Works matching AU Nardini, Christine

Results: 35

MANIA:: A GENE NETWORK REVERSE ALGORITHM FOR COMPOUNDS MODE-OF-ACTION AND GENES INTERACTIONS INFERENCE.

Published in:

Advances in Complex Systems, 2010, v. 13, n. 1, p. 83, doi. 10.1142/S0219525910002451

By:

LAI, DARONG;
LU, HONGTAO;
LAURIA, MARIO;
BERNARDO, DIGEO DI;
NARDINI, CHRISTINE

Publication type:

Article

Adapting functional genomic tools to metagenomic analyses: investigating the role of gut bacteria in relation to obesity.

Published in:

Briefings in Functional Genomics, 2010, v. 9, n. 5/6, p. 355, doi. 10.1093/bfgp/elq011

By:

Yuanhua Liu;
Chenhong Zhang;
Liping Zhao;
Nardini, Christine

Publication type:

Article

Semi-automated socio-anthropologic analysis of the medical discourse on rheumatoid arthritis: Potential impact on public health.

Published in:

PLoS ONE, 2022, v. 17, n. 12, p. 1, doi. 10.1371/journal.pone.0279632

By:

Nardini, Christine;
Candelise, Lucia;
Turrini, Mauro;
Addimanda, Olga

Publication type:

Article

methyLImp2: faster missing value estimation for DNA methylation data.

Published in:

Bioinformatics, 2024, v. 40, n. 1, p. 1, doi. 10.1093/bioinformatics/btae001

By:

Plaksienko, Anna;
Lena, Pietro Di;
Nardini, Christine;
Angelini, Claudia

Publication type:

Article

Modified Methylation Following Electrostimulation in a Standardized Setting—Complementing a Transcriptomic Analysis.

Published in:

Cells (2073-4409), 2025, v. 14, n. 11, p. 838, doi. 10.3390/cells14110838

By:

Pietro, Biagio Di;
Villata, Simona;
Plaksienko, Anna;
Guarnieri, Tiziana;
Monego, Simeone Dal;
Degasperi, Margherita;
Lena, Pietro Di;
Licastro, Danilo;
Angelini, Claudia;
Frascella, Francesca;
Napione, Lucia;
Nardini, Christine

Publication type:

Article

TOM: a web-based integrated approach for identification of candidate disease genes.

Published in:

Nucleic Acids Research, 2006, v. 34, n. 11, p. w285, doi. 10.1093/nar/gkl340

By:

Rossi, Simona;
Masotti, Daniele;
Nardini, Christine;
Bonora, Elena;
Romeo, Giovanni;
Macii, Enrico;
Benini, Luca;
Volinia, Stefano

Publication type:

Article

Evaluation of pre-processing on the meta-analysis of DNA methylation data from the Illumina HumanMethylation450 BeadChip platform.

Published in:

PLoS ONE, 2020, v. 15, n. 3, p. 1, doi. 10.1371/journal.pone.0229763

By:

Sala, Claudia;
Di Lena, Pietro;
Fernandes Durso, Danielle;
Prodi, Andrea;
Castellani, Gastone;
Nardini, Christine

Publication type:

Article

TOM: enhancement and extension of a tool suite for in silico approaches to multigenic hereditary disorders.

Published in:

Bioinformatics, 2008, v. 24, n. 3, p. 428, doi. 10.1093/bioinformatics/btm588

By:

Daniele Masotti;
Christine Nardini;
Simona Rossi;
Elena Bonora;
Giovanni Romeo;
Stefano Volinia;
Luca Benini

Publication type:

Article

Metabolite and lipoprotein profiles reveal sex-related oxidative stress imbalance in de novo drug-naive Parkinson's disease patients.

Published in:

NPJ Parkinson's Disease, 2022, v. 8, n. 1, p. 1, doi. 10.1038/s41531-021-00274-8

By:

Meoni, Gaia;
Tenori, Leonardo;
Schade, Sebastian;
Licari, Cristina;
Pirazzini, Chiara;
Bacalini, Maria Giulia;
Garagnani, Paolo;
Turano, Paola;
PROPAG-AGEING Consortium;
Molin, Alessandra Dal;
Bartoletti-Stella, Anna;
Gabellini, Anna;
Adarmes-Gómez, Astrid Daniela;
Scaglione, Cesa Lorella Maria;
Nardini, Christine;
Rosaria, Cilea;
Boninsegna, Claudia;
Sala, Claudia;
Giuliani, Cristina;
Tejera-Parrado, Cristina

Publication type:

Article

Understanding human diseases with high-throughput quantitative measurement and analysis of molecular signatures.

Published in:

SCIENCE CHINA Life Sciences, 2013, v. 56, n. 3, p. 213, doi. 10.1007/s11427-013-4445-9

By:

Yang, Li;
Wei, Gang;
Tang, Kun;
Nardini, Christine;
Han, Jing-Dong

Publication type:

Article

Differential Anti-Inflammatory Effects of Electrostimulation in a Standardized Setting.

Published in:

International Journal of Molecular Sciences, 2024, v. 25, n. 18, p. 9808, doi. 10.3390/ijms25189808

By:

Di Pietro, Biagio;
Villata, Simona;
Dal Monego, Simeone;
Degasperi, Margherita;
Ghini, Veronica;
Guarnieri, Tiziana;
Plaksienko, Anna;
Liu, Yuanhua;
Pecchioli, Valentina;
Manni, Luigi;
Tenori, Leonardo;
Licastro, Danilo;
Angelini, Claudia;
Napione, Lucia;
Frascella, Francesca;
Nardini, Christine

Publication type:

Article

Editorial: Computational methods for analysis of DNA methylation data, volume II.

Published in:

Frontiers in Bioinformatics, 2024, p. 1, doi. 10.3389/fbinf.2024.1415791

By:

Di Lena, Pietro;
Nardini, Christine;
Pellegrini, Matteo

Publication type:

Article

Where are we in the implementation of tissue-specific epigenetic clocks?

Published in:

Frontiers in Bioinformatics, 2024, p. 1, doi. 10.3389/fbinf.2024.1306244

By:

Sala, Claudia;
Di Lena, Pietro;
Fernandes Durso, Danielle;
Faria do Valle, Italo;
Bacalini, Maria Giulia;
Dall’Olio, Daniele;
Franceschi, Claudio;
Castellani, Gastone;
Garagnani, Paolo;
Nardini, Christine

Publication type:

Article

Evaluation of different computational methods for DNA methylation-based biological age.

Published in:

Briefings in Bioinformatics, 2022, v. 23, n. 4, p. 1, doi. 10.1093/bib/bbac274

By:

Lena, Pietro Di;
Sala, Claudia;
Nardini, Christine

Publication type:

Article

LEARNING OVERLAPPING COMMUNITIES IN COMPLEX NETWORKS VIA NON-NEGATIVE MATRIX FACTORIZATION.

Published in:

International Journal of Modern Physics C: Computational Physics & Physical Computation, 2011, v. 22, n. 10, p. 1173, doi. 10.1142/S0129183111016816

By:

LAI, DARONG;
WU, XIANGJUN;
LU, HONGTAO;
NARDINI, CHRISTINE

Publication type:

Article

Missing value estimation methods for DNA methylation data.

Published in:

Bioinformatics, 2019, v. 35, n. 19, p. 3786, doi. 10.1093/bioinformatics/btz134

By:

Lena, Pietro Di;
Sala, Claudia;
Prodi, Andrea;
Nardini, Christine

Publication type:

Article

Systemic evaluation of cellular reprogramming processes exploiting a novel R-tool: eegc.

Published in:

Bioinformatics, 2017, v. 33, n. 16, p. 2532, doi. 10.1093/bioinformatics/btx205

By:

Xiaoyuan Zhou;
Guofeng Meng;
Nardini, Christine;
Hongkang Mei

Publication type:

Article

Mechanotransduction map: simulation model, molecular pathway, gene set.

Published in:

Bioinformatics, 2015, v. 31, n. 7, p. 1053, doi. 10.1093/bioinformatics/btu776

By:

Dent, Jennifer E.;
Devescovi, Valentina;
Han Li;
Di Lena, Pietro;
Youtao Lu;
Yuanhua Liu;
Nardini, Christine

Publication type:

Article

SPNConverter: a new link between static and dynamic complex network analysis.

Published in:

Bioinformatics, 2013, v. 29, n. 19, p. 2507, doi. 10.1093/bioinformatics/btt421

By:

Dent, Jennifer E.;
Yang, Xinyi;
Nardini, Christine

Publication type:

Article

Inference of gene networks—application to Bifidobacterium.

Published in:

Bioinformatics, 2011, v. 27, n. 2, p. 232, doi. 10.1093/bioinformatics/btq629

By:

Lai, Darong;
Yang, Xinyi;
Wu, Gang;
Liu, Yuanhua;
Nardini, Christine

Publication type:

Article

A method for automated pathogenic content estimation with application to rheumatoid arthritis.

Published in:

BMC Systems Biology, 2016, v. 10, p. 1, doi. 10.1186/s12918-016-0344-6

By:

Xiaoyuan Zhou;
Nardini, Christine

Publication type:

Article

From desk to bed: Computational simulations provide indication for rheumatoid arthritis clinical trials.

Published in:

BMC Systems Biology, 2013, v. 7, n. 1, p. 1, doi. 10.1186/1752-0509-7-10

By:

Dent, Jennifer E.;
Nardini, Christine

Publication type:

Article

Multilevel omic data integration in cancer cell lines: advanced annotation and emergent properties.

Published in:

BMC Systems Biology, 2013, v. 7, n. 1, p. 1, doi. 10.1186/1752-0509-7-14

By:

Yuanhua Liu;
Devescovi, Valentina;
Suning Chen;
Nardini, Christine

Publication type:

Article

tidysbml: R/Bioconductor package for SBML extraction into dataframes.

Published in:

Bioinformatics Advances, 2024, v. 4, n. 1, p. 1, doi. 10.1093/bioadv/vbae148

By:

Paparozzi, Veronica;
Nardini, Christine

Publication type:

Article

Backflow protection and residential fire sprinklers

Published in:

Journal: American Water Works Association, 1996, v. 88, n. 10, p. 60

By:

Till, Robert;
Nardini, Christine;
Bisson, Daniel;
Hart, Frederick L.

Publication type:

Article

Host-Microbiome Synergistic Control on Sphingolipid Metabolism by Mechanotransduction in Model Arthritis.

Published in:

Biomolecules (2218-273X), 2019, v. 9, n. 4, p. 144, doi. 10.3390/biom9040144

By:

Zhou, Xiaoyuan;
Devescovi, Valentina;
Liu, Yuanhua;
Dent, Jennifer E.;
Nardini, Christine

Publication type:

Article

MIMO: an efficient tool for molecular interaction maps overlap.

Published in:

BMC Bioinformatics, 2013, v. 14, n. 1, p. 1, doi. 10.1186/1471-2105-14-159

By:

Lena, Pietro Di;
Gang Wu;
Martelli, Pier Luigi;
Casadio, Rita;
Nardini, Christine

Publication type:

Article

Joint analysis of transcriptional and posttranscriptional brain tumor data: searching for emergent properties of cellular systems.

Published in:

BMC Bioinformatics, 2011, v. 12, n. 1, p. 86, doi. 10.1186/1471-2105-12-86

By:

Fronza, Raffaele;
Tramonti, Michele;
Atchley, William R.;
Nardini, Christine

Publication type:

Article

Estimage: a webserver hub for the computation of methylation age.

Published in:

Nucleic Acids Research, 2021, v. 49, n. W1, p. W199, doi. 10.1093/nar/gkab426

By:

Di Lena, Pietro;
Sala, Claudia;
Nardini, Christine

Publication type:

Article

A Comprehensive Molecular Interaction Map for Rheumatoid Arthritis.

Published in:

PLoS ONE, 2010, v. 5, n. 4, p. 1, doi. 10.1371/journal.pone.0010137

By:

Gang Wu;
Lisha Zhu;
Dent, Jennifer E.;
Nardini, Christine

Publication type:

Article

Molecular Aging of Human Liver: An Epigenetic/Transcriptomic Signature.

Published in:

2019

By:

Bacalini, Maria Giulia;
Franceschi, Claudio;
Gentilini, Davide;
Ravaioli, Francesco;
Zhou, Xiaoyuan;
Remondini, Daniel;
Pirazzini, Chiara;
Giuliani, Cristina;
Marasco, Elena;
Gensous, Noémie;
Blasio, Anna Maria Di;
Ellis, Ewa;
Gramignoli, Roberto;
Castellani, Gastone;
Capri, Miriam;
Strom, Stephen;
Nardini, Christine;
Cescon, Matteo;
Grazi, Gian Luca;
Garagnani, Paolo

Publication type:

journal article

Corrigendum: Systemic Wound Healing Associated with local sub-Cutaneous Mechanical Stimulation.

Published in:

Scientific Reports, 2017, p. 46118, doi. 10.1038/srep46118

By:

Nardini, Christine;
Devescovi, Valentina;
Liu, Yuanhua;
Zhou, Xiaoyuan;
Lu, Youtao;
Dent, Jennifer E.

Publication type:

Article

Systemic Wound Healing Associated with local sub-Cutaneous Mechanical Stimulation.

Published in:

Scientific Reports, 2016, p. 39043, doi. 10.1038/srep39043

By:

Nardini, Christine;
Devescovi, Valentina;
Liu, Yuanhua;
Zhou, Xiaoyuan;
Lu, Youtao;
Dent, Jennifer E.

Publication type:

Article

Exploring the molecular causes of hepatitis B virus vaccination response: an approach with epigenomic and transcriptomic data.

Published in:

BMC Medical Genomics, 2014, v. 7, n. 1, p. 1, doi. 10.1186/1755-8794-7-12

By:

Youtao Lu;
Yi Cheng;
Weili Yan;
Nardini, Christine

Publication type:

Article

Methylation data imputation performances under different representations and missingness patterns.

Published in:

BMC Bioinformatics, 2020, v. 21, n. 1, p. 1, doi. 10.1186/s12859-020-03592-5

By:

Lena, Pietro Di;
Sala, Claudia;
Prodi, Andrea;
Nardini, Christine

Publication type:

Article