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Abundance, classification and genetic potential of Thaumarchaeota in metagenomes of European agricultural soils: a meta-analysis.
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- Environmental Microbiome, 2023, v. 18, n. 1, p. 1, doi. 10.1186/s40793-023-00479-9
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- Article
Synthetic Biology – Towards an Engineering Science.
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- European Review, 2014, v. 22, n. S1, p. S102, doi. 10.1017/S1062798713000793
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- Article
CoryneCenter -- An online resource for the integrated analysis ofcorynebacterial genome and transcriptome data.
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- BMC Systems Biology, 2007, v. 1, p. 55, doi. 10.1186/1752-0509-1-55
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- Article
The influence of a modified lipopolysaccharide O-antigen on the biosynthesis of xanthan in Xanthomonas campestris pv. campestris B100.
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- BMC Microbiology, 2016, v. 16, p. 1, doi. 10.1186/s12866-016-0710-y
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- Article
The expression of the acarbose biosynthesis gene cluster in Actinoplanes sp. SE50/110 is dependent on the growth phase.
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- BMC Genomics, 2020, v. 21, n. 1, p. N.PAG, doi. 10.1186/s12864-020-07194-6
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- Article
GISMO—gene identification using a support vector machine for ORF classification.
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- Nucleic Acids Research, 2007, v. 35, n. 2, p. 540
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- Article
Targeted in situ metatranscriptomics for selected taxa from mesophilic and thermophilic biogas plants.
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- Microbial Biotechnology, 2018, v. 11, n. 4, p. 667, doi. 10.1111/1751-7915.12982
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- Article
Corrigendum: Complete genome of the mutualistic, N<sub>2</sub>-fixing grass endophyte Azoarcus sp. strain BH72.
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- 2007
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- Correction Notice
Complete genome of the mutualistic, N<sub>2</sub>-fixing grass endophyte Azoarcus sp. strain BH72.
- Published in:
- Nature Biotechnology, 2006, v. 24, n. 11, p. 1385, doi. 10.1038/nbt1243
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- Article
Genome sequence of the ubiquitous hydrocarbon-degrading marine bacterium Alcanivorax borkumensis.
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- Nature Biotechnology, 2006, v. 24, n. 8, p. 997, doi. 10.1038/nbt1232
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- Article
The DeoR-type transcriptional regulator SugR acts as a repressor for genes encoding the phosphoenolpyruvate:sugar phosphotransferase system (PTS) in Corynebacterium glutamicum.
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- BMC Molecular Biology, 2007, v. 8, p. 104, doi. 10.1186/1471-2199-8-104
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- Article
Genome-enabled determination of amino acid biosynthesis in Xanthomonas campestris pv. campestris and identification of biosynthetic pathways for alanine, glycine, and isoleucine by <sup>13</sup>C-isotopologue profiling.
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- Molecular Genetics & Genomics, 2011, v. 286, n. 3/4, p. 1, doi. 10.1007/s00438-011-0639-7
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- Article
Genomics of high molecular weight plasmids isolated from an on-farm biopurification system.
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- Scientific Reports, 2016, p. 28284, doi. 10.1038/srep28284
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- Article
The transcriptional regulator SsuR activates expression of the Corynebacterium glutamicum sulphonate utilization genes in the absence of sulphate.
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- Molecular Microbiology, 2005, v. 58, n. 2, p. 480, doi. 10.1111/j.1365-2958.2005.04836.x
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- Article
The McbR repressor modulated by the effector substanceS-adenosylhomocysteine controls directly the transcription of a regulon involved in sulphur metabolism ofCorynebacterium glutamicumATCC 13032.
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- Molecular Microbiology, 2005, v. 56, n. 4, p. 871, doi. 10.1111/j.1365-2958.2005.04586.x
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- Article
Identification of Oxygen-Responsive Transcripts in the Silage Inoculant Lactobacillus buchneri CD034 by RNA Sequencing.
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- PLoS ONE, 2015, v. 10, n. 7, p. 1, doi. 10.1371/journal.pone.0134149
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- Article
The Crystal Structures of Apo and cAMP-Bound GlxR from Corynebacterium glutamicum Reveal Structural and Dynamic Changes upon cAMP Binding in CRP/FNR Family Transcription Factors.
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- PLoS ONE, 2014, v. 9, n. 12, p. 1, doi. 10.1371/journal.pone.0113265
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- Article
Construction of a Public CHO Cell Line Transcript Database Using Versatile Bioinformatics Analysis Pipelines.
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- PLoS ONE, 2014, v. 9, n. 1, p. 1, doi. 10.1371/journal.pone.0085568
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- Article
Comparative and Joint Analysis of Two Metagenomic Datasets from a Biogas Fermenter Obtained by 454- Pyrosequencing.
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- PLoS ONE, 2011, v. 6, n. 1, p. 1, doi. 10.1371/journal.pone.0014519
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- Article
Genome analysis of the sugar beet pathogen Rhizoctonia solani AG2-2IIIB revealed high numbers in secreted proteins and cell wall degrading enzymes.
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- BMC Genomics, 2016, v. 17, p. 245, doi. 10.1186/s12864-016-2561-1
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- Article
A comprehensive proteome map of the lipid-requiring nosocomial pathogen Corynebacterium jeikeium K411.
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- Proteomics, 2007, v. 7, n. 7, p. 1076, doi. 10.1002/pmic.200600833
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- Article
Mapping and comprehensive analysis of the extracellular and cell surface proteome of the human pathogen Corynebacterium diphtheriae.
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- Proteomics, 2006, v. 6, n. 8, p. 2465, doi. 10.1002/pmic.200500360
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- Article
The cytosolic, cell surface and extracellular proteomes of the biotechnologically important soil bacterium Corynebacterium efficiens YS-314 in comparison to those of Corynebacterium glutamicum ATCC 13032.
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- Proteomics, 2006, v. 6, n. 1, p. 233, doi. 10.1002/pmic.200500144
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- Article
Comparing expression level-dependent features in codon usage with protein abundance: An analysis of predictive proteomics.
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- Proteomics, 2004, v. 4, n. 1, p. 46, doi. 10.1002/pmic.200300501
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- Article
Efficient Electrotransformation of Corynebacterium diphtheriae with a Mini-Replicon Derived from the Corynebacterium glutamicum Plasmid pGA1.
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- Current Microbiology, 2002, v. 45, n. 5, p. 362, doi. 10.1007/s00284-002-3728-3
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- Article
ExoS/ChvI Two-Component Signal-Transduction System Activated in the Absence of Bacterial Phosphatidylcholine.
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- Frontiers in Plant Science, 2021, v. 12, p. 1, doi. 10.3389/fpls.2021.678976
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- Article
Exopolysaccharide Characterization of Rhizobium favelukesii LPU83 and Its Role in the Symbiosis With Alfalfa.
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- Frontiers in Plant Science, 2021, v. 11, p. N.PAG, doi. 10.3389/fpls.2021.642576
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- Article
The novel oligopeptide utilizing species Anaeropeptidivorans aminofermentans M3/9T, its role in anaerobic digestion and occurrence as deduced from large-scale fragment recruitment analyses.
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- Frontiers in Microbiology, 2022, v. 13, p. 01, doi. 10.3389/fmicb.2022.1032515
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- Article
Unraveling the microbiome of a thermophilic biogas plant by metagenome and metatranscriptome analysis complemented by characterization of bacterial and archaeal isolates.
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- Biotechnology for Biofuels, 2016, v. 9, p. 1, doi. 10.1186/s13068-016-0581-3
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- Article
Identification and genome reconstruction of abundant distinct taxa in microbiomes from one thermophilic and three mesophilic production-scale biogas plants.
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- Biotechnology for Biofuels, 2016, v. 9, p. 1, doi. 10.1186/s13068-016-0565-3
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- Article
A metabolomic approach to characterize the acid-tolerance response in Sinorhizobium meliloti.
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- Metabolomics, 2017, v. 13, n. 6, p. 1, doi. 10.1007/s11306-017-1210-2
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- Article
Functional genomics and expression analysis of the Corynebacterium glutamicum fpr2-cysIXHDNYZ gene cluster involved in assimilatory sulphate reduction.
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- BMC Genomics, 2005, v. 6, p. 1, doi. 10.1186/1471-2164-6-121
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- Article
The individual and common repertoire of DNA-binding transcriptional regulators of Corynebacterium glutamicum, Corynebacterium efficiens, Corynebacterium diphtheriae and Corynebacterium jeikeium deduced from the complete genome sequences.
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- BMC Genomics, 2005, v. 6, p. 1, doi. 10.1186/1471-2164-6-86
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- Article
EMMA 2 -- A MAGE-compliant system for the collaborative analysis and integration of microarray data.
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- BMC Bioinformatics, 2009, v. 10, p. 1, doi. 10.1186/1471-2105-10-50
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- Article
EDGAR: A software framework for the comparative analysis of prokaryotic genomes.
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- BMC Bioinformatics, 2009, v. 10, p. 1, doi. 10.1186/1471-2105-10-154
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- Article
Proteome analysis of Corynebacterium glutamicum.
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- Electrophoresis, 2001, v. 22, n. 9, p. 1712, doi. 10.1002/1522-2683(200105)22:9<1712::AID-ELPS1712>3.0.CO;2-G
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- Publication type:
- Article
Sigma Factor Engineering in Actinoplanes sp. SE50/110: Expression of the Alternative Sigma Factor Gene ACSP50_0507 (σH As) Enhances Acarbose Yield and Alters Cell Morphology.
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- Microorganisms, 2024, v. 12, n. 6, p. 1241, doi. 10.3390/microorganisms12061241
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- Article
Role of MalQ Enzyme in a Reconstructed Maltose/Maltodextrin Pathway in Actinoplanes sp. SE50/110.
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- Microorganisms, 2024, v. 12, n. 6, p. 1221, doi. 10.3390/microorganisms12061221
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- Publication type:
- Article
Uncovering Microbiome Adaptations in a Full-Scale Biogas Plant: Insights from MAG-Centric Metagenomics and Metaproteomics.
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- Microorganisms, 2023, v. 11, n. 10, p. 2412, doi. 10.3390/microorganisms11102412
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- Article
Indicative Marker Microbiome Structures Deduced from the Taxonomic Inventory of 67 Full-Scale Anaerobic Digesters of 49 Agricultural Biogas Plants.
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- Microorganisms, 2021, v. 9, n. 7, p. 1457, doi. 10.3390/microorganisms9071457
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- Article
The Role of Petrimonas mucosa ING2-E5A T in Mesophilic Biogas Reactor Systems as Deduced from Multiomics Analyses.
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- Microorganisms, 2020, v. 8, n. 12, p. 2024, doi. 10.3390/microorganisms8122024
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- Article
Genome Analyses and Genome-Centered Metatranscriptomics of Methanothermobacter wolfeii Strain SIV6, Isolated from a Thermophilic Production-Scale Biogas Fermenter.
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- Microorganisms, 2020, v. 8, n. 1, p. 13, doi. 10.3390/microorganisms8010013
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- Publication type:
- Article
Low-molecular-weight succinoglycan is predominantly produced by Rhizobium meliloti strains carrying a mutated ExoP protein characterized by a periplasmic N-terminal domain and a missing C-terminal domain.
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- Molecular Microbiology, 1995, v. 16, n. 2, p. 191, doi. 10.1111/j.1365-2958.1995.tb02292.x
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- Article
GenDB—an open source genome annotation system for prokaryote genomes.
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- Nucleic Acids Research, 2003, v. 31, n. 8, p. 2187, doi. 10.1093/nar/gkg312
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- Publication type:
- Article
The genetic organization and evolution of the broad host range mercury resistance plasmid pSB102 isolated from a microbial population residing in the rhizosphere of alfalfa.
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- Nucleic Acids Research, 2001, v. 29, n. 24, p. 5169, doi. 10.1093/nar/29.24.5169
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- Article
EST sequencing and time course microarray hybridizations identify more than 700 Medicago truncatula genes with developmental expression regulation in flowers and pods.
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- Planta: An International Journal of Plant Biology, 2005, v. 222, n. 2, p. 269, doi. 10.1007/s00425-005-1543-3
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- Article
The lipopolysaccharides of the phytopathogen Xanthomonas campestris pv. campestris induce an oxidative burst reaction in cell cultures of Nicotiana tabacum.
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- Planta: An International Journal of Plant Biology, 2001, v. 213, n. 2, p. 214, doi. 10.1007/s004250000493
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- Article
Comprehensive Proteome Profiling of a Xanthomonas campestris pv. Campestris B100 Culture Grown in Minimal Medium with a Specific Focus on Nutrient Consumption and Xanthan Biosynthesis.
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- Proteomes, 2024, v. 12, n. 2, p. 12, doi. 10.3390/proteomes12020012
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- Article
Implementing FAIR data management within the German Network for Bioinformatics Infrastructure (de.NBI) exemplified by selected use cases.
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- Briefings in Bioinformatics, 2021, v. 22, n. 5, p. 1, doi. 10.1093/bib/bbab010
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- Article
A generally applicable lightweight method for calculating a value structure for tools and services in bioinformatics infrastructure projects.
- Published in:
- Briefings in Bioinformatics, 2019, p. 1215, doi. 10.1093/bib/bbx140
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- Article