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inStrain profiles population microdiversity from metagenomic data and sensitively detects shared microbial strains.
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- Nature Biotechnology, 2021, v. 39, n. 6, p. 727, doi. 10.1038/s41587-020-00797-0
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- Article
Measurement of bacterial replication rates in microbial communities.
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- Nature Biotechnology, 2016, v. 34, n. 12, p. 1256, doi. 10.1038/nbt.3704
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- Article
Function, expression, specificity, diversity and incompatibility of actinobacteriophage parABS systems.
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- Molecular Microbiology, 2016, v. 101, n. 4, p. 625, doi. 10.1111/mmi.13414
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- Article
Author Correction: Hydrogen-based metabolism as an ancestral trait in lineages sibling to the Cyanobacteria.
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- 2019
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- Correction Notice
Hydrogen-based metabolism as an ancestral trait in lineages sibling to the Cyanobacteria.
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- Nature Communications, 2019, v. 10, n. 1, p. 1, doi. 10.1038/s41467-018-08246-y
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- Article
Combined analysis of microbial metagenomic and metatranscriptomic sequencing data to assess in situ physiological conditions in the premature infant gut.
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- PLoS ONE, 2020, v. 15, n. 3, p. 1, doi. 10.1371/journal.pone.0229537
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- Article
Using strain-resolved analysis to identify contamination in metagenomics data.
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- Microbiome, 2023, v. 11, n. 1, p. 1, doi. 10.1186/s40168-023-01477-2
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- Article
Genome-resolved metagenomics of eukaryotic populations during early colonization of premature infants and in hospital rooms.
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- Microbiome, 2019, v. 7, n. 1, p. N.PAG, doi. 10.1186/s40168-019-0638-1
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- Article
The developing premature infant gut microbiome is a major factor shaping the microbiome of neonatal intensive care unit rooms.
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- Microbiome, 2018, v. 6, n. 1, p. N.PAG, doi. 10.1186/s40168-018-0493-5
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- Article
Strain-resolved analysis of hospital rooms and infants reveals overlap between the human and room microbiome.
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- Nature Communications, 2017, v. 8, n. 1, p. 1, doi. 10.1038/s41467-017-02018-w
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- Article
Meanders as a scaling motif for understanding of floodplain soil microbiome and biogeochemical potential at the watershed scale.
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- Microbiome, 2021, v. 9, n. 1, p. 1, doi. 10.1186/s40168-020-00957-z
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- Article
Genetic and behavioral adaptation of Candida parapsilosis to the microbiome of hospitalized infants revealed by in situ genomics, transcriptomics, and proteomics.
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- Microbiome, 2021, v. 9, n. 1, p. 1, doi. 10.1186/s40168-021-01085-y
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- Article