Works matching AU Overton, James A

Results: 35

Query enhancement through the practical application of ontology: the IEDB and OBI.

Published in:

Journal of Biomedical Semantics, 2013, v. 4, n. Suppl 1, p. 1, doi. 10.1186/2041-1480-4-S1-S6

By:

Vita, Randi;
Overton, James A.;
Greenbaum, Jason A.;
Sette, Alessandro;
consortium, OBI;
Peters, Bjoern

Publication type:

Article

Economic Crisis and the End of Democracy: Politics in Newfoundland During the Great Depression.

Published in:

Labour / Travail, 1990, v. 26, p. 85

By:

Overton, James

Publication type:

Article

FAMILIAL CUTANEOUS PORPHYRIA.

Published in:

British Journal of Dermatology, 1965, v. 77, n. 3, p. 130, doi. 10.1111/j.1365-2133.1965.tb14615.x

By:

Barnes, H. D.;
Overton, James;
Sweet, K. D.

Publication type:

Article

TOURISM DEVELOPMENT, CONSERVATION, AND CONFLICT: GAME LAWS FOR CARIBOU PROTECTION IN NEWFOUNDLAND.

Published in:

Canadian Geographer, 1980, v. 24, n. 1, p. 40, doi. 10.1111/j.1541-0064.1980.tb00974.x

By:

OVERTON, JAMES

Publication type:

Article

Selectin-targeting glycosaminoglycan-peptide conjugate limits neutrophil-mediated cardiac reperfusion injury.

Published in:

Cardiovascular Research, 2022, v. 118, n. 1, p. 267, doi. 10.1093/cvr/cvaa312

By:

Dehghani, Tima;
Thai, Phung N;
Sodhi, Harkanwalpreet;
Ren, Lu;
Sirish, Padmini;
Nader, Carol E;
Timofeyev, Valeriy;
Overton, James L;
Li, Xiaocen;
Lam, Kit S;
Chiamvimonvat, Nipavan;
Panitch, Alyssa

Publication type:

Article

ROBOT: A Tool for Automating Ontology Workflows.

Published in:

BMC Bioinformatics, 2019, v. 20, n. 1, p. N.PAG, doi. 10.1186/s12859-019-3002-3

By:

Jackson, Rebecca C.;
Balhoff, James P.;
Douglass, Eric;
Harris, Nomi L.;
Mungall, Christopher J.;
Overton, James A.

Publication type:

Article

Reporting and connecting cell type names and gating definitions through ontologies.

Published in:

BMC Bioinformatics, 2019, v. 20, n. 1, p. 259, doi. 10.1186/s12859-019-2725-5

By:

Overton, James A.;
Vita, Randi;
Dunn, Patrick;
Burel, Julie G.;
Bukhari, Syed Ahmad Chan;
Cheung, Kei-Hoi;
Kleinstein, Steven H.;
Diehl, Alexander D.;
Peters, Bjoern

Publication type:

Article

Assessment of Chloroquine and Hydroxychloroquine Safety Profiles: A Systematic Review and Meta-Analysis.

Published in:

Frontiers in Pharmacology, 2020, v. 11, p. N.PAG, doi. 10.3389/fphar.2020.562777

By:

Ren, Lu;
Xu, Wilson;
Overton, James L.;
Yu, Shandong;
Chiamvimonvat, Nipavan;
Thai, Phung N.

Publication type:

Article

Global Game, Local Arena: Restructuring in Corner Brook, Newfoundland.

Published in:

2007

By:

Overton, James

Publication type:

Book Review

"A Future in the Past"? Tourism Development, Outport Archaeology, and the Politics of Deindustrialization in Newfoundland and Labrador in the 1990s.

Published in:

Urban History Review / Revue d'Histoire Urbaine, 2007, v. 35, n. 2, p. 60, doi. 10.7202/1015922ar

By:

Overton, James

Publication type:

Article

Semantic representation of reported measurements in radiology.

Published in:

2016

By:

Oberkampf, Heiner;
Zillner, Sonja;
Overton, James A.;
Bauer, Bernhard;
Cavallaro, Alexander;
Uder, Michael;
Hammon, Matthias

Publication type:

journal article

On the Organization of the Nuclei in the Pollen Mothercells of Certain Plants, with Especial Reference to the Permanence of the Chromosomes.

Published in:

Annals of Botany, 1909, v. os-23, n. 1, p. 19

By:

OVERTON, JAMES BERTRAM

Publication type:

Article

Standardizing free-text data exemplified by two fields from the Immune Epitope Database.

Published in:

Journal of Biomedical Semantics, 2025, v. 16, n. 1, p. 1, doi. 10.1186/s13326-025-00324-7

By:

Duesing, Sebastian;
Bennett, Jason;
Overton, James A.;
Vita, Randi;
Peters, Bjoern

Publication type:

Article

The eXtensible ontology development (XOD) principles and tool implementation to support ontology interoperability.

Published in:

Journal of Biomedical Semantics, 2018, v. 9, p. 1, doi. 10.1186/s13326-017-0169-2

By:

He, Yongqun;
Xiang, Zuoshuang;
Zheng, Jie;
Lin, Yu;
Overton, James A.;
Ong, Edison

Publication type:

Article

An ontology for major histocompatibility restriction.

Published in:

Journal of Biomedical Semantics, 2016, v. 7, p. 1, doi. 10.1186/s13326-016-0045-5

By:

Vita, Randi;
Overton, James A.;
Seymour, Emily;
Sidney, John;
Kaufman, Jim;
Tallmadge, Rebecca L.;
Ellis, Shirley;
Hammond, John;
Butcher, Geoff W.;
Sette, Alessandro;
Peters, Bjoern

Publication type:

Article

Book Reviews.

Published in:

2001

By:

Overton, James

Publication type:

Book Review

The Immune Epitope Database (IEDB): 2024 update.

Published in:

Nucleic Acids Research, 2025, v. 53, n. D1, p. D436, doi. 10.1093/nar/gkae1092

By:

Vita, Randi;
Blazeska, Nina;
Marrama, Daniel;
Members, IEDB Curation Team;
Duesing, Sebastian;
Bennett, Jason;
Greenbaum, Jason;
De Almeida Mendes, Marcus;
Mahita, Jarjapu;
Wheeler, Daniel K;
Cantrell, Jason R;
Overton, James A;
Natale, Darren A;
Sette, Alessandro;
Peters, Bjoern

Publication type:

Article

The Immune Epitope Database (IEDB): 2018 update.

Published in:

Nucleic Acids Research, 2019, v. 47, n. D1, p. D339, doi. 10.1093/nar/gky1006

By:

Vita, Randi;
Mahajan, Swapnil;
Overton, James A;
Dhanda, Sandeep Kumar;
Martini, Sheridan;
Cantrell, Jason R;
Wheeler, Daniel K;
Sette, Alessandro;
Peters, Bjoern

Publication type:

Article

The immune epitope database (IEDB) 3.0.

Published in:

Nucleic Acids Research, 2015, v. 43, n. D1, p. D405, doi. 10.1093/nar/gku938

By:

Vita, Randi;
Overton, James A.;
Greenbaum, Jason A.;
Ponomarenko, Julia;
Clark, Jason D.;
Cantrell, Jason R.;
Wheeler, Daniel K.;
Gabbard, Joseph L.;
Hix, Deborah;
Sette, Alessandro;
Peters, Bjoern

Publication type:

Article

Modified kit procedure for the kinetic assay of ethanol.

Published in:

Biotechnology & Bioengineering, 1980, v. 22, n. 11, p. 2383, doi. 10.1002/bit.260221113

By:

Bostick, William D.;
Overton, James B.

Publication type:

Article

Coronavirus Immunotherapeutic Consortium Database.

Published in:

Database: The Journal of Biological Databases & Curation, 2023, v. 2023, p. 1, doi. 10.1093/database/baac112

By:

Mahita, Jarjapu;
Ha, Brendan;
Gambiez, Anais;
Schendel, Sharon L;
Li, Haoyang;
Hastie, Kathryn M;
Dennison, S Moses;
Li, Kan;
Kuzmina, Natalia;
Periasamy, Sivakumar;
Bukreyev, Alexander;
Munt, Jennifer E;
Osei-Twum, Mary;
Atyeo, Caroline;
Overton, James A;
Vita, Randi;
Guzman-Orozco, Hector;
Mendes, Marcus;
Kojima, Mari;
Halfmann, Peter J

Publication type:

Article

Ontology Development Kit: a toolkit for building, maintaining and standardizing biomedical ontologies.

Published in:

Database: The Journal of Biological Databases & Curation, 2022, v. 2022, p. 1, doi. 10.1093/database/baac087

By:

Matentzoglu, Nicolas;
Goutte-Gattat, Damien;
Tan, Shawn Zheng Kai;
Balhoff, James P;
Carbon, Seth;
Caron, Anita R;
Duncan, William D;
Flack, Joe E;
Haendel, Melissa;
Harris, Nomi L;
Hogan, William R;
Hoyt, Charles Tapley;
Jackson, Rebecca C;
Kim, HyeongSik;
Kir, Huseyin;
Larralde, Martin;
McMurry, Julie A;
Overton, James A;
Peters, Bjoern;
Pilgrim, Clare

Publication type:

Article

OBO Foundry in 2021: operationalizing open data principles to evaluate ontologies.

Published in:

Database: The Journal of Biological Databases & Curation, 2021, v. 2021, p. 1, doi. 10.1093/database/baab069

By:

Jackson, Rebecca;
Matentzoglu, Nicolas;
Overton, James A;
Vita, Randi;
Balhoff, James P;
Buttigieg, Pier Luigi;
Carbon, Seth;
Courtot, Melanie;
Diehl, Alexander D;
Dooley, Damion M;
Duncan, William D;
Harris, Nomi L;
Haendel, Melissa A;
Lewis, Suzanna E;
Natale, Darren A;
Osumi-Sutherland, David;
Ruttenberg, Alan;
Schriml, Lynn M;
Smith, Barry;
Stoeckert Jr., Christian J

Publication type:

Article

Standardization of assay representation in the Ontology for Biomedical Investigations.

Published in:

Database: The Journal of Biological Databases & Curation, 2021, v. 2021, p. 1, doi. 10.1093/database/baab040

By:

Vita, Randi;
Zheng, Jie;
Jackson, Rebecca;
Dooley, Damion;
Overton, James A;
Miller, Mark A;
Berrios, Daniel C;
Scheuermann, Richard H;
He, Yongqun;
McGinty, Hande Küçük;
Brochhausen, Mathias;
Lin, Aisyah Yu;
Jain, Sagar B;
Chibucos, Marcus C;
Judkins, John;
Giglio, Michelle G;
Feng, Irene Y;
Burns, Gully;
Brush, Matthew H;
Peters, Bjoern

Publication type:

Article

immunologically friendly classification of non-peptidic ligands.

Published in:

Database: The Journal of Biological Databases & Curation, 2021, v. 2021, p. 1, doi. 10.1093/database/baab014

By:

Edwards, Lindy;
Jackson, Rebecca;
Overton, James A;
Vita, Randi;
Blazeska, Nina;
Peters, Bjoern;
Sette, Alessandro

Publication type:

Article

A structured model for immune exposures.

Published in:

Database: The Journal of Biological Databases & Curation, 2020, v. 2020, p. 1, doi. 10.1093/database/baaa016

By:

Vita, Randi;
Overton, James A;
Dunn, Patrick;
Cheung, Kei-Hoi;
Kleinstein, Steven H;
Sette, Alessandro;
Peters, Bjoern

Publication type:

Article

Identification of errors in the IEDB using ontologies.

Published in:

Database: The Journal of Biological Databases & Curation, 2018, v. 2018, p. 1, doi. 10.1093/database/bay005

By:

Vita, Randi;
Overton, James A;
Peters, Bjoern

Publication type:

Article

FAIR principles and the IEDB: short-term improvements and a long-term vision of OBO-foundry mediated machine-actionable interoperability.

Published in:

Database: The Journal of Biological Databases & Curation, 2018, v. 2018, p. 1, doi. 10.1093/database/bax105

By:

Vita, Randi;
Overton, James A;
Mungall, Christopher J;
Sette, Alessandro;
Peters, Bjoern

Publication type:

Article

Better living through ontologies at the Immune Epitope Database.

Published in:

Database: The Journal of Biological Databases & Curation, 2017, v. 2017, n. 1, p. 1, doi. 10.1093/database/bax014

By:

Vita, Randi;
Overton, James A.;
Sette, Alessandro;
Peters, Bjoern

Publication type:

Article

'Explain' in scientific discourse.

Published in:

Synthese, 2013, v. 190, n. 8, p. 1383, doi. 10.1007/s11229-012-0109-8

By:

Overton, James

Publication type:

Article

Mechanisms, Types, and Abstractions.

Published in:

Philosophy of Science, 2011, v. 78, n. 5, p. 941, doi. 10.1086/662274

By:

Overton, James A.

Publication type:

Article

Public relief and social unrest in Newfoundland in the 1930s: An evaluation of the ideas of Piven and Cloward.

Published in:

Canadian Journal of Sociology, 1988, v. 13, n. 1/2, p. 143

By:

Overton, James

Publication type:

Article

A CRITICAL EXAMINATION OF THE ESTABLISHMENT OF NATIONAL PARKS AND TOURISM IN UNDERDEVELOPED AREAS: GROS MORNE NATIONAL PARK IN NEWFOUNDLAND.

Published in:

Antipode, 1979, v. 11, n. 2, p. 34, doi. 10.1111/j.1467-8330.1979.tb00128.x

By:

OVERTON, JAMES

Publication type:

Article

A CRITICAL EXAMINATION OF THE ESTABLISHMENT OF NATIONAL PARKS AND TOURISM IN UNDERDEVELOPED AREAS: GROS MORNE NATIONAL PARK IN NEWFOUNDLAND.

Published in:

Antipode, 1972, v. 4, n. 1, p. 34, doi. 10.1111/j.1467-8330.1972.tb00733.x

By:

OVERTON, JAMES

Publication type:

Article

Chronic Diclofenac Exposure Increases Mitochondrial Oxidative Stress, Inflammatory Mediators, and Cardiac Dysfunction.

Published in:

Cardiovascular Drugs & Therapy, 2023, v. 37, n. 1, p. 25, doi. 10.1007/s10557-021-07253-4

By:

Thai, Phung N.;
Ren, Lu;
Xu, Wilson;
Overton, James;
Timofeyev, Valeriy;
Nader, Carol E.;
Haddad, Michael;
Yang, Jun;
Gomes, Aldrin V;
Hammock, Bruce D.;
Chiamvimonvat, Nipavan;
Sirish, Padmini

Publication type:

Article