Works by Neumann, Steffen

Results: 63
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    A Modular and Expandable Ecosystem for Metabolomics Data Annotation in R.

    Published in:
    Metabolites (2218-1989), 2022, v. 12, n. 2, p. N.PAG, doi. 10.3390/metabo12020173
    By:
    • Rainer, Johannes;
    • Vicini, Andrea;
    • Salzer, Liesa;
    • Stanstrup, Jan;
    • Badia, Josep M.;
    • Neumann, Steffen;
    • Stravs, Michael A.;
    • Verri Hernandes, Vinicius;
    • Gatto, Laurent;
    • Gibb, Sebastian;
    • Witting, Michael
    Publication type:
    Article
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    The metaRbolomics Toolbox in Bioconductor and beyond.

    Published in:
    Metabolites (2218-1989), 2019, v. 9, n. 10, p. 200, doi. 10.3390/metabo9100200
    By:
    • Stanstrup, Jan;
    • Broeckling, Corey D.;
    • Helmus, Rick;
    • Hoffmann, Nils;
    • Mathé, Ewy;
    • Naake, Thomas;
    • Nicolotti, Luca;
    • Peters, Kristian;
    • Rainer, Johannes;
    • Salek, Reza M.;
    • Schulze, Tobias;
    • Schymanski, Emma L.;
    • Stravs, Michael A.;
    • Thévenot, Etienne A.;
    • Treutler, Hendrik;
    • Weber, Ralf J. M.;
    • Willighagen, Egon;
    • Witting, Michael;
    • Neumann, Steffen
    Publication type:
    Article
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    Critical Assessment of Small Molecule Identification 2016: automated methods.

    Published in:
    Journal of Cheminformatics, 2017, v. 9, n. 1, p. 1, doi. 10.1186/s13321-017-0207-1
    By:
    • Schymanski, Emma;
    • Ruttkies, Christoph;
    • Krauss, Martin;
    • Brouard, Céline;
    • Kind, Tobias;
    • Dührkop, Kai;
    • Allen, Felicity;
    • Vaniya, Arpana;
    • Verdegem, Dries;
    • Böcker, Sebastian;
    • Rousu, Juho;
    • Shen, Huibin;
    • Tsugawa, Hiroshi;
    • Sajed, Tanvir;
    • Fiehn, Oliver;
    • Ghesquière, Bart;
    • Neumann, Steffen
    Publication type:
    Article
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    Toward interoperable bioscience data.

    Published in:
    Nature Genetics, 2012, v. 44, n. 2, p. 121, doi. 10.1038/ng.1054
    By:
    • Sansone, Susanna-Assunta;
    • Rocca-Serra, Philippe;
    • Field, Dawn;
    • Maguire, Eamonn;
    • Taylor, Chris;
    • Hofmann, Oliver;
    • Fang, Hong;
    • Neumann, Steffen;
    • Tong, Weida;
    • Amaral-Zettler, Linda;
    • Begley, Kimberly;
    • Booth, Tim;
    • Bougueleret, Lydie;
    • Burns, Gully;
    • Chapman, Brad;
    • Clark, Tim;
    • Coleman, Lee-Ann;
    • Copeland, Jay;
    • Das, Sudeshna;
    • de Daruvar, Antoine
    Publication type:
    Article
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    Interim Report NFDI4Chem 2023.

    Published in:
    Research Ideas & Outcome Journal, 2024, p. 1, doi. 10.3897/rio.10.e124977
    By:
    • Neumann, Steffen;
    • Andres, Ann-Christin;
    • Bach, Felix;
    • Bender, Theo;
    • Bonatto Minella, Christian;
    • Eberl, Franziska;
    • Fischer, Tillmann G.;
    • Golub, Benjamin;
    • Harivyasi, Shashank S.;
    • Herres-Pawlis, Sonja;
    • Huang, Pei-Chi;
    • Hunold, Johannes;
    • Jollife, John D.;
    • Jung, Nicole;
    • Liermann, Johannes C.;
    • Nainala, Venkata Chandrasekhar;
    • Razum, Matthias;
    • Koepler, Oliver;
    • Steinbeck, Christoph
    Publication type:
    Article
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    Functional Traits 2.0: The power of the metabolome for ecology.

    Published in:
    Journal of Ecology, 2022, v. 110, n. 1, p. 4, doi. 10.1111/1365-2745.13826
    By:
    • Walker, Tom W. N.;
    • Alexander, Jake M.;
    • Allard, Pierre‐Marie;
    • Baines, Oliver;
    • Baldy, Virginie;
    • Bardgett, Richard D.;
    • Capdevila, Pol;
    • Coley, Phyllis D.;
    • David, Bruno;
    • Defossez, Emmanuel;
    • Endara, María‐José;
    • Ernst, Madeleine;
    • Fernandez, Catherine;
    • Forrister, Dale;
    • Gargallo‐Garriga, Albert;
    • Jassey, Vincent E. J.;
    • Marr, Sue;
    • Neumann, Steffen;
    • Pellissier, Loïc;
    • Peñuelas, Josep
    Publication type:
    Article
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    IPO: a tool for automated optimization of XCMS parameters.

    Published in:
    BMC Bioinformatics, 2015, v. 16, n. 1, p. 1, doi. 10.1186/s12859-015-0562-8
    By:
    • Libiseller, Gunnar;
    • Dvorzak, Michaela;
    • Kleb, Ulrike;
    • Gander, Edgar;
    • Eisenberg, Tobias;
    • Madeo, Frank;
    • Neumann, Steffen;
    • Trausinger, Gert;
    • Sinner, Frank;
    • Pieber, Thomas;
    • Magnes, Christoph
    Publication type:
    Article
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    Data standards can boost metabolomics research, and if there is a will, there is a way.

    Published in:
    Metabolomics, 2016, v. 12, n. 1, p. N.PAG, doi. 10.1007/s11306-015-0879-3
    By:
    • Rocca-Serra, Philippe;
    • Salek, Reza M.;
    • Arita, Masanori;
    • Correa, Elon;
    • Dayalan, Saravanan;
    • Gonzalez-Beltran, Alejandra;
    • Ebbels, Tim;
    • Goodacre, Royston;
    • Hastings, Janna;
    • Haug, Kenneth;
    • Koulman, Albert;
    • Nikolski, Macha;
    • Oresic, Matej;
    • Sansone, Susanna-Assunta;
    • Schober, Daniel;
    • Smith, James;
    • Steinbeck, Christoph;
    • Viant, Mark R.;
    • Neumann, Steffen
    Publication type:
    Article
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    COordination of Standards in MetabOlomicS (COSMOS): facilitating integrated metabolomics data access.

    Published in:
    Metabolomics, 2015, v. 11, n. 6, p. 1587, doi. 10.1007/s11306-015-0810-y
    By:
    • Salek, Reza;
    • Neumann, Steffen;
    • Schober, Daniel;
    • Hummel, Jan;
    • Billiau, Kenny;
    • Kopka, Joachim;
    • Correa, Elon;
    • Reijmers, Theo;
    • Rosato, Antonio;
    • Tenori, Leonardo;
    • Turano, Paola;
    • Marin, Silvia;
    • Deborde, Catherine;
    • Jacob, Daniel;
    • Rolin, Dominique;
    • Dartigues, Benjamin;
    • Conesa, Pablo;
    • Haug, Kenneth;
    • Rocca-Serra, Philippe;
    • O'Hagan, Steve
    Publication type:
    Article
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    The community ecology perspective of omics data.

    Published in:
    Microbiome, 2022, v. 10, n. 1, p. 1, doi. 10.1186/s40168-022-01423-8
    By:
    • Jurburg, Stephanie D.;
    • Buscot, François;
    • Chatzinotas, Antonis;
    • Chaudhari, Narendrakumar M.;
    • Clark, Adam T.;
    • Garbowski, Magda;
    • Grenié, Matthias;
    • Hom, Erik F. Y.;
    • Karakoç, Canan;
    • Marr, Susanne;
    • Neumann, Steffen;
    • Tarkka, Mika;
    • van Dam, Nicole M.;
    • Weinhold, Alexander;
    • Heintz-Buschart, Anna
    Publication type:
    Article
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    Ontologies for increasing the FAIRness of plant research data.

    Published in:
    Frontiers in Plant Science, 2023, p. 01, doi. 10.3389/fpls.2023.1279694
    By:
    • Dumschott, Kathryn;
    • Dörpholz, Hannah;
    • Laporte, Marie-Angelique;
    • Brilhaus, Dominik;
    • Schrader, Andrea;
    • Usadel, Björn;
    • Neumann, Steffen;
    • Arnaud, Elizabeth;
    • Kranz, Angela
    Publication type:
    Article
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    Data format standards in analytical chemistry.

    Published in:
    Pure & Applied Chemistry, 2022, v. 94, n. 6, p. 725, doi. 10.1515/pac-2021-3101
    By:
    • Rauh, David;
    • Blankenburg, Claudia;
    • Fischer, Tillmann G.;
    • Jung, Nicole;
    • Kuhn, Stefan;
    • Schatzschneider, Ulrich;
    • Schulze, Tobias;
    • Neumann, Steffen
    Publication type:
    Article
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