Works matching AU Offmann, Bernard

Results: 32

Comparative sequence analysis of CP12, a small protein involved in the formation of a Calvin cycle complex in photosynthetic organisms.

Published in:

Photosynthesis Research, 2010, v. 103, n. 3, p. 183, doi. 10.1007/s11120-010-9542-z

By:

Groben, René;
Kaloudas, Dimitrios;
Raines, Christine A.;
Offmann, Bernard;
Maberly, Stephen C.;
Gontero, Brigitte

Publication type:

Article

A machine learning approach for reliable prediction of amino acid interactions and its application in the directed evolution of enantioselective enzymes.

Published in:

Scientific Reports, 2018, v. 8, n. 1, p. 1, doi. 10.1038/s41598-018-35033-y

By:

Cadet, Frédéric;
Fontaine, Nicolas;
Li, Guangyue;
Sanchis, Joaquin;
Ng Fuk Chong, Matthieu;
Pandjaitan, Rudy;
Vetrivel, Iyanar;
Offmann, Bernard;
Reetz, Manfred T.

Publication type:

Article

Comprehensive History of CSP Genes: Evolution, Phylogenetic Distribution and Functions.

Published in:

Genes, 2020, v. 11, n. 4, p. 1, doi. 10.3390/genes11040413

By:

Guoxia Liu;
Ning Xuan;
Rajashekar, Balaji;
Arnaud, Philippe;
Offmann, Bernard;
Picimbon, Jean-François

Publication type:

Article

A Machine Learning Approach for Efficient Selection of Enzyme Concentrations and Its Application for Flux Optimization.

Published in:

Catalysts (2073-4344), 2020, v. 10, n. 3, p. 291, doi. 10.3390/catal10030291

By:

Ajjolli Nagaraja, Anamya;
Charton, Philippe;
Cadet, Xavier F.;
Fontaine, Nicolas;
Delsaut, Mathieu;
Wiltschi, Birgit;
Voit, Alena;
Offmann, Bernard;
Damour, Cedric;
Grondin-Perez, Brigitte;
Cadet, Frederic

Publication type:

Article

Length Variations amongst Protein Domain Superfamilies and Consequences on Structure and Function.

Published in:

PLoS ONE, 2009, v. 4, n. 3, p. 1, doi. 10.1371/journal.pone.0004981

By:

Sandhya, Sankaran;
Rani, Saane Sudha;
Pankaj, Barah;
Govind, Madabosse Kande;
Offmann, Bernard;
Srinivasan, Narayanaswamy;
Sowdhamini, Ramanathan

Publication type:

Article

ENZYMES AS STRUCTURAL TOOL IN INFRARED SPECTROSCOPY.

Published in:

Spectroscopy Letters, 2002, v. 35, n. 4, p. 523, doi. 10.1081/SL-120013888

By:

Offmann, Bernard;
Cadet, Frédéric

Publication type:

Article

Evidence for Potassium-Sucrose Interaction in Biological Mid-Infrared Spectra by Multidimensional Analysis.

Published in:

Spectroscopy Letters, 1996, v. 29, n. 7, p. 1353, doi. 10.1080/00387019608007128

By:

Cadet, Frédéric;
Offmann, Bernard

Publication type:

Article

Gram-Schmidt Orthogonalization and Elimination of the Effect of Unwanted Component Spectra Applied to a Biological Mid-infrared Spectra Collection.

Published in:

Spectroscopy Letters, 1996, v. 29, n. 5, p. 901, doi. 10.1080/00387019608001620

By:

Cadet, Frédéric;
Offmann, Bernard

Publication type:

Article

Baseline Correction Applied to a Biological: Mid-Infrared Spectra Collection.

Published in:

Spectroscopy Letters, 1996, v. 29, n. 4, p. 591, doi. 10.1080/00387019608007054

By:

Cadet, Frédéric;
Offmann, Bernard

Publication type:

Article

EcRBPome: a comprehensive database of all known E. coli RNA-binding proteins.

Published in:

BMC Genomics, 2019, v. 20, n. 1, p. 1, doi. 10.1186/s12864-019-5755-5

By:

Ghosh, Pritha;
Joshi, Adwait;
Guita, Niang;
Offmann, Bernard;
Sowdhamini, R.

Publication type:

Article

Cross-Genome Comparisons of Newly Identified Domains in Mycoplasma gallisepticum and Domain Architectures with Other Mycoplasma species.

Published in:

Comparative & Functional Genomics, 2011, p. 1, doi. 10.1155/2011/878973

By:

Chilamakuri, Chandra Sekhar Reddy;
Joshi, Adwait;
Rani, Sane Sudha;
Offmann, Bernard;
Sowdhamini, R.

Publication type:

Article

Knowledge-based prediction of protein backbone conformation using a structural alphabet.

Published in:

PLoS ONE, 2017, v. 12, n. 11, p. 1, doi. 10.1371/journal.pone.0186215

By:

Vetrivel, Iyanar;
Mahajan, Swapnil;
Tyagi, Manoj;
Hoffmann, Lionel;
Sanejouand, Yves-Henri;
Srinivasan, Narayanaswamy;
De Brevern, Alexandre G.;
Cadet, Frédéric;
Offmann, Bernard

Publication type:

Article

Analycys: A database for conservation and conformation of disulphide bonds in homologous protein domains.

Published in:

Proteins, 2007, v. 67, n. 2, p. 255, doi. 10.1002/prot.21318

By:

Thangudu, Ratna R.;
Sharma, Priyanka;
Srinivasan, N.;
Offmann, Bernard

Publication type:

Article

A substitution matrix for structural alphabet based on structural alignment of homologous proteins and its applications.

Published in:

Proteins, 2006, v. 65, n. 1, p. 32, doi. 10.1002/prot.21087

By:

Tyagi, Manoj;
Gowri, Venkataraman S.;
Srinivasan, Narayanaswamy;
de Brevern, Alexandre G.;
Offmann, Bernard

Publication type:

Article

Multitarget selection of catalytic antibodies with β-lactamase activity using phage display.

Published in:

FEBS Journal, 2017, v. 284, n. 4, p. 634, doi. 10.1111/febs.14012

By:

Shahsavarian, Melody A.;
Chaaya, Nancy;
Costa, Narciso;
Boquet, Didier;
Atkinson, Alexandre;
Offmann, Bernard;
Kaveri, Srini V.;
Lacroix‐Desmazes, Sébastien;
Friboulet, Alain;
Avalle, Bérangère;
Padiolleau‐Lefèvre, Séverine

Publication type:

Article

Publisher Correction: A machine learning approach for reliable prediction of amino acid interactions and its application in the directed evolution of enantioselective enzymes.

Published in:

2021

By:

Cadet, Frédéric;
Fontaine, Nicolas;
Li, Guangyue;
Sanchis, Joaquin;
Chong, Matthieu Ng Fuk;
Pandjaitan, Rudy;
Vetrivel, Iyanar;
Offmann, Bernard;
Reetz, Manfred T.

Publication type:

Correction Notice

Association of Putative Members to Family of Mosquito Odorant Binding Proteins: Scoring Scheme Using Fuzzy Functional Templates and Cys Residue Positions.

Published in:

Bioinformatics & Biology Insights, 2013, n. 7, p. 231, doi. 10.4137/BBI.S11096

By:

Manoharan, Malini;
Sankar, Kannan;
Offmann, Bernard;
Ramanathan, Sowdhamini

Publication type:

Article

Do SA: Database of Structural Alignments.

Published in:

Database: The Journal of Biological Databases & Curation, 2013, v. 2013, p. 1, doi. 10.1093/database/bat048

By:

Mahajan, Swapnil;
Agarwal, Garima;
Iftekhar, Mohammed;
Offmann, Bernard;
de Brevern, Alexandre G.;
Srinivasan, Narayanaswamy

Publication type:

Article

Genotyping and Bio-Sensing Chemosensory Proteins in Insects.

Published in:

Sensors (14248220), 2017, v. 17, n. 8, p. 1801, doi. 10.3390/s17081801

By:

Guoxia Liu;
Arnaud, Philippe;
Offmann, Bernard;
Jean-François, Picimbon

Publication type:

Article

Systematic search for putative new domain families in Mycoplasma gallisepticum genome.

Published in:

BMC Research Notes, 2010, v. 3, p. 98, doi. 10.1186/1756-0500-3-98

By:

Reddy, Chilamakuri C. S.;
Rani, Sane Sudha;
Offmann, Bernard;
Sowdhamini, R.

Publication type:

Article

Biotype Characterization, Developmental Profiling, Insecticide Response and Binding Property of Bemisia tabaci Chemosensory Proteins: Role of CSP in Insect Defense.

Published in:

PLoS ONE, 2016, v. 11, n. 5, p. 1, doi. 10.1371/journal.pone.0154706

By:

Liu, Guoxia;
Ma, Hongmei;
Xie, Hongyan;
Xuan, Ning;
Guo, Xia;
Fan, Zhongxue;
Rajashekar, Balaji;
Arnaud, Philippe;
Offmann, Bernard;
Picimbon, Jean-François

Publication type:

Article

A web-based tool for rational screening of mutants libraries using ProSAR.

Published in:

PEDS: Protein Engineering, Design & Selection, 2014, v. 27, n. 10, p. 375, doi. 10.1093/protein/gzu035

By:

Berland, Magali;
Offmann, Bernard;
André, Isabelle;
Remaud-Siméon, Magali;
Charton, Philippe

Publication type:

Article

Redox-active disulfides in a plant light switch: A Pbl problem.

Published in:

Biochemistry & Molecular Biology Education, 2002, v. 30, n. 4, p. 249, doi. 10.1002/bmb.2002.494030040069

By:

Offmann, Bernard;
Cadet, Frédéric

Publication type:

Article

Genetic background and immunological status influence B cell repertoire diversity in mice.

Published in:

Scientific Reports, 2019, v. 9, n. 1, p. N.PAG, doi. 10.1038/s41598-019-50714-y

By:

Chaaya, Nancy;
Shahsavarian, Melody A.;
Maffucci, Irene;
Friboulet, Alain;
Offmann, Bernard;
Léger, Jean-Benoist;
Rousseau, Sylvain;
Avalle, Bérangère;
Padiolleau-Lefèvre, Séverine

Publication type:

Article

Comparative Genomics of Odorant Binding Proteins in Anopheles gambiae, Aedes aegypti, and Culex quinquefasciatus.

Published in:

Genome Biology & Evolution, 2013, v. 5, n. 1, p. 163, doi. 10.1093/gbe/evs131

By:

Manoharan, Malini;
Ng Fuk Chong, Matthieu;
Vaïtinadapoulé, Aurore;
Frumence, Etienne;
Sowdhamini, Ramanathan;
Offmann, Bernard

Publication type:

Article

Flux prediction using artificial neural network (ANN) for the upper part of glycolysis.

Published in:

PLoS ONE, 2019, v. 14, n. 5, p. 1, doi. 10.1371/journal.pone.0216178

By:

Ajjolli Nagaraja, Anamya;
Fontaine, Nicolas;
Delsaut, Mathieu;
Charton, Philippe;
Damour, Cedric;
Offmann, Bernard;
Grondin-Perez, Brigitte;
Cadet, Frederic

Publication type:

Article

CUSP: an algorithm to distinguish structurally conserved and unconserved regions in protein domain alignments and its application in the study of large length variations.

Published in:

BMC Structural Biology, 2008, v. 8, p. 1, doi. 10.1186/1472-6807-8-28

By:

Sandhya, Sankaran;
Pankaj, Barah;
Govind, Madabosse Kande;
Offmann, Bernard;
Srinivasan, Narayanaswamy;
Sowdhamini, Ramanathan

Publication type:

Article

PURE: A webserver for the prediction of domains in unassigned regions in proteins.

Published in:

BMC Bioinformatics, 2008, v. 9, p. 1, doi. 10.1186/1471-2105-9-281

By:

Reddy, Chilamakuri C. S.;
Shameer, Khader;
Offmann, Bernard O.;
Sowdhamini, Ramanathan

Publication type:

Article

Use of a structural alphabet to find compatible folds for amino acid sequences.

Published in:

Protein Science: A Publication of the Protein Society, 2015, v. 24, n. 1, p. 145, doi. 10.1002/pro.2581

By:

Mahajan, Swapnil;
Brevern, Alexandre G.;
Sanejouand, Yves ‐ Henri;
Srinivasan, Narayanaswamy;
Offmann, Bernard

Publication type:

Article

Analysis of loop boundaries using different local structure assignment methods.

Published in:

Protein Science: A Publication of the Protein Society, 2009, v. 18, n. 9, p. 1869, doi. 10.1002/pro.198

By:

Tyagi, Manoj;
Bornot, Aurélie;
Offmann, Bernard;
de Brevern, Alexandre G.

Publication type:

Article

One‐shot optimization of multiple enzyme parameters: Tailoring glucose oxidase for pH and electron mediators.

Published in:

Biotechnology & Bioengineering, 2020, v. 117, n. 1, p. 17, doi. 10.1002/bit.27169

By:

Ostafe, Raluca;
Fontaine, Nicolas;
Frank, David;
Ng Fuk Chong, Matthieu;
Prodanovic, Radivoje;
Pandjaitan, Rudy;
Offmann, Bernard;
Cadet, Frédéric;
Fischer, Rainer

Publication type:

Article

An Expanded Survey of the Moth PBP/GOBP Clade in Bombyx mori : New Insight into Expression and Functional Roles.

Published in:

Frontiers in Physiology, 2021, v. 12, p. 1, doi. 10.3389/fphys.2021.712593

By:

Guo, Xia;
Xuan, Ning;
Liu, Guoxia;
Xie, Hongyan;
Lou, Qinian;
Arnaud, Philippe;
Offmann, Bernard;
Picimbon, Jean-François

Publication type:

Article