Works by Nakabayashi, Ryo
Results: 47
Function of AP2/ERF Transcription Factors Involved in the Regulation of Specialized Metabolism in Ophiorrhiza pumila Revealed by Transcriptomics and Metabolomics.
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- Frontiers in Plant Science, 2016, v. 7, p. 1, doi. 10.3389/fpls.2016.01861
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- Article
Multiomics-based characterization of specialized metabolites biosynthesis in Cornus Officinalis.
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- DNA Research, 2020, v. 27, n. 2, p. 1, doi. 10.1093/dnares/dsaa009
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- Article
Linkage mapping, molecular cloning and functional analysis of soybean gene Fg3 encoding flavonol 3-O-glucoside/galactoside (1→2) glucosyltransferase.
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- BMC Plant Biology, 2015, v. 15, n. 1, p. 1, doi. 10.1186/s12870-015-0504-7
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- Article
Boosting Sensitivity in Liquid Chromatography-Fourier Transform Ion Cyclotron Resonance-Tandem Mass Spectrometry for Product Ion Analysis of Monoterpene Indole Alkaloids.
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- Frontiers in Plant Science, 2015, p. 1, doi. 10.3389/fpls.2015.01127
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- Article
Transgenic rice seed expressing flavonoid biosynthetic genes accumulate glycosylated and/or acylated flavonoids in protein bodies.
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- Journal of Experimental Botany, 2016, v. 67, n. 1, p. 95, doi. 10.1093/jxb/erv429
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- Article
Cloning and characterization of soybean gene Fg1 encoding flavonol 3- O-glucoside/galactoside (1→6) glucosyltransferase.
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- Plant Molecular Biology, 2016, v. 92, n. 4-5, p. 445, doi. 10.1007/s11103-016-0523-2
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- Article
Linkage mapping, molecular cloning and functional analysis of soybean gene Fg2 encoding flavonol 3- O-glucoside (1 → 6) rhamnosyltransferase.
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- Plant Molecular Biology, 2014, v. 84, n. 3, p. 287, doi. 10.1007/s11103-013-0133-1
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- Article
HiC-Hiker: a probabilistic model to determine contig orientation in chromosome-length scaffolds with Hi-C.
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- Bioinformatics, 2020, v. 36, n. 13, p. 3966, doi. 10.1093/bioinformatics/btaa288
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- Article
Transcriptomic, Hormonomic and Metabolomic Analyses Highlighted the Common Modules Related to Photosynthesis, Sugar Metabolism and Cell Division in Parthenocarpic Tomato Fruits during Early Fruit Set.
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- Cells (2073-4409), 2022, v. 11, n. 9, p. N.PAG, doi. 10.3390/cells11091420
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- Article
Identification of a flavin-containing S-oxygenating monooxygenase involved in alliin biosynthesis in garlic.
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- Plant Journal, 2015, v. 83, n. 6, p. 941, doi. 10.1111/tpj.12954
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- Article
Metabolome-genome-wide association study dissects genetic architecture for generating natural variation in rice secondary metabolism.
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- Plant Journal, 2015, v. 81, n. 1, p. 13, doi. 10.1111/tpj.12681
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- Article
A flavonoid 3- O-glucoside:2″- O-glucosyltransferase responsible for terminal modification of pollen-specific flavonols in Arabidopsis thaliana.
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- Plant Journal, 2014, v. 79, n. 5, p. 769, doi. 10.1111/tpj.12580
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- Article
Direct isolation of flavonoids from plants using ultra-small anatase TiO<sub>2</sub> nanoparticles.
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- Plant Journal, 2014, v. 77, n. 3, p. 443, doi. 10.1111/tpj.12361
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- Article
Enhancement of oxidative and drought tolerance in Arabidopsis by overaccumulation of antioxidant flavonoids.
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- Plant Journal, 2014, v. 77, n. 3, p. 367, doi. 10.1111/tpj.12388
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- Article
Comparative Metabolome and Transcriptome Analyses of Susceptible Asparagus officinalis and Resistant Wild A. kiusianus Reveal Insights into Stem Blight Disease Resistance.
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- Plant & Cell Physiology, 2020, v. 61, n. 8, p. 1464, doi. 10.1093/pcp/pcaa054
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- Article
Jasmonate-Responsive ERF Transcription Factors Regulate Steroidal Glycoalkaloid Biosynthesis in Tomato.
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- Plant & Cell Physiology, 2016, v. 57, n. 5, p. 961, doi. 10.1093/pcp/pcw067
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- Article
P‐207: Late‐News‐Poster: Infrared Down‐conversion of Organic Light Emitting Diode Emission for Medical Use and Vein Authentication.
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- SID Symposium Digest of Technical Papers, 2020, v. 51, n. 1, p. 1676, doi. 10.1002/sdtp.14218
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- Article
Characterization of a recently evolved flavonol-phenylacyltransferase gene provides signatures of natural light selection in Brassicaceae.
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- Nature Communications, 2016, v. 7, n. 8, p. 12399, doi. 10.1038/ncomms12399
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- Article
Metabolic Profiling of Developing Pear Fruits Reveals Dynamic Variation in Primary and Secondary Metabolites, Including Plant Hormones.
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- PLoS ONE, 2015, v. 10, n. 7, p. 1, doi. 10.1371/journal.pone.0131408
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- Article
Metabolomic Evaluation of the Quality of Leaf Lettuce Grown in Practical Plant Factory to Capture Metabolite Signature.
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- Frontiers in Plant Science, 2018, p. N.PAG, doi. 10.3389/fpls.2018.00665
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- Article
Effects of Combined Low Glutathione with Mild Oxidative and Low Phosphorus Stress on the Metabolism of Arabidopsis thaliana.
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- Frontiers in Plant Science, 2017, p. 1, doi. 10.3389/fpls.2017.01464
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- Article
Keeping the shape of plant tissue for visualizing metabolite features in segmentation and correlation analysis of imaging mass spectrometry in Asparagus officinalis.
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- Metabolomics, 2019, v. 15, n. 2, p. 1, doi. 10.1007/s11306-019-1486-5
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- Article
Automation of chemical assignment for identifying molecular formula of S-containing metabolites by combining metabolomics and chemoinformatics with S labeling.
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- Metabolomics, 2016, v. 12, n. 11, p. 1, doi. 10.1007/s11306-016-1115-5
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Assessing metabolomic and chemical diversity of a soybean lineage representing 35 years of breeding.
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- Metabolomics, 2015, v. 11, n. 2, p. 261, doi. 10.1007/s11306-014-0702-6
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- Article
Toward better annotation in plant metabolomics: isolation and structure elucidation of 36 specialized metabolites from Oryza sativa (rice) by using MS/MS and NMR analyses.
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- Metabolomics, 2014, v. 10, n. 4, p. 543, doi. 10.1007/s11306-013-0619-5
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- Article
Seed-coat protective neolignans are produced by the dirigent protein AtDP1 and the laccase AtLAC5 in Arabidopsis.
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- Plant Cell, 2021, v. 33, n. 1, p. 129, doi. 10.1093/plcell/koaa014
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- Article
New otonecine-type pyrrolizidine alkaloid from Petasites japonicus.
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- Journal of Natural Medicines, 2019, v. 73, n. 3, p. 602, doi. 10.1007/s11418-019-01285-9
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- Article
Identification of chemical form of stable carbon released from type 304L and 316L stainless-steel powders in alkaline and acidic solutions under low-oxygen conditions.
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- Radiocarbon, 2018, v. 60, n. 6, p. 1691, doi. 10.1017/RDC.2018.130
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- Article
Gene-Metabolite Network Analysis Revealed Tissue-Specific Accumulation of Therapeutic Metabolites in Mallotus japonicus.
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- International Journal of Molecular Sciences, 2021, v. 22, n. 16, p. 8835, doi. 10.3390/ijms22168835
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- Article
Effects of freeze-drying of samples on metabolite levels in metabolome analyses.
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- Journal of Separation Science, 2011, v. 34, n. 24, p. 3561, doi. 10.1002/jssc.201100466
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- Article
UGT79B31 is responsible for the final modification step of pollen-specific flavonoid biosynthesis in <italic>Petunia hybrida</italic>.
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- Planta: An International Journal of Plant Biology, 2018, v. 247, n. 4, p. 779, doi. 10.1007/s00425-017-2822-5
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- Article
Inhibition of CUTIN DEFICIENT 2 Causes Defects in Cuticle Function and Structure and Metabolite Changes in Tomato Fruit.
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- Plant & Cell Physiology, 2013, v. 54, n. 9, p. 1535, doi. 10.1093/pcp/pct100
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- Article
Coupling Deep Transcriptome Analysis with Untargeted Metabolic Profiling in Ophiorrhiza pumila to Further the Understanding of the Biosynthesis of the Anti-Cancer Alkaloid Camptothecin and Anthraquinones.
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- Plant & Cell Physiology, 2013, v. 54, n. 5, p. 686, doi. 10.1093/pcp/pct040
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- Article
A Highly Specific Genome-Wide Association Study Integrated with Transcriptome Data Reveals the Contribution of Copy Number Variations to Specialized Metabolites in Arabidopsis thaliana Accessions.
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- Molecular Biology & Evolution, 2017, v. 34, n. 12, p. 3111, doi. 10.1093/molbev/msx234
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- Article
Metabolomics for unknown plant metabolites.
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- Analytical & Bioanalytical Chemistry, 2013, v. 405, n. 15, p. 5005, doi. 10.1007/s00216-013-6869-2
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- Article
Biosynthesis of riccionidins and marchantins is regulated by R2R3-MYB transcription factors in Marchantia polymorpha.
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- Journal of Plant Research, 2018, v. 131, n. 5, p. 849, doi. 10.1007/s10265-018-1044-7
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- Article
Expression and functional analyses of a putative phenylcoumaran benzylic ether reductase in Arabidopsis thaliana.
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- Plant Cell Reports, 2016, v. 35, n. 3, p. 513, doi. 10.1007/s00299-015-1899-1
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- Article
Successful expression of a novel bacterial gene for pinoresinol reductase and its effect on lignan biosynthesis in transgenic Arabidopsis thaliana.
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- Applied Microbiology & Biotechnology, 2014, v. 98, n. 19, p. 8165, doi. 10.1007/s00253-014-5934-x
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- Article
Multi-Omics Analysis Decodes Biosynthesis of Specialized Metabolites Constituting the Therapeutic Terrains of Magnolia obovata.
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- International Journal of Molecular Sciences, 2025, v. 26, n. 3, p. 1068, doi. 10.3390/ijms26031068
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- Article
Integrating transcriptome and target metabolome variability in doubled haploids of Allium cepa for abiotic stress protection.
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- Molecular Breeding, 2015, v. 35, n. 10, p. 1, doi. 10.1007/s11032-015-0378-2
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- Article
The Origin and Evolution of Plant Flavonoid Metabolism.
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- Frontiers in Plant Science, 2019, p. 1, doi. 10.3389/fpls.2019.00943
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- Article
Dissection of genotype-phenotype associations in rice grains using metabolome quantitative trait loci analysis.
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- Plant Journal, 2012, v. 70, n. 4, p. 624, doi. 10.1111/j.1365-313X.2012.04903.x
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- Article
Two glycosyltransferases involved in anthocyanin modification delineated by transcriptome independent component analysis in Arabidopsis thaliana.
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- Plant Journal, 2012, v. 69, n. 1, p. 154, doi. 10.1111/j.1365-313X.2011.04779.x
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- Article
Chromosome-level genome assembly of Ophiorrhiza pumila reveals the evolution of camptothecin biosynthesis.
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- Nature Communications, 2021, v. 12, n. 1, p. 1, doi. 10.1038/s41467-020-20508-2
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- Article
Genome-wide association studies identify loci controlling specialized seed metabolites in Arabidopsis.
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- Plant Physiology, 2024, v. 194, n. 3, p. 1705, doi. 10.1093/plphys/kiad511
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- Article
The Structural Integrity of Lignin Is Crucial for Resistance against Striga hermonthica Parasitism in Rice.
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- Plant Physiology, 2019, v. 179, n. 4, p. 1796, doi. 10.1104/pp.18.01133
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- Article
Multiomics in Grape Berry Skin Revealed Specific Induction of the Stilbene Synthetic Pathway by Ultraviolet-C Irradiation.
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- Plant Physiology, 2015, v. 168, n. 1, p. 47, doi. 10.1104/pp.114.254375
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- Article