;
Paananen, Jussi;
Vuohelainen, Susanna;
Tusa, Maija;
Pirnes-Karhu, Sini;
Heikkinen, Sami;
Virkamäki, Antti;
Uimari, Anne;
Alhonen, Leena;
Laakso, Markku

Publication type:

Article

TAFFEL: Independent Enrichment Analysis of gene sets.

Published in:

BMC Bioinformatics, 2011, v. 12, n. 1, p. 171, doi. 10.1186/1471-2105-12-171

By:

Kurki, Mitja I.;
Paananen, Jussi;
Storvik, Markus;
Ylä-Herttuala, Seppo;
Jääskeläinen, Juha E.;
von und zu Fraunberg, Mikael;
Garry Wong;
Pehkonen, Petri

Publication type:

Article

CROPPER: a metagene creator resource for cross-platform and cross-species compendium studies.

Published in:

BMC Bioinformatics, 2006, v. 7, p. 418, doi. 10.1186/1471-2105-7-418

By:

Paananen, Jussi;
Storvik, Markus;
Wong, Garry

Publication type:

Article

Healthy Nordic Diet Modulates the Expression of Genes Related to Mitochondrial Function and Immune Response in Peripheral Blood Mononuclear Cells from Subjects with Metabolic Syndrome–A SYSDIET Sub‐Study.

Published in:

Molecular Nutrition & Food Research, 2019, v. 63, n. 13, p. N.PAG, doi. 10.1002/mnfr.201801405

By:

Myhrstad, Mari C. W.;
Mello, Vanessa D.;
Dahlman, Ingrid;
Kolehmainen, Marjukka;
Paananen, Jussi;
Rundblad, Amanda;
Carlberg, Carsten;
Olstad, Ole Kristoffer;
Pihlajamäki, Jussi;
Holven, Kirsten B.;
Hermansen, Kjeld;
Dragsted, Lars O.;
Gunnarsdottir, Ingibjörg;
Cloetens, Lieselotte;
Storm, Matilda Ulmius;
Åkesson, Björn;
Rosqvist, Fredrik;
Hukkanen, Janne;
Herzig, Karl‐Heinz;
Risérus, Ulf

Publication type:

Article

Metabolic Profiling of High Egg Consumption and the Associated Lower Risk of Type 2 Diabetes in Middle‐Aged Finnish Men.

Published in:

Molecular Nutrition & Food Research, 2019, v. 63, n. 5, p. N.PAG, doi. 10.1002/mnfr.201800605

By:

Noerman, Stefania;
Kärkkäinen, Olli;
Mattsson, Anton;
Paananen, Jussi;
Lehtonen, Marko;
Nurmi, Tarja;
Tuomainen, Tomi‐Pekka;
Voutilainen, Sari;
Hanhineva, Kati;
Virtanen, Jyrki K

Publication type:

Article

Decreased plasma β-amyloid in the Alzheimer's disease APP A673T variant carriers.

Published in:

2017

By:

Martiskainen, Henna;
Herukka, Sanna‐Kaisa;
Stančáková, Alena;
Paananen, Jussi;
Soininen, Hilkka;
Kuusisto, Johanna;
Laakso, Markku;
Hiltunen, Mikko

Publication type:

journal article

A Genome-Wide Association Study of IVGTT-Based Measures of First-Phase Insulin Secretion Refines the Underlying Physiology of Type 2 Diabetes Variants.

Published in:

2017

By:

Wood, Andrew R.;
Jonsson, Anna;
Jackson, Anne U.;
Nan Wang;
van Leewen, Nienke;
Palmer, Nicholette D.;
Sayuko Kobes;
Deelen, Joris;
Boquete-Vilarino, Lorena;
Paananen, Jussi;
Stanáčková, Alena;
Boomsma, Dorret I.;
de Geus, Eco J. C.;
Eekhoff, Elisabeth M. W.;
Fritsche, Andreas;
Kramer, Mark;
Nijpels, Giel;
Simonis-Bik, Annemarie;
van Haeften, Timon W.;
Mahajan, Anubha

Publication type:

journal article

Association of Ketone Body Levels With Hyperglycemia and Type 2 Diabetes in 9,398 Finnish Men.

Published in:

Diabetes, 2013, v. 62, n. 10, p. 3618, doi. 10.2337/db12-1363

By:

Mahendran, Yuvaraj;
Vangipurapu, Jagadish;
Cederberg, Henna;
Stancáková, Alena;
Pihlajamäki, Jussi;
Soininen, Pasi;
Kangas, Antti J.;
Paananen, Jussi;
Civelek, Mete;
Saleem, Niyas K.;
Pajukanta, Päivi;
Lusis, Aldons J.;
Bonnycastle, Lori L.;
Morken, Mario A.;
Collins, Francis S.;
Mohlke, Karen L.;
Boehnke, Michael;
Ala-Korpela, Mika;
Kuusisto, Johanna;
Laakso, Markku

Publication type:

Article

Genetic Variants Associated With Glycine Metabolism and Their Role in Insulin Sensitivity and Type 2 Diabetes.

Published in:

Diabetes, 2013, v. 62, n. 6, p. 2141, doi. 10.2337/db12-0876

By:

Weijia Xie;
Wood, Andrew R.;
Lyssenko, Valeriya;
Weedon, Michael N.;
Knowles, Joshua W.;
Alkayyali, Sami;
Assimes, Themistocles L.;
Quertermous, Thomas;
Abbasi, Fahim;
Paananen, Jussi;
Häring, Hans;
Hansen, Torben;
Pedersen, Oluf;
Smith, Ulf;
Laakso, Markku;
Dekker, Jacqueline M.;
Nolan, John J.;
Groop, Leif;
Ferrannini, Ele;
Adam, Klaus-Peter

Publication type:

Article

Hyperglycemia and a Common Variant of GCKR Are Associated With the Levels of Eight Amino Acids in 9,369 Finnish Men.

Published in:

Diabetes, 2012, v. 61, n. 7, p. 1895, doi. 10.2337/db11-1378

By:

Stančáková, Alena;
Civelek, Mete;
Saleem, Niyas K.;
Soininen, Pasi;
Kangas, Antti J.;
Cederberg, Henna;
Paananen, Jussi;
Pihlajamäki, Jussi;
Bonnycastle, Lori L.;
Morken, Mario A.;
Boehnke, Michael;
Pajukanta, Päivi;
Lusis, Aldons J.;
Collins, Francis S.;
Kuusisto, Johanna;
Ala-Korpela, Mika;
Laakso, Markku

Publication type:

Article

Effects of 34 Risk Loci for Type 2 Diabetes or Hyperglycemia on Lipoprotein Subclasses and Their Composition in 6,580 Nondiabetic Finnish Men.

Published in:

Diabetes, 2011, v. 60, n. 5, p. 1608, doi. 10.2337/db10-1655

By:

Stančáková, Alena;
Paananen, Jussi;
Soininen, Pasi;
Kangas, Antti J.;
Bonnycastle, Lori L.;
Morken, Mario A.;
Collins, Francis S.;
Jackson, Anne U.;
Boehnke, Michael L.;
Kuusisto, Johanna;
Ala-Korpela, Mika;
Laakso, Markku

Publication type:

Article

Association of 18 Confirmed Susceptibility Loci for Type 2 Diabetes With Indices of Insulin Release, Proinsulin Conversion, and Insulin Sensitivity in 5,327 Nondiabetic Finnish Men.

Published in:

Diabetes, 2009, v. 58, n. 9, p. 2129, doi. 10.2337/db09-0117

By:

Stančáková, Alena;
Kuulasmaa, Teemu;
Paananen, Jussi;
Jackson, Anne U.;
Bonnycastle, Lori L.;
Collins, Francis S.;
Boehnke, Michael;
Kuusisto, Johanna;
Laakso, Markku

Publication type:

Article

Digitally supported program for type 2 diabetes risk identification and risk reduction in real-world setting: protocol for the StopDia model and randomized controlled trial.

Published in:

2019

By:

Pihlajamäki, Jussi;
Männikkö, Reija;
Tilles-Tirkkonen, Tanja;
Karhunen, Leila;
Kolehmainen, Marjukka;
Schwab, Ursula;
Lintu, Niina;
Paananen, Jussi;
Järvenpää, Riia;
Harjumaa, Marja;
Martikainen, Janne;
Kohl, Johanna;
Poutanen, Kaisa;
Ermes, Miikka;
Absetz, Pilvikki;
Lindström, Jaana;
Lakka, Timo A.;
StopDia study group

Publication type:

journal article

Identifying risks areas related to medication administrations - text mining analysis using free-text descriptions of incident reports.

Published in:

2019

By:

Härkänen, Marja;
Paananen, Jussi;
Murrells, Trevor;
Rafferty, Anne Marie;
Franklin, Bryony Dean

Publication type:

journal article

Analysis of microarray studies performed in the neurosciences.

Published in:

Journal of Molecular Neuroscience, 2005, v. 27, n. 3, p. 261, doi. 10.1385/JMN:27:3:261

By:

Aarnio, Vuokko;
Paananen, Jussi;
Wong, Garry

Publication type:

Article

Varietas: a functional variation database portal.

Published in:

Database: The Journal of Biological Databases & Curation, 2010, v. 2010, p. 1, doi. 10.1093/database/baq016

By:

Paananen, Jussi;
Ciszek, Robert;
Wong, Garry

Publication type:

Article

Effects of Whole Grain, Fish and Bilberries on Serum Metabolic Profile and Lipid Transfer Protein Activities: A Randomized Trial (Sysdimet).

Published in:

PLoS ONE, 2014, v. 9, n. 2, p. 1, doi. 10.1371/journal.pone.0090352

By:

Lankinen, Maria;
Kolehmainen, Marjukka;
Jääskeläinen, Tiina;
Paananen, Jussi;
Joukamo, Laura;
Kangas, Antti J.;
Soininen, Pasi;
Poutanen, Kaisa;
Mykkänen, Hannu;
Gylling, Helena;
Orešič, Matej;
Jauhiainen, Matti;
Ala-Korpela, Mika;
Uusitupa, Matti;
Schwab, Ursula

Publication type:

Article

Non-Cholesterol Sterol Levels Predict Hyperglycemia and Conversion to Type 2 Diabetes in Finnish Men.

Published in:

PLoS ONE, 2013, v. 8, n. 6, p. 1, doi. 10.1371/journal.pone.0067406

By:

Cederberg, Henna;
Gylling, Helena;
Miettinen, Tatu A.;
Paananen, Jussi;
Vangipurapu, Jagadish;
Pihlajamäki, Jussi;
Kuulasmaa, Teemu;
Stančáková, Alena;
Smith, Ulf;
Kuusisto, Johanna;
Laakso, Markku

Publication type:

Article

Whole Grain Products, Fish and Bilberries Alter Glucose and Lipid Metabolism in a Randomized, Controlled Trial: The Sysdimet Study.

Published in:

PLoS ONE, 2011, v. 6, n. 8, p. 1, doi. 10.1371/journal.pone.0022646

By:

Lankinen, Maria;
Schwab, Ursula;
Kolehmainen, Marjukka;
Paananen, Jussi;
Poutanen, Kaisa;
Mykkänen, Hannu;
Seppänen-Laakso, Tuulikki;
Gylling, Helena;
Uusitupa, Matti;
Orešič, Matej

Publication type:

Article

Indolepropionic acid and novel lipid metabolites are associated with a lower risk of type 2 diabetes in the Finnish Diabetes Prevention Study.

Published in:

Scientific Reports, 2017, p. 46337, doi. 10.1038/srep46337

By:

de Mello, Vanessa D.;
Paananen, Jussi;
Lindström, Jaana;
Lankinen, Maria A.;
Shi, Lin;
Kuusisto, Johanna;
Pihlajamäki, Jussi;
Auriola, Seppo;
Lehtonen, Marko;
Rolandsson, Olov;
Bergdahl, Ingvar A.;
Nordin, Elise;
Ilanne-Parikka, Pirjo;
Keinänen-Kiukaanniemi, Sirkka;
Landberg, Rikard;
Eriksson, Johan G.;
Tuomilehto, Jaakko;
Hanhineva, Kati;
Uusitupa, Matti

Publication type:

Article

Analysis of Post-Traumatic Brain Injury Gene Expression Signature Reveals Tubulins, Nfe2l2, Nfkb, Cd44, and S100a4 as Treatment Targets.

Published in:

Scientific Reports, 2016, p. 31570, doi. 10.1038/srep31570

By:

Lipponen, Anssi;
Paananen, Jussi;
Puhakka, Noora;
Pitkänen, Asla

Publication type:

Article

Dietary polyunsaturated fatty acids and the Pro12Ala polymorphisms of PPARG regulate serum lipids through divergent pathways: a randomized crossover clinical trial.

Published in:

Genes & Nutrition, 2015, v. 10, n. 6, p. 1, doi. 10.1007/s12263-015-0493-z

By:

Pihlajamäki, Jussi;
Schwab, Ursula;
Kaminska, Dorota;
Ågren, Jyrki;
Kuusisto, Johanna;
Kolehmainen, Marjukka;
Paananen, Jussi;
Laakso, Markku;
Uusitupa, Matti

Publication type:

Article